AT5G52380 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G52380
Description VASCULAR-RELATED NAC-DOMAIN 6
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 1 0.31 -0.32
2 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.84 0.32 -0.3
3 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.83 0.32 -0.32
4 AT3G16810 pumilio 24 pumilio 24, pumilio 24 0.83 0.3 -0.3
5 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.82 0.32 -0.31
6 AT1G80750 Ribosomal protein L30/L7 family protein 0.81 0.33 -0.32
7 AT1G06380 Ribosomal protein L1p/L10e family 0.81 0.32 -0.32
8 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.33 -0.32
9 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.8 0.29 -0.3
10 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.8 0.31 -0.29
11 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.8 0.33 -0.32
12 AT3G02760 Class II aaRS and biotin synthetases superfamily protein 0.79 0.31 -0.33
13 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.78 0.29 -0.3
14 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.78 0.32 -0.31
15 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.78 0.31 -0.32
16 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.78 0.31 -0.32
17 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 0.78 0.32 -0.32
18 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.77 0.29 -0.31
19 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.34 -0.31
20 AT5G22320 Leucine-rich repeat (LRR) family protein 0.76 0.3 -0.32
21 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 0.76 0.32 -0.33
22 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.76 0.31 -0.3
23 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.76 0.31 -0.34
24 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.76 0.31 -0.33
25 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.76 0.31 -0.33
26 AT4G11960 PGR5-like B PGR5-like B -0.75 0.3 -0.3
27 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.75 0.3 -0.34
28 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.74 0.32 -0.31
29 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 0.74 0.29 -0.31
30 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.74 0.33 -0.31
31 AT3G62310 RNA helicase family protein 0.74 0.32 -0.3
32 AT4G00090 Transducin/WD40 repeat-like superfamily protein 0.74 0.29 -0.31
33 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.74 0.33 -0.32
34 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.73 0.3 -0.31
35 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.73 0.3 -0.33
36 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.73 0.32 -0.3
37 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.3 -0.33
38 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.72 0.33 -0.3
39 AT2G26200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.32 -0.32
40 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.71 0.33 -0.33
41 AT5G65900 DEA(D/H)-box RNA helicase family protein 0.71 0.3 -0.34
42 AT2G40660 Nucleic acid-binding, OB-fold-like protein 0.71 0.31 -0.29
43 AT5G19590 Protein of unknown function, DUF538 -0.71 0.3 -0.31
44 AT3G24080 KRR1 family protein 0.71 0.33 -0.32
45 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.71 0.3 -0.31
46 AT1G26370 RNA helicase family protein 0.7 0.33 -0.3
47 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.34
48 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA 0.7 0.33 -0.32
49 AT5G17440 LUC7 related protein 0.7 0.32 -0.31
50 AT5G51280 DEAD-box protein abstrakt, putative 0.7 0.32 -0.31
51 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.32 -0.34
52 AT1G33390 RNA helicase family protein FASCIATED STEM 4, FASCIATED STEM 4 0.7 0.3 -0.32
53 AT2G05120 Nucleoporin, Nup133/Nup155-like 0.7 0.31 -0.33
54 AT5G47540 Mo25 family protein 0.7 0.35 -0.31
55 AT5G17930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.7 0.32 -0.31
56 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.7 0.32 -0.31
57 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.68 0.31 -0.33
58 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.67 0.3 -0.32
59 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.67 0.31 -0.31
60 AT4G22340 cytidinediphosphate diacylglycerol synthase 2 cytidinediphosphate diacylglycerol
synthase 2		 -0.66 0.3 -0.32
61 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.66 0.31 -0.32
62 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.66 0.31 -0.31
63 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 -0.66 0.3 -0.29
64 AT5G01200 Duplicated homeodomain-like superfamily protein -0.65 0.33 -0.32
65 AT1G11310 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 2,
MILDEW RESISTANCE LOCUS O 2,
POWDERY MILDEW RESISTANT 2		 -0.65 0.32 -0.29
66 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.65 0.3 -0.32
67 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.64 0.29 -0.31
68 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 -0.64 0.34 -0.33
69 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.3 -0.32
70 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.63 0.3 -0.31
71 AT1G37000 Beta-galactosidase related protein -0.63 0.32 -0.32
72 AT3G17770 Dihydroxyacetone kinase -0.63 0.29 -0.31
73 AT5G62570 Calmodulin binding protein-like -0.63 0.3 -0.33
74 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 -0.62 0.31 -0.33
75 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.31
76 AT1G66090 Disease resistance protein (TIR-NBS class) -0.61 0.31 -0.3
77 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.61 0.34 -0.33
78 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.61 0.32 -0.3
79 AT5G60800 Heavy metal transport/detoxification superfamily protein -0.61 0.32 -0.32
80 AT5G02290 Protein kinase superfamily protein NAK -0.6 0.31 -0.28
81 AT5G66880 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 SUCROSE NONFERMENTING 1
(SNF1)-RELATED PROTEIN KINASE 2-3,
sucrose nonfermenting
1(SNF1)-related protein kinase
2.3, SRK2I		 -0.6 0.27 -0.31
82 AT3G02290 RING/U-box superfamily protein -0.6 0.31 -0.3
83 AT2G15530 RING/U-box superfamily protein -0.6 0.3 -0.32
84 AT4G19045 Mob1/phocein family protein -0.6 0.31 -0.33
85 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.6 0.34 -0.32
86 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.59 0.31 -0.3
87 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.32 -0.32
88 AT1G13880 ELM2 domain-containing protein -0.59 0.36 -0.32
89 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.59 0.31 -0.32
90 AT1G53060 Legume lectin family protein -0.59 0.3 -0.29
91 AT5G12310 RING/U-box superfamily protein -0.59 0.33 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.72 0.51 -0.43 C0252