AGICode | AT5G52130 |
Description | unknown protein; Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G52130 | unknown protein; Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.33 | -0.32 | |||
2 | AT4G04000 | transposable element gene | -0.69 | 0.3 | -0.3 | |||
3 | AT3G20180 | Copper transport protein family | 0.67 | 0.32 | -0.31 | |||
4 | AT5G25570 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.65 | 0.34 | -0.32 | |||
5 | AT3G43690 | transposable element gene | 0.65 | 0.32 | -0.33 | |||
6 | AT2G41570 | transposable element gene | 0.63 | 0.33 | -0.31 | |||
7 | AT3G21380 | Mannose-binding lectin superfamily protein | -0.62 | 0.33 | -0.33 | |||
8 | AT1G68320 | myb domain protein 62 | myb domain protein 62, BW62B, BW62C, myb domain protein 62 |
-0.62 | 0.31 | -0.34 | ||
9 | AT3G49630 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.61 | 0.32 | -0.33 | |||
10 | AT3G60240 | eukaryotic translation initiation factor 4G | CUCUMOVIRUS MULTIPLICATION 2, eukaryotic translation initiation factor 4G |
-0.61 | 0.36 | -0.33 | ||
11 | AT2G03500 | Homeodomain-like superfamily protein | 0.6 | 0.31 | -0.32 | |||
12 | AT5G24860 | flowering promoting factor 1 | ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FLOWERING PROMOTING FACTOR 1 |
-0.59 | 0.3 | -0.32 | ||
13 | AT2G11235 | transposable element gene | 0.59 | 0.29 | -0.32 | |||
14 | AT5G33350 | pseudogene, similar to P0406H10.5, nucleoid DNA-binding protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996; blastp match of 37% identity and 1.5e-57 P-value to GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza sativa (japonica cultivar-group)} |
0.58 | 0.3 | -0.33 | |||
15 | AT1G30795 | Glycine-rich protein family | -0.57 | 0.31 | -0.31 | |||
16 | AT1G30020 | Protein of unknown function, DUF538 | -0.57 | 0.32 | -0.32 | |||
17 | AT2G37000 | TCP family transcription factor | 0.56 | 0.33 | -0.33 | |||
18 | AT1G40390 | DNAse I-like superfamily protein | -0.56 | 0.33 | -0.32 | |||
19 | AT2G28350 | auxin response factor 10 | auxin response factor 10 | 0.56 | 0.31 | -0.3 | ||
20 | AT2G20030 | RING/U-box superfamily protein | -0.55 | 0.31 | -0.3 | |||
21 | AT2G16260 | pseudogene of glycine-rich RNA-binding protein | glycine-rich RNA-binding protein 1 | -0.55 | 0.32 | -0.31 | ||
22 | AT5G46150 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein |
0.54 | 0.31 | -0.32 | |||
23 | AT2G03520 | ureide permease 4 | ureide permease 4, ureide permease 4 |
-0.54 | 0.32 | -0.32 | ||
24 | AT1G04090 | Plant protein of unknown function (DUF946) | 0.54 | 0.31 | -0.31 | |||
25 | AT5G39930 | CLP1-similar protein 5 | CLP1-similar protein 5 | -0.53 | 0.32 | -0.31 | ||
26 | AT5G57200 | ENTH/ANTH/VHS superfamily protein | -0.53 | 0.31 | -0.33 | |||
27 | AT1G14470 | Pentatricopeptide repeat (PPR) superfamily protein | 0.53 | 0.31 | -0.32 | |||
28 | AT1G29110 | Cysteine proteinases superfamily protein | -0.53 | 0.32 | -0.31 | |||
29 | AT3G57850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C globular stage; BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT3G57840.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.31 | -0.31 | |||
30 | AT4G31615 | Transcriptional factor B3 family protein | 0.53 | 0.33 | -0.32 | |||
31 | AT2G03630 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
0.53 | 0.31 | -0.32 | |||
32 | AT4G39756 | Galactose oxidase/kelch repeat superfamily protein | 0.52 | 0.31 | -0.33 | |||
33 | AT1G30810 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
-0.52 | 0.32 | -0.29 | |||
34 | AT2G32350 | Ubiquitin-like superfamily protein | -0.52 | 0.31 | -0.3 | |||
35 | AT3G10460 | Plant self-incompatibility protein S1 family | 0.52 | 0.33 | -0.32 | |||
36 | AT1G67450 | F-box and associated interaction domains-containing protein | -0.52 | 0.3 | -0.33 | |||
37 | AT5G46940 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.52 | 0.31 | -0.32 | |||
38 | AT1G67070 | Mannose-6-phosphate isomerase, type I | DARK INDUCIBLE 9, PHOSPHOMANNOSE ISOMERASE 2 |
-0.52 | 0.32 | -0.31 | ||
39 | AT2G25230 | myb domain protein 100 | myb domain protein 100, myb domain protein 100 |
0.51 | 0.3 | -0.31 | ||
40 | AT5G62320 | myb domain protein 99 | myb domain protein 99, ATMYBCU15, myb domain protein 99 |
-0.51 | 0.33 | -0.29 | ||
41 | AT5G56730 | Insulinase (Peptidase family M16) protein | 0.51 | 0.32 | -0.32 | |||
42 | AT1G02490 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.51 | 0.31 | -0.3 | |||
43 | AT2G42090 | actin 9 | actin 9 | -0.51 | 0.33 | -0.31 | ||
44 | AT1G49930 | BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.32 | -0.32 | |||
45 | AT3G28770 | Protein of unknown function (DUF1216) | 0.51 | 0.31 | -0.31 | |||
46 | AT2G22070 | pentatricopeptide (PPR) repeat-containing protein | 0.51 | 0.3 | -0.31 | |||
47 | AT1G18030 | Protein phosphatase 2C family protein | 0.51 | 0.33 | -0.31 | |||
48 | AT5G47510 | Sec14p-like phosphatidylinositol transfer family protein | 0.5 | 0.33 | -0.32 | |||
49 | AT4G28140 | Integrase-type DNA-binding superfamily protein | -0.5 | 0.34 | -0.32 | |||
50 | AT4G16820 | alpha/beta-Hydrolases superfamily protein | phospholipase A I beta 2 | 0.5 | 0.34 | -0.33 | ||
51 | AT4G09290 | transposable element gene | -0.5 | 0.32 | -0.32 | |||
52 | AT2G17210 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.5 | 0.31 | -0.31 | |||
53 | AT2G25150 | HXXXD-type acyl-transferase family protein | -0.5 | 0.32 | -0.32 | |||
54 | AT3G30220 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits to 30 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.31 | -0.32 | |||
55 | AT3G13680 | F-box and associated interaction domains-containing protein | 0.5 | 0.32 | -0.31 | |||
56 | AT1G68580 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein |
-0.5 | 0.36 | -0.32 | |||
57 | AT1G52580 | RHOMBOID-like protein 5 | RHOMBOID-like protein 5, RHOMBOID-like protein 5 |
-0.49 | 0.32 | -0.32 | ||
58 | AT3G10580 | Homeodomain-like superfamily protein | -0.49 | 0.31 | -0.3 | |||
59 | AT1G80960 | F-box and Leucine Rich Repeat domains containing protein | 0.49 | 0.33 | -0.32 | |||
60 | AT5G28810 | Domain of unknown function (DUF1985) | 0.49 | 0.33 | -0.32 | |||
61 | AT4G01930 | Cysteine/Histidine-rich C1 domain family protein | -0.49 | 0.31 | -0.32 | |||
62 | AT3G15605 | nucleic acid binding | -0.48 | 0.32 | -0.3 | |||
63 | AT2G06950 | transposable element gene | -0.48 | 0.32 | -0.33 | |||
64 | AT1G48390 | RNI-like superfamily protein | 0.48 | 0.31 | -0.32 | |||
65 | AT3G06260 | galacturonosyltransferase-like 4 | galacturonosyltransferase-like 4, galactinol synthase 9 |
0.48 | 0.32 | -0.33 | ||
66 | AT5G37140 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.48 | 0.32 | -0.29 | |||
67 | AT4G20250 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.47 | 0.32 | -0.32 | |||
68 | AT3G30450 | transposable element gene | -0.47 | 0.33 | -0.32 | |||
69 | AT5G41490 | F-box associated ubiquitination effector family protein | 0.46 | 0.33 | -0.31 | |||
70 | AT4G02780 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
ABC33, ARABIDOPSIS THALIANA ENT-COPALYL DIPHOSPHATE SYNTHETASE 1, CPP synthase, ENT-COPALYL DIPHOSPHATE SYNTHETASE 1, GA REQUIRING 1 |
0.46 | 0.32 | -0.31 | ||
71 | AT5G56510 | pumilio 12 | pumilio 12, pumilio 12 | 0.46 | 0.32 | -0.33 | ||
72 | AT5G47850 | CRINKLY4 related 4 | CRINKLY4 related 4 | 0.46 | 0.32 | -0.32 | ||
73 | AT2G02140 | low-molecular-weight cysteine-rich 72 | low-molecular-weight cysteine-rich 72, PDF2.6 |
-0.46 | 0.31 | -0.33 | ||
74 | AT5G59650 | Leucine-rich repeat protein kinase family protein | 0.46 | 0.31 | -0.31 | |||
75 | AT5G48690 | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 7001 Blast hits to 5165 proteins in 492 species: Archae - 9; Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287; Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink). |
0.45 | 0.35 | -0.32 | |||
76 | AT5G42250 | Zinc-binding alcohol dehydrogenase family protein | 0.45 | 0.31 | -0.31 | |||
77 | AT2G33010 | Ubiquitin-associated (UBA) protein | 0.45 | 0.32 | -0.29 |