AGICode | AT5G49520 |
Description | WRKY DNA-binding protein 48 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G49520 | WRKY DNA-binding protein 48 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY DNA-binding protein 48 |
1 | 0.33 | -0.3 | ||
2 | AT1G77640 | Integrase-type DNA-binding superfamily protein | 0.73 | 0.31 | -0.32 | |||
3 | AT3G62260 | Protein phosphatase 2C family protein | 0.7 | 0.31 | -0.3 | |||
4 | AT2G25090 | CBL-interacting protein kinase 16 | CBL-interacting protein kinase 16, SNF1-RELATED PROTEIN KINASE 3.18 |
0.69 | 0.32 | -0.32 | ||
5 | AT4G33985 | Protein of unknown function (DUF1685) | 0.69 | 0.33 | -0.3 | |||
6 | AT3G01430 | BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.31 | -0.29 | |||
7 | AT3G49260 | IQ-domain 21 | IQ-domain 21 | -0.68 | 0.3 | -0.31 | ||
8 | AT3G23250 | myb domain protein 15 | MYB DOMAIN PROTEIN 15, ATY19, myb domain protein 15 |
0.67 | 0.32 | -0.31 | ||
9 | AT4G23700 | cation/H+ exchanger 17 | cation/H+ exchanger 17, cation/H+ exchanger 17 |
0.67 | 0.29 | -0.33 | ||
10 | AT1G14920 | GRAS family transcription factor family protein | GIBBERELLIC ACID INSENSITIVE, RESTORATION ON GROWTH ON AMMONIA 2 |
-0.67 | 0.28 | -0.3 | ||
11 | AT1G31410 | putrescine-binding periplasmic protein-related | -0.67 | 0.3 | -0.31 | |||
12 | AT3G23310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
-0.66 | 0.3 | -0.31 | |||
13 | AT1G56500 | haloacid dehalogenase-like hydrolase family protein | -0.66 | 0.34 | -0.31 | |||
14 | AT5G54530 | Protein of unknown function, DUF538 | -0.66 | 0.32 | -0.35 | |||
15 | AT1G35140 | Phosphate-responsive 1 family protein | EXORDIUM like 1, PHOSPHATE-INDUCED 1 |
0.66 | 0.33 | -0.33 | ||
16 | AT3G08680 | Leucine-rich repeat protein kinase family protein | -0.66 | 0.34 | -0.3 | |||
17 | AT1G79870 | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
-0.65 | 0.32 | -0.3 | |||
18 | AT3G55260 | beta-hexosaminidase 1 | ATHEX2, beta-hexosaminidase 1 | -0.65 | 0.32 | -0.33 | ||
19 | AT1G14740 | Protein of unknown function (DUF1423) | 0.65 | 0.33 | -0.3 | |||
20 | AT5G57250 | Pentatricopeptide repeat (PPR) superfamily protein | -0.65 | 0.31 | -0.35 | |||
21 | AT1G74530 | unknown protein; Has 49 Blast hits to 49 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.65 | 0.3 | -0.31 | |||
22 | AT5G50180 | Protein kinase superfamily protein | -0.64 | 0.29 | -0.31 | |||
23 | AT4G22580 | Exostosin family protein | -0.64 | 0.31 | -0.33 | |||
24 | AT2G31990 | Exostosin family protein | 0.64 | 0.3 | -0.31 | |||
25 | AT4G30430 | tetraspanin9 | tetraspanin9 | 0.64 | 0.32 | -0.32 | ||
26 | AT5G07100 | WRKY DNA-binding protein 26 | WRKY DNA-binding protein 26 | 0.64 | 0.31 | -0.32 | ||
27 | AT3G20670 | histone H2A 13 | histone H2A 13 | -0.64 | 0.32 | -0.33 | ||
28 | AT2G39710 | Eukaryotic aspartyl protease family protein | 0.64 | 0.3 | -0.3 | |||
29 | AT4G35950 | RAC-like 6 | RAC-like 6, ATRAC6, RHO-RELATED PROTEIN FROM PLANTS 5, RAC-like 2, RAC-like 6, ROP5 |
-0.64 | 0.32 | -0.3 | ||
30 | AT3G27210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
0.63 | 0.3 | -0.31 | |||
31 | AT2G45220 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.63 | 0.33 | -0.32 | |||
32 | AT3G50790 | esterase/lipase/thioesterase family protein | -0.63 | 0.32 | -0.32 | |||
33 | AT3G54690 | Sugar isomerase (SIS) family protein | SETH3 | -0.63 | 0.31 | -0.31 | ||
34 | AT4G33300 | ADR1-like 1 | ADR1-like 1 | 0.63 | 0.33 | -0.32 | ||
35 | AT3G02720 | Class I glutamine amidotransferase-like superfamily protein | -0.62 | 0.3 | -0.31 | |||
36 | AT5G09800 | ARM repeat superfamily protein | 0.62 | 0.31 | -0.32 | |||
37 | AT5G53450 | OBP3-responsive gene 1 | OBP3-responsive gene 1 | -0.62 | 0.3 | -0.32 | ||
38 | AT2G41660 | Protein of unknown function, DUF617 | mizu-kussei 1 | 0.62 | 0.3 | -0.3 | ||
39 | AT4G21120 | amino acid transporter 1 | amino acid transporter 1, CATIONIC AMINO ACID TRANSPORTER 1 |
0.62 | 0.32 | -0.3 | ||
40 | AT2G42800 | receptor like protein 29 | receptor like protein 29, receptor like protein 29 |
-0.62 | 0.32 | -0.31 | ||
41 | AT2G01870 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.31 | -0.33 | |||
42 | AT1G61900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast hits to 65 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.29 | -0.32 | |||
43 | AT2G30040 | mitogen-activated protein kinase kinase kinase 14 | mitogen-activated protein kinase kinase kinase 14 |
0.62 | 0.31 | -0.32 | ||
44 | AT3G53730 | Histone superfamily protein | -0.61 | 0.31 | -0.29 | |||
45 | AT4G32650 | potassium channel in Arabidopsis thaliana 3 | ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, A. thaliana low-K+-tolerant 1, potassium channel in Arabidopsis thaliana 3, KC1 |
0.61 | 0.31 | -0.31 | ||
46 | AT1G71695 | Peroxidase superfamily protein | -0.61 | 0.31 | -0.32 | |||
47 | AT1G05150 | Calcium-binding tetratricopeptide family protein | -0.61 | 0.32 | -0.32 | |||
48 | AT1G78170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.32 | |||
49 | AT1G56590 | Clathrin adaptor complexes medium subunit family protein | ZIG SUPPRESSOR 4 | -0.6 | 0.32 | -0.31 | ||
50 | AT5G39670 | Calcium-binding EF-hand family protein | 0.6 | 0.32 | -0.32 | |||
51 | AT3G63010 | alpha/beta-Hydrolases superfamily protein | ATGID1B, GA INSENSITIVE DWARF1B | 0.6 | 0.33 | -0.33 | ||
52 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
0.6 | 0.3 | -0.32 | ||
53 | AT5G19370 | rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein |
-0.6 | 0.31 | -0.32 | |||
54 | AT1G48050 | Ku80 family protein | ARABIDOPSIS THALIANA KU80 HOMOLOG, KU80 |
-0.6 | 0.32 | -0.34 | ||
55 | AT3G26440 | Protein of unknown function (DUF707) | 0.6 | 0.31 | -0.3 | |||
56 | AT3G13490 | Lysyl-tRNA synthetase, class II | ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 2, OVULE ABORTION 5 |
-0.6 | 0.31 | -0.31 | ||
57 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
-0.59 | 0.32 | -0.31 | |||
58 | AT3G46690 | UDP-Glycosyltransferase superfamily protein | 0.59 | 0.32 | -0.29 | |||
59 | AT3G16850 | Pectin lyase-like superfamily protein | -0.59 | 0.33 | -0.31 | |||
60 | AT1G60460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.31 | |||
61 | AT1G79790 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
Arabidopsis thaliana chloroplast FMN hydrolase 1, flavin mononucleotide hydrolase 1 |
-0.59 | 0.32 | -0.32 | ||
62 | AT1G14780 | MAC/Perforin domain-containing protein | 0.59 | 0.32 | -0.33 | |||
63 | AT1G53230 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 |
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 |
-0.59 | 0.33 | -0.33 | ||
64 | AT2G32100 | ovate family protein 16 | RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, ovate family protein 16 |
-0.59 | 0.33 | -0.3 | ||
65 | AT1G58420 | Uncharacterised conserved protein UCP031279 | 0.59 | 0.31 | -0.33 | |||
66 | AT3G02240 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 7 | 0.59 | 0.34 | -0.31 | ||
67 | AT3G11050 | ferritin 2 | ferritin 2, ferritin 2 | 0.58 | 0.31 | -0.32 | ||
68 | AT5G46050 | peptide transporter 3 | ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, peptide transporter 3 |
0.58 | 0.31 | -0.31 | ||
69 | AT1G30700 | FAD-binding Berberine family protein | 0.58 | 0.31 | -0.31 | |||
70 | AT5G03760 | Nucleotide-diphospho-sugar transferases superfamily protein | ATCSLA09, ATCSLA9, CSLA09, CELLULOSE SYNTHASE LIKE A9, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 |
-0.58 | 0.34 | -0.31 | ||
71 | AT3G16030 | lectin protein kinase family protein | CALLUS EXPRESSION OF RBCS 101 | 0.58 | 0.3 | -0.29 | ||
72 | AT5G11280 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.31 | -0.33 | |||
73 | AT5G25360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.58 | 0.32 | -0.29 | |||
74 | AT4G20760 | NAD(P)-binding Rossmann-fold superfamily protein | -0.58 | 0.32 | -0.31 | |||
75 | AT3G01680 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
sieve element occlusion b, Sieve-Element-Occlusion-Related 1 |
-0.58 | 0.32 | -0.3 | ||
76 | AT3G21420 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
LATERAL BRANCHING OXIDOREDUCTASE 1 | 0.58 | 0.3 | -0.34 | ||
77 | AT1G14570 | UBX domain-containing protein | -0.57 | 0.31 | -0.31 | |||
78 | AT2G38580 | Mitochondrial ATP synthase D chain-related protein | -0.57 | 0.31 | -0.31 | |||
79 | AT3G22930 | calmodulin-like 11 | calmodulin-like 11 | 0.57 | 0.3 | -0.32 | ||
80 | AT1G12850 | Phosphoglycerate mutase family protein | -0.57 | 0.34 | -0.32 | |||
81 | AT5G40270 | HD domain-containing metal-dependent phosphohydrolase family protein |
-0.57 | 0.32 | -0.31 | |||
82 | AT4G13660 | pinoresinol reductase 2 | ATPRR2, pinoresinol reductase 2 | 0.57 | 0.32 | -0.31 | ||
83 | AT5G63440 | Protein of unknown function (DUF167) | -0.57 | 0.31 | -0.31 | |||
84 | AT5G48520 | unknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). |
AtAUG3, augmin 3 | -0.57 | 0.33 | -0.29 | ||
85 | AT2G37585 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.57 | 0.31 | -0.32 | |||
86 | AT3G12920 | SBP (S-ribonuclease binding protein) family protein | BOI-related gene 3 | -0.57 | 0.32 | -0.34 | ||
87 | AT5G58940 | calmodulin-binding receptor-like cytoplasmic kinase 1 | calmodulin-binding receptor-like cytoplasmic kinase 1 |
0.56 | 0.3 | -0.31 | ||
88 | AT4G33580 | beta carbonic anhydrase 5 | A. THALIANA BETA CARBONIC ANHYDRASE 5, beta carbonic anhydrase 5 |
-0.56 | 0.3 | -0.31 | ||
89 | AT1G35230 | arabinogalactan protein 5 | arabinogalactan protein 5 | 0.56 | 0.33 | -0.32 | ||
90 | AT2G17300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.34 | -0.3 | |||
91 | AT1G26650 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.29 | -0.31 | |||
92 | ATMG00060 | NADH dehydrogenase subunit 5C | NADH DEHYDROGENASE SUBUNIT 5, NADH DEHYDROGENASE SUBUNIT 5.3, NADH dehydrogenase subunit 5C |
0.56 | 0.29 | -0.32 | ||
93 | AT4G36960 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.56 | 0.31 | -0.34 | |||
94 | AT4G22490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.56 | 0.31 | -0.34 | |||
95 | AT5G45380 | solute:sodium symporters;urea transmembrane transporters | ATDUR3, DEGRADATION OF UREA 3 | 0.56 | 0.29 | -0.32 | ||
96 | AT3G11700 | FASCICLIN-like arabinogalactan protein 18 precursor | FASCICLIN-like arabinogalactan protein 18 precursor |
-0.56 | 0.32 | -0.32 | ||
97 | AT4G21700 | Protein of unknown function (DUF2921) | 0.55 | 0.32 | -0.31 | |||
98 | AT5G62480 | glutathione S-transferase tau 9 | glutathione S-transferase tau 9, GLUTATHIONE S-TRANSFERASE 14, GLUTATHIONE S-TRANSFERASE 14B, glutathione S-transferase tau 9 |
0.55 | 0.3 | -0.32 | ||
99 | AT3G53210 | nodulin MtN21 /EamA-like transporter family protein | 0.53 | 0.31 | -0.32 | |||
100 | AT3G12830 | SAUR-like auxin-responsive protein family | 0.53 | 0.3 | -0.31 | |||
101 | AT1G33760 | Integrase-type DNA-binding superfamily protein | 0.53 | 0.3 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
102 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.63 | 0.44 | -0.43 | ||
103 | C0231 | Serine | D,L-Serine | D-Serine; L-Serine | sphingolipid biosynthesis (plants), folate polyglutamylation, tryptophan biosynthesis, phospholipid biosynthesis II, homocysteine and cysteine interconversion, photorespiration, seleno-amino acid biosynthesis, glycine biosynthesis, tRNA charging, serine racemization, phosphatidylethanolamine biosynthesis I, serine biosynthesis, choline biosynthesis I, cysteine biosynthesis I, folate transformations II |
0.55 | 0.33 | -0.31 |