AT5G50170 : -
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AGICode AT5G50170
Description C2 calcium/lipid-binding and GRAM domain containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein 1 0.3 -0.3
2 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B
0.79 0.34 -0.33
3 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C
-0.78 0.32 -0.31
4 AT5G17620 CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1
(InterPro:IPR010604); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).
-0.78 0.32 -0.32
5 AT3G62590 alpha/beta-Hydrolases superfamily protein 0.78 0.31 -0.33
6 AT5G23550 Got1/Sft2-like vescicle transport protein family -0.78 0.32 -0.3
7 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).
TGN-localized SYP41 interacting
protein
0.78 0.31 -0.3
8 AT3G44380 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family
-0.77 0.31 -0.34
9 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).
-0.77 0.3 -0.31
10 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a -0.77 0.33 -0.33
11 AT3G14080 Small nuclear ribonucleoprotein family protein -0.76 0.32 -0.32
12 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 0.76 0.33 -0.31
13 AT1G20490 AMP-dependent synthetase and ligase family protein 0.74 0.31 -0.31
14 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 0.74 0.32 -0.35
15 AT4G39850 peroxisomal ABC transporter 1 ATP-binding cassette D1, acetate
non-utilizing 2, Arabidopsis
thaliana ATP-binding cassette D1,
COMATOSE, PEROXISOME DEFECTIVE 3,
peroxisomal ABC transporter 1
0.74 0.3 -0.33
16 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 -0.74 0.33 -0.32
17 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.74 0.33 -0.29
18 AT1G24120 ARG1-like 1 ARG1-like 1 -0.73 0.32 -0.3
19 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4
-0.73 0.32 -0.31
20 AT5G06430 Thioredoxin superfamily protein -0.73 0.29 -0.34
21 AT1G48830 Ribosomal protein S7e family protein -0.72 0.31 -0.33
22 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2
-0.72 0.31 -0.32
23 AT5G22850 Eukaryotic aspartyl protease family protein 0.72 0.32 -0.32
24 AT1G36510 Nucleic acid-binding proteins superfamily 0.72 0.29 -0.31
25 AT2G22010 related to KPC1 related to KPC1 0.72 0.33 -0.33
26 AT4G18060 SH3 domain-containing protein -0.72 0.31 -0.3
27 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5
0.72 0.32 -0.31
28 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).
0.71 0.32 -0.32
29 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein
-0.71 0.32 -0.3
30 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.71 0.32 -0.33
31 AT3G62840 Small nuclear ribonucleoprotein family protein -0.71 0.31 -0.32
32 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.7 0.32 -0.34
33 AT1G66370 myb domain protein 113 myb domain protein 113, myb domain
protein 113
0.7 0.33 -0.32
34 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.7 0.32 -0.32
35 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.31 -0.32
36 AT3G43810 calmodulin 7 calmodulin 7 -0.7 0.32 -0.33
37 AT4G18990 xyloglucan endotransglucosylase/hydrolase 29 xyloglucan
endotransglucosylase/hydrolase 29
0.7 0.31 -0.33
38 AT5G22880 histone B2 HISTONE H2B, histone B2 -0.7 0.33 -0.31
39 AT5G10400 Histone superfamily protein -0.7 0.32 -0.32
40 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).
AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819
-0.69 0.32 -0.3
41 AT5G40340 Tudor/PWWP/MBT superfamily protein 0.69 0.31 -0.33
42 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 0.69 0.31 -0.3
43 AT5G09250 ssDNA-binding transcriptional regulator KIWI -0.69 0.32 -0.3
44 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 -0.69 0.32 -0.32
45 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23
-0.69 0.32 -0.33
46 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit
-0.69 0.31 -0.32
47 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1
0.69 0.32 -0.31
48 AT3G20290 EPS15 homology domain 1 EPS15 homology domain 1, EPS15
homology domain 1
0.69 0.32 -0.32
49 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.69 0.31 -0.33
50 AT3G02560 Ribosomal protein S7e family protein -0.69 0.32 -0.32
51 AT5G02540 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.33 -0.28
52 AT5G08565 Transcription initiation Spt4-like protein -0.69 0.3 -0.32
53 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1
-0.68 0.33 -0.3
54 AT3G27360 Histone superfamily protein -0.68 0.31 -0.33
55 AT1G75790 SKU5 similar 18 SKU5 similar 18 0.68 0.32 -0.32
56 AT2G27720 60S acidic ribosomal protein family -0.68 0.32 -0.32
57 AT5G11000 Plant protein of unknown function (DUF868) -0.68 0.31 -0.31
58 AT4G26330 Subtilisin-like serine endopeptidase family protein ATSBT3.18, UNFERTILIZED EMBRYO SAC
17
-0.68 0.32 -0.31
59 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).
0.68 0.32 -0.32
60 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2
-0.68 0.31 -0.32
61 AT5G15770 glucose-6-phosphate acetyltransferase 1 glucose-6-phosphate
acetyltransferase 1,
glucose-6-phosphate
acetyltransferase 1
-0.67 0.32 -0.3
62 AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein
0.67 0.31 -0.3
63 AT1G30825 Arp2/3 complex, 34 kD subunit p34-Arc ACTIN-RELATED PROTEIN C2A,
DISTORTED TRICHOMES 2
-0.67 0.3 -0.3
64 AT2G45570 cytochrome P450, family 76, subfamily C, polypeptide 2 cytochrome P450, family 76,
subfamily C, polypeptide 2
0.67 0.32 -0.3
65 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5
0.67 0.31 -0.31
66 AT1G09815 polymerase delta 4 polymerase delta 4 -0.67 0.32 -0.31
67 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).
0.67 0.31 -0.3
68 AT1G02360 Chitinase family protein -0.67 0.31 -0.31
69 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1
0.67 0.32 -0.31
70 AT1G55160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.67 0.33 -0.29
71 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.67 0.3 -0.32
72 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.67 0.3 -0.32
73 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1
-0.67 0.33 -0.3
74 AT2G23110 Late embryogenesis abundant protein, group 6 0.67 0.32 -0.33
75 AT5G58030 Transport protein particle (TRAPP) component -0.67 0.32 -0.3
76 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.67 0.32 -0.32
77 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).
-0.67 0.31 -0.31
78 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1
0.66 0.33 -0.31
79 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.66 0.32 -0.3
80 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 -0.66 0.33 -0.31
81 AT2G30410 tubulin folding cofactor A (KIESEL) KIESEL, TUBULIN FOLDING FACTOR A -0.66 0.31 -0.3
82 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.31 -0.33
83 AT2G17000 Mechanosensitive ion channel family protein 0.66 0.31 -0.32
84 AT2G27390 proline-rich family protein 0.66 0.32 -0.3
85 AT1G56670 GDSL-like Lipase/Acylhydrolase superfamily protein -0.66 0.33 -0.32
86 AT5G23290 prefoldin 5 prefoldin 5 -0.66 0.29 -0.32
87 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.66 0.32 -0.35
88 AT2G38250 Homeodomain-like superfamily protein 0.66 0.31 -0.33
89 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A
-0.66 0.32 -0.31
90 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 -0.66 0.31 -0.31
91 AT1G65570 Pectin lyase-like superfamily protein -0.65 0.31 -0.31
92 AT2G43260 F-box and associated interaction domains-containing protein -0.65 0.32 -0.3
93 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.65 0.34 -0.3
94 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}
-0.65 0.29 -0.32
95 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.65 0.33 -0.3
96 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.65 0.32 -0.3
97 AT1G11800 endonuclease/exonuclease/phosphatase family protein -0.65 0.32 -0.32
98 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 -0.65 0.31 -0.31
99 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F
-0.65 0.3 -0.33
100 AT1G59560 E3 Ubiquitin ligase family protein DIAP1-like protein 2, ZCF61 -0.65 0.3 -0.31
101 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).
-0.65 0.32 -0.33
102 AT2G46690 SAUR-like auxin-responsive protein family 0.65 0.29 -0.33
103 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).
0.64 0.3 -0.3
104 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.64 0.29 -0.29
105 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related
0.64 0.31 -0.31
106 AT2G46240 BCL-2-associated athanogene 6 ARABIDOPSIS THALIANA
BCL-2-ASSOCIATED ATHANOGENE 6,
BCL-2-associated athanogene 6
0.64 0.32 -0.31
107 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 0.64 0.33 -0.32
108 AT4G34040 RING/U-box superfamily protein 0.64 0.33 -0.33
109 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein
Arabidopsis thaliana C2 domain, C2
domain
0.63 0.31 -0.33
110 AT5G35660 Glycine-rich protein family 0.63 0.32 -0.3
111 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain
0.63 0.31 -0.31
112 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
0.63 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.74 0.44 -0.44
114 C0029 3-Indolylacetonitrile - Indole-3-acetonitrile indole glucosinolate breakdown (insect chewing induced),
IAA biosynthesis I,
camalexin biosynthesis
0.67 0.3 -0.32 C0029