AGICode | AT5G51280 |
Description | DEAD-box protein abstrakt, putative |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G51280 | DEAD-box protein abstrakt, putative | 1 | 0.32 | -0.32 | |||
2 | AT1G61010 | cleavage and polyadenylation specificity factor 73-I | cleavage and polyadenylation specificity factor 73-I |
0.79 | 0.32 | -0.33 | ||
3 | AT4G11960 | PGR5-like B | PGR5-like B | -0.77 | 0.31 | -0.31 | ||
4 | AT1G16280 | RNA helicase 36 | Arabidopsis thaliana RNA helicase 36, RNA helicase 36, SLOW WALKER 3 |
0.77 | 0.32 | -0.31 | ||
5 | AT4G22380 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.76 | 0.3 | -0.3 | |||
6 | AT3G02760 | Class II aaRS and biotin synthetases superfamily protein | 0.75 | 0.3 | -0.32 | |||
7 | AT2G46030 | ubiquitin-conjugating enzyme 6 | ubiquitin-conjugating enzyme 6 | -0.73 | 0.31 | -0.33 | ||
8 | AT4G37290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.72 | 0.32 | -0.3 | |||
9 | AT2G13540 | ARM repeat superfamily protein | ABA HYPERSENSITIVE 1, ATCBP80, CAP-BINDING PROTEIN 80, ENSALADA |
0.72 | 0.31 | -0.28 | ||
10 | AT1G53035 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.34 | -0.3 | |||
11 | AT1G17360 | BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 9949 Blast hits to 7480 proteins in 576 species: Archae - 12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants - 444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI BLink). |
-0.71 | 0.3 | -0.3 | |||
12 | AT1G01725 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00530.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.3 | -0.31 | |||
13 | AT1G60440 | pantothenate kinase 1 | ATCOAA, pantothenate kinase 1, pantothenate kinase 1 |
-0.71 | 0.31 | -0.32 | ||
14 | AT5G52380 | VASCULAR-RELATED NAC-DOMAIN 6 | 0.7 | 0.29 | -0.32 | |||
15 | AT2G21090 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.7 | 0.32 | -0.31 | |||
16 | AT5G58200 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.7 | 0.31 | -0.31 | |||
17 | AT1G08410 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.7 | 0.31 | -0.34 | |||
18 | AT4G28200 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). |
0.7 | 0.31 | -0.33 | |||
19 | AT5G26830 | Threonyl-tRNA synthetase | 0.69 | 0.28 | -0.3 | |||
20 | AT4G24200 | Transcription elongation factor (TFIIS) family protein | 0.69 | 0.33 | -0.34 | |||
21 | AT1G79380 | Ca(2)-dependent phospholipid-binding protein (Copine) family |
-0.68 | 0.29 | -0.34 | |||
22 | AT4G01897 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). |
-0.68 | 0.33 | -0.34 | |||
23 | AT1G67560 | PLAT/LH2 domain-containing lipoxygenase family protein | Arabidopsis thaliana lipoxygenase 6, lipoxygenase 6 |
-0.67 | 0.33 | -0.31 | ||
24 | AT5G40390 | Raffinose synthase family protein | raffinose synthase 5, seed imbibition 1-like |
0.67 | 0.31 | -0.32 | ||
25 | AT4G19045 | Mob1/phocein family protein | -0.67 | 0.3 | -0.29 | |||
26 | AT5G08550 | GC-rich sequence DNA-binding factor-like protein | increased level of polyploidy1-1D | 0.67 | 0.34 | -0.34 | ||
27 | AT2G26200 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.67 | 0.3 | -0.3 | |||
28 | AT5G15750 | Alpha-L RNA-binding motif/Ribosomal protein S4 family protein |
0.67 | 0.33 | -0.33 | |||
29 | AT4G34630 | unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.67 | 0.3 | -0.32 | |||
30 | AT1G70790 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.67 | 0.33 | -0.32 | |||
31 | AT1G02370 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.67 | 0.32 | -0.32 | |||
32 | AT3G23200 | Uncharacterised protein family (UPF0497) | -0.66 | 0.3 | -0.3 | |||
33 | AT1G25320 | Leucine-rich repeat protein kinase family protein | 0.66 | 0.33 | -0.3 | |||
34 | AT5G23880 | cleavage and polyadenylation specificity factor 100 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100, cleavage and polyadenylation specificity factor 100, EMBRYO DEFECTIVE 1265, ENHANCED SILENCING PHENOTYPE 5 |
0.65 | 0.31 | -0.31 | ||
35 | AT4G23640 | Potassium transporter family protein | ATKT3, KUP4, TINY ROOT HAIR 1 | 0.65 | 0.3 | -0.31 | ||
36 | AT1G05910 | cell division cycle protein 48-related / CDC48-related | 0.65 | 0.32 | -0.31 | |||
37 | AT4G37130 | hydroxyproline-rich glycoprotein family protein | 0.65 | 0.32 | -0.35 | |||
38 | AT5G09740 | histone acetyltransferase of the MYST family 2 | histone acetyltransferase of the MYST family 2 |
-0.65 | 0.31 | -0.32 | ||
39 | AT5G19070 | SNARE associated Golgi protein family | -0.65 | 0.33 | -0.34 | |||
40 | AT4G22340 | cytidinediphosphate diacylglycerol synthase 2 | cytidinediphosphate diacylglycerol synthase 2 |
-0.64 | 0.31 | -0.32 | ||
41 | AT1G66360 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.64 | 0.31 | -0.31 | |||
42 | AT1G16510 | SAUR-like auxin-responsive protein family | 0.64 | 0.31 | -0.32 | |||
43 | AT2G20050 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases |
0.64 | 0.3 | -0.32 | |||
44 | AT2G46580 | Pyridoxamine 5'-phosphate oxidase family protein | -0.64 | 0.3 | -0.3 | |||
45 | AT1G47330 | CBS domain-containing protein with a domain of unknown function (DUF21) |
-0.64 | 0.32 | -0.31 | |||
46 | AT5G47240 | nudix hydrolase homolog 8 | nudix hydrolase homolog 8, nudix hydrolase homolog 8 |
-0.64 | 0.33 | -0.35 | ||
47 | AT5G47400 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.32 | -0.33 | |||
48 | AT4G16130 | arabinose kinase | arabinose kinase, ATISA1, ISA1 | -0.64 | 0.31 | -0.31 | ||
49 | AT2G47250 | RNA helicase family protein | 0.64 | 0.31 | -0.34 | |||
50 | AT5G22950 | SNF7 family protein | VPS24.1 | -0.64 | 0.33 | -0.34 | ||
51 | AT3G45600 | tetraspanin3 | tetraspanin3 | 0.63 | 0.3 | -0.3 | ||
52 | AT1G36990 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). |
0.63 | 0.32 | -0.3 | |||
53 | AT4G10100 | co-factor for nitrate, reductase and xanthine dehydrogenase 7 |
co-factor for nitrate, reductase and xanthine dehydrogenase 7, SIR5 |
-0.63 | 0.32 | -0.32 | ||
54 | AT2G29590 | Thioesterase superfamily protein | -0.63 | 0.32 | -0.34 | |||
55 | AT5G64240 | metacaspase 3 | metacaspase 3, metacaspase 1a, metacaspase 3, metacaspase 1a |
-0.63 | 0.31 | -0.33 | ||
56 | AT1G61150 | LisH and RanBPM domains containing protein | -0.61 | 0.3 | -0.33 | |||
57 | AT4G38260 | Protein of unknown function (DUF833) | -0.61 | 0.32 | -0.33 | |||
58 | AT1G22040 | Galactose oxidase/kelch repeat superfamily protein | -0.61 | 0.31 | -0.3 | |||
59 | AT5G62570 | Calmodulin binding protein-like | -0.61 | 0.33 | -0.33 | |||
60 | AT3G02810 | Protein kinase superfamily protein | -0.61 | 0.32 | -0.32 | |||
61 | AT1G44790 | ChaC-like family protein | -0.61 | 0.3 | -0.29 | |||
62 | AT3G60110 | DNA-binding bromodomain-containing protein | -0.6 | 0.33 | -0.31 | |||
63 | AT1G15400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.6 | 0.32 | -0.3 | |||
64 | AT5G52120 | phloem protein 2-A14 | phloem protein 2-A14, phloem protein 2-A14 |
-0.59 | 0.31 | -0.3 | ||
65 | AT1G75290 | NAD(P)-binding Rossmann-fold superfamily protein | -0.59 | 0.33 | -0.32 |