AT5G52460 : embryo sac development arrest 41
Query Information
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AGICode AT5G52460
Description FBD, F-box and Leucine Rich Repeat domains containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 1 0.3 -0.31
2 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.74 0.31 -0.31
3 AT2G36320 A20/AN1-like zinc finger family protein -0.7 0.3 -0.32
4 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.7 0.33 -0.31
5 AT1G08320 bZIP transcription factor family protein bZIP21, TGACG (TGA) motif-binding
protein 9		 -0.7 0.31 -0.31
6 AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.3 -0.33
7 AT3G50010 Cysteine/Histidine-rich C1 domain family protein -0.68 0.31 -0.3
8 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 -0.68 0.34 -0.35
9 AT2G43880 Pectin lyase-like superfamily protein -0.67 0.32 -0.31
10 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 -0.67 0.33 -0.31
11 AT1G03070 Bax inhibitor-1 family protein 0.67 0.3 -0.31
12 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 0.67 0.32 -0.32
13 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.34 -0.31
14 AT5G07890 myosin heavy chain-related 0.67 0.3 -0.3
15 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.67 0.31 -0.29
16 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.31 -0.33
17 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 0.66 0.33 -0.31
18 AT2G35790 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1301 (InterPro:IPR009724); Has 116
Blast hits to 116 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses
- 0; Other Eukaryotes - 8 (source: NCBI BLink).		 -0.66 0.29 -0.31
19 AT3G15640 Rubredoxin-like superfamily protein -0.66 0.3 -0.31
20 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 -0.66 0.31 -0.32
21 AT1G52730 Transducin/WD40 repeat-like superfamily protein -0.66 0.31 -0.31
22 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.66 0.31 -0.31
23 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 0.65 0.31 -0.3
24 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.65 0.32 -0.3
25 AT1G07615 GTP-binding protein Obg/CgtA -0.65 0.33 -0.31
26 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.65 0.31 -0.34
27 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 -0.65 0.31 -0.32
28 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 -0.65 0.32 -0.31
29 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.65 0.32 -0.33
30 AT1G30160 Protein of unknown function (DUF295) 0.64 0.34 -0.32
31 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 0.64 0.32 -0.31
32 AT3G13480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.31 -0.32
33 AT1G05720 selenoprotein family protein -0.64 0.33 -0.31
34 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.64 0.32 -0.31
35 AT4G26210 Mitochondrial ATP synthase subunit G protein -0.64 0.3 -0.31
36 AT5G62040 PEBP (phosphatidylethanolamine-binding protein) family
protein		 brother of FT and TFL1 0.64 0.33 -0.33
37 AT1G50250 FTSH protease 1 FTSH protease 1 0.64 0.3 -0.32
38 AT2G43260 F-box and associated interaction domains-containing protein -0.63 0.29 -0.32
39 AT5G13850 nascent polypeptide-associated complex subunit alpha-like
protein 3		 nascent polypeptide-associated
complex subunit alpha-like protein
3		 -0.63 0.33 -0.31
40 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.32 -0.3
41 AT2G15020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits
to 72 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.32
42 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 -0.63 0.31 -0.32
43 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 0.63 0.32 -0.3
44 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B -0.63 0.33 -0.3
45 AT5G58830 Subtilisin-like serine endopeptidase family protein 0.63 0.31 -0.32
46 AT2G46180 golgin candidate 4 golgin candidate 4 0.63 0.3 -0.31
47 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.63 0.29 -0.32
48 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 -0.63 0.29 -0.3
49 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 -0.63 0.3 -0.31
50 AT3G04780 Protein of unknown function (DUF1000) -0.62 0.3 -0.32
51 AT4G12650 Endomembrane protein 70 protein family -0.62 0.32 -0.31
52 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.32
53 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 -0.62 0.3 -0.3
54 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 0.62 0.33 -0.33
55 AT1G71490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.33 -0.31
56 AT4G32050 neurochondrin family protein 0.61 0.32 -0.31
57 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 -0.61 0.33 -0.3
58 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.61 0.3 -0.31
59 AT2G34080 Cysteine proteinases superfamily protein -0.61 0.33 -0.33
60 AT1G19530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl,
root, flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 47 Blast hits to 47 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.31
61 AT1G44990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.61 0.28 -0.33
62 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 -0.61 0.34 -0.33
63 AT3G50110 PTEN 3 Arabidopsis thaliana phosphatase
and TENsin homolog deleted on
chromosome ten 3, PTEN 3,
phosphatase and TENsin homolog
deleted on chromosome ten 2B		 -0.6 0.32 -0.3
64 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 -0.6 0.29 -0.32
65 AT3G57980 DNA-binding bromodomain-containing protein 0.6 0.32 -0.33
66 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 0.6 0.32 -0.31
67 AT5G14030 translocon-associated protein beta (TRAPB) family protein -0.6 0.32 -0.33
68 AT2G37020 Translin family protein -0.6 0.32 -0.31
69 AT3G05500 Rubber elongation factor protein (REF) -0.6 0.31 -0.3
70 AT3G46910 Cullin family protein 0.6 0.3 -0.32
71 AT5G19680 Leucine-rich repeat (LRR) family protein -0.6 0.33 -0.31
72 AT5G66280 GDP-D-mannose 4,6-dehydratase 1 GDP-D-mannose 4,6-dehydratase 1 -0.6 0.31 -0.33
73 AT5G11010 Pre-mRNA cleavage complex II protein family -0.6 0.32 -0.33
74 AT4G09570 calcium-dependent protein kinase 4 ATCPK4, calcium-dependent protein
kinase 4		 -0.6 0.34 -0.34
75 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 0.59 0.31 -0.32
76 AT5G64120 Peroxidase superfamily protein -0.59 0.31 -0.32
77 AT3G05490 ralf-like 22 ralf-like 22 -0.59 0.33 -0.32
78 AT4G15660 Thioredoxin superfamily protein -0.59 0.32 -0.31
79 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.59 0.32 -0.32
80 AT4G05030 Copper transport protein family 0.59 0.34 -0.32
81 AT5G20820 SAUR-like auxin-responsive protein family -0.59 0.33 -0.32
82 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 -0.59 0.32 -0.35
83 AT3G50430 unknown protein; Has 54 Blast hits to 54 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.59 0.3 -0.31
84 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.59 0.33 -0.32
85 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.59 0.32 -0.33
86 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 -0.59 0.32 -0.32
87 AT1G47750 peroxin 11A peroxin 11A -0.59 0.34 -0.31
88 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF 0.58 0.33 -0.3
89 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 0.58 0.29 -0.31
90 AT1G52070 Mannose-binding lectin superfamily protein -0.58 0.36 -0.31
91 AT5G62800 Protein with RING/U-box and TRAF-like domains 0.58 0.33 -0.32
92 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
93 AT4G17905 RING/U-box superfamily protein ATL4H 0.58 0.29 -0.32
94 AT5G45610 protein dimerizations SENSITIVE TO UV 2 0.58 0.33 -0.34
95 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 -0.58 0.31 -0.32
96 AT5G57230 Thioredoxin superfamily protein -0.58 0.32 -0.3
97 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.58 0.33 -0.31
98 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.58 0.32 -0.32
99 AT5G11310 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.31 -0.33
100 AT4G27850 Glycine-rich protein family 0.58 0.29 -0.29
101 AT1G71940 SNARE associated Golgi protein family -0.58 0.33 -0.31
102 AT1G34480 Cysteine/Histidine-rich C1 domain family protein 0.58 0.33 -0.29
103 AT1G70510 KNOTTED-like from Arabidopsis thaliana 2 ARABIDOPSIS THALIANA KN 1,
KNOTTED-like from Arabidopsis
thaliana 2		 0.58 0.31 -0.31
104 AT1G13670 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.3 -0.31
105 AT5G35240 transposable element gene 0.57 0.3 -0.32
106 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.33 -0.29
107 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 0.57 0.34 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		0.74 0.43 -0.44 C0210
109 C0121 Isoheptylglucosinolate - - - -0.72 0.42 -0.45
110 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		0.71 0.44 -0.45 C0109