AT5G49560 : -
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AGICode AT5G49560
Description Putative methyltransferase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G49560 Putative methyltransferase family protein 1 0.32 -0.33
2 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.86 0.3 -0.31
3 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein
0.86 0.34 -0.32
4 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2
-0.86 0.33 -0.33
5 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1
-0.86 0.32 -0.34
6 AT3G58700 Ribosomal L5P family protein 0.85 0.32 -0.32
7 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN
0.85 0.3 -0.32
8 AT1G50920 Nucleolar GTP-binding protein 0.85 0.29 -0.31
9 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative
0.83 0.31 -0.33
10 AT5G22440 Ribosomal protein L1p/L10e family 0.83 0.34 -0.32
11 AT1G06900 Insulinase (Peptidase family M16) family protein 0.83 0.31 -0.31
12 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.83 0.3 -0.32
13 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.83 0.3 -0.33
14 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57
0.82 0.29 -0.33
15 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3
0.82 0.3 -0.33
16 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.82 0.3 -0.31
17 AT5G20600 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: preribosome, small subunit
precursor; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits
to 530 proteins in 201 species: Archae - 0; Bacteria - 10;
Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).
0.82 0.32 -0.31
18 AT1G60850 DNA-directed RNA polymerase family protein AAC42, ATRPAC42 0.81 0.33 -0.3
19 AT1G80750 Ribosomal protein L30/L7 family protein 0.81 0.33 -0.32
20 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.81 0.31 -0.3
21 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.81 0.29 -0.3
22 AT1G08360 Ribosomal protein L1p/L10e family 0.81 0.33 -0.31
23 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 0.8 0.32 -0.29
24 AT1G25260 Ribosomal protein L10 family protein 0.8 0.33 -0.31
25 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.8 0.32 -0.31
26 AT3G22660 rRNA processing protein-related 0.8 0.29 -0.31
27 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).
-0.8 0.3 -0.31
28 AT5G14520 pescadillo-related 0.8 0.32 -0.28
29 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.79 0.29 -0.32
30 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 0.79 0.32 -0.31
31 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28
-0.79 0.32 -0.3
32 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.79 0.31 -0.32
33 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2
0.79 0.3 -0.32
34 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).
0.79 0.33 -0.33
35 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
0.79 0.31 -0.31
36 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2
0.79 0.32 -0.32
37 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.79 0.31 -0.3
38 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.79 0.32 -0.33
39 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10
0.78 0.32 -0.33
40 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1
0.78 0.32 -0.32
41 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein
-0.78 0.31 -0.33
42 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein
-0.78 0.33 -0.32
43 AT4G32720 La protein 1 La protein 1, La protein 1 0.78 0.32 -0.32
44 AT5G65840 Thioredoxin superfamily protein -0.78 0.3 -0.28
45 AT1G03830 guanylate-binding family protein 0.78 0.31 -0.32
46 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3
0.78 0.3 -0.3
47 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).
-0.78 0.32 -0.32
48 AT5G62440 Protein of unknown function (DUF3223) 0.78 0.33 -0.32
49 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.78 0.3 -0.3
50 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.77 0.32 -0.31
51 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8
-0.77 0.31 -0.31
52 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.77 0.31 -0.31
53 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.77 0.31 -0.35
54 AT1G66900 alpha/beta-Hydrolases superfamily protein -0.77 0.29 -0.32
55 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
-0.77 0.33 -0.33
56 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.77 0.31 -0.32
57 AT1G06380 Ribosomal protein L1p/L10e family 0.77 0.31 -0.31
58 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.77 0.32 -0.29
59 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain
0.77 0.32 -0.32
60 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
-0.77 0.29 -0.32
61 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.77 0.32 -0.31
62 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family
-0.76 0.29 -0.31
63 AT3G23940 dehydratase family 0.76 0.3 -0.31
64 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8
0.76 0.33 -0.29
65 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type
-0.76 0.33 -0.31
66 AT4G11960 PGR5-like B PGR5-like B -0.76 0.33 -0.32
67 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.76 0.32 -0.31
68 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.35
69 AT5G64420 DNA polymerase V family 0.76 0.33 -0.3
70 AT1G60080 3'-5'-exoribonuclease family protein 0.76 0.32 -0.31
71 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.76 0.32 -0.31
72 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.31 -0.31
73 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.76 0.31 -0.32
74 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.76 0.33 -0.32
75 AT5G65860 ankyrin repeat family protein 0.76 0.34 -0.33
76 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
-0.76 0.32 -0.32
77 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.75 0.31 -0.33
78 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.75 0.29 -0.32
79 AT3G19620 Glycosyl hydrolase family protein -0.75 0.32 -0.3
80 AT2G40660 Nucleic acid-binding, OB-fold-like protein 0.75 0.3 -0.32
81 AT1G61570 translocase of the inner mitochondrial membrane 13 translocase of the inner
mitochondrial membrane 13
0.75 0.34 -0.33
82 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20
-0.75 0.3 -0.29
83 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.31 -0.32
84 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2
0.75 0.32 -0.3
85 AT5G02790 Glutathione S-transferase family protein Glutathione transferase L3 -0.75 0.32 -0.3
86 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.75 0.35 -0.32
87 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.75 0.31 -0.37
88 AT4G37000 accelerated cell death 2 (ACD2) ACCELERATED CELL DEATH 2,
ARABIDOPSIS THALIANA RED
CHLOROPHYLL CATABOLITE REDUCTASE
-0.75 0.31 -0.33
89 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.74 0.34 -0.3
90 AT3G15840 post-illumination chlorophyll fluorescence increase post-illumination chlorophyll
fluorescence increase
-0.74 0.32 -0.31
91 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 0.74 0.31 -0.3
92 AT5G45780 Leucine-rich repeat protein kinase family protein 0.74 0.33 -0.31
93 AT4G17470 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.31
94 AT1G06560 NOL1/NOP2/sun family protein 0.74 0.3 -0.31
95 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.74 0.31 -0.32
96 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative
ovule abortion 9 0.74 0.32 -0.3
97 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 -0.74 0.31 -0.31
98 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.74 0.32 -0.29
99 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2
0.74 0.33 -0.31
100 AT1G07770 ribosomal protein S15A ribosomal protein S15A 0.74 0.3 -0.34
101 AT1G72550 tRNA synthetase beta subunit family protein 0.74 0.3 -0.32
102 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.74 0.31 -0.31
103 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin -0.73 0.32 -0.28
104 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.73 0.31 -0.32
105 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.73 0.31 -0.32
106 AT5G37670 HSP20-like chaperones superfamily protein -0.73 0.3 -0.34
107 AT5G38895 RING/U-box superfamily protein -0.73 0.34 -0.33
108 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.72 0.33 -0.31
109 AT1G77930 Chaperone DnaJ-domain superfamily protein -0.72 0.31 -0.33
110 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein
-0.72 0.32 -0.32
111 AT4G29070 Phospholipase A2 family protein -0.72 0.31 -0.33
112 AT2G23840 HNH endonuclease -0.72 0.31 -0.3
113 AT5G19590 Protein of unknown function, DUF538 -0.72 0.31 -0.3
114 AT3G45140 lipoxygenase 2 ARABIODOPSIS THALIANA LIPOXYGENASE
2, lipoxygenase 2
-0.72 0.32 -0.33
115 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
-0.72 0.34 -0.3
116 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2
-0.72 0.31 -0.32
117 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1
-0.72 0.3 -0.31
118 AT1G73040 Mannose-binding lectin superfamily protein -0.72 0.34 -0.31
119 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.72 0.32 -0.31
120 AT2G42750 DNAJ heat shock N-terminal domain-containing protein -0.71 0.33 -0.31
121 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase
-0.71 0.31 -0.32
122 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.71 0.33 -0.32
123 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2
-0.71 0.33 -0.31
124 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2
-0.71 0.32 -0.31
125 AT2G20920 Protein of unknown function (DUF3353) -0.71 0.32 -0.31
126 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
-0.71 0.32 -0.33
127 AT5G01200 Duplicated homeodomain-like superfamily protein -0.7 0.32 -0.33
128 AT5G17520 root cap 1 (RCP1) MALTOSE EXCESS 1, ROOT CAP 1 -0.7 0.32 -0.31
129 AT2G15310 ADP-ribosylation factor B1A ADP-ribosylation factor B1A,
ADP-ribosylation factor B1A
-0.7 0.31 -0.34
130 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 -0.7 0.3 -0.33
131 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein
LIKE SEX4 2 -0.7 0.32 -0.3
132 AT5G45350 proline-rich family protein -0.7 0.31 -0.31
133 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).
-0.7 0.31 -0.3
134 AT2G42950 Magnesium transporter CorA-like family protein -0.7 0.34 -0.31
135 AT1G76020 Thioredoxin superfamily protein -0.7 0.32 -0.3
136 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.7 0.31 -0.3
137 AT4G14020 Rapid alkalinization factor (RALF) family protein -0.7 0.31 -0.34
138 AT2G19780 Leucine-rich repeat (LRR) family protein -0.7 0.29 -0.31
139 AT5G15860 prenylcysteine methylesterase prenylcysteine methylesterase,
Isoprenylcysteine methylesterase,
prenylcysteine methylesterase
-0.7 0.32 -0.32
140 AT4G23600 Tyrosine transaminase family protein CORONATINE INDUCED 1, JASMONIC
ACID RESPONSIVE 2
-0.7 0.34 -0.31
141 AT5G27280 Zim17-type zinc finger protein -0.7 0.31 -0.31
142 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
-0.69 0.33 -0.33
143 AT1G52000 Mannose-binding lectin superfamily protein -0.69 0.31 -0.31
144 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2
-0.69 0.29 -0.32
145 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein
-0.69 0.33 -0.32
146 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.69 0.33 -0.36
147 AT5G41210 glutathione S-transferase THETA 1 glutathione S-transferase THETA 1,
GST10, glutathione S-transferase
THETA 1
-0.69 0.31 -0.31
148 AT4G25650 ACD1-like ACD1-like,
PROTOCHLOROPHYLLIDE-DEPENDENT
TRANSLOCON COMPONENT, 52 KDA,
TRANSLOCON AT THE INNER ENVELOPE
MEMBRANE OF CHLOROPLASTS, 55 KDA -
IV
-0.68 0.32 -0.3
149 AT1G52400 beta glucosidase 18 A. THALIANA BETA-GLUCOSIDASE 1,
BETA-GLUCOSIDASE HOMOLOG 1, beta
glucosidase 18
-0.68 0.32 -0.31
150 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
SEEDLING PLASTID DEVELOPMENT 1 -0.68 0.31 -0.31
151 AT3G14067 Subtilase family protein -0.68 0.3 -0.31
152 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.68 0.35 -0.29
153 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase
-0.68 0.33 -0.34
154 AT5G02620 ankyrin-like1 ankyrin-like1, ATANK1 -0.68 0.32 -0.31
155 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 -0.68 0.33 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
156 C0158 MST_1480.5 - - - -0.68 0.45 -0.48