AT5G48600 : ARABIDOPSIS THALIANA CHROMOSOME ASSOCIATED PROTEIN-C.....
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AGICode AT5G48600
Description structural maintenance of chromosome 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G48600 structural maintenance of chromosome 3 ARABIDOPSIS THALIANA CHROMOSOME
ASSOCIATED PROTEIN-C, structural
maintenance of chromosome 3,
ARABIDOPSIS THALIANA STRUCTURAL
MAINTENANCE OF CHROMOSOME 4,
structural maintenance of
chromosome 3
1 0.3 -0.3
2 AT5G48360 Actin-binding FH2 (formin homology 2) family protein 0.8 0.29 -0.31
3 AT1G30600 Subtilase family protein 0.78 0.33 -0.32
4 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.78 0.33 -0.32
5 AT4G03010 RNI-like superfamily protein 0.77 0.3 -0.32
6 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.77 0.32 -0.31
7 AT1G66200 glutamine synthase clone F11 glutamine synthase clone F11,
glutamine synthetase 1;2,
glutamine synthase clone F11
-0.76 0.3 -0.32
8 AT2G43820 UDP-glucosyltransferase 74F2 Arabidopsis thaliana salicylic
acid glucosyltransferase 1, GT,
salicylic acid glucosyltransferase
1, UDP-glucose:salicylic acid
glucosyltransferase 1,
UDP-glucosyltransferase 74F2
-0.76 0.3 -0.3
9 AT1G65520 delta(3), delta(2)-enoyl CoA isomerase 1 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 1,
ENOYL-COA HYDRATASE/ISOMERASE C,
delta(3), delta(2)-enoyl CoA
isomerase 1, PEC11
-0.75 0.29 -0.32
10 AT1G78430 ROP interactive partner 2 ROP interactive partner 2 0.75 0.3 -0.32
11 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4
-0.75 0.31 -0.31
12 AT4G14430 indole-3-butyric acid response 10 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 2,
ENOYL-COA HYDRATASE/ISOMERASE B,
DELTA(3), DELTA(2)-ENOYL COA
ISOMERASE 2, indole-3-butyric acid
response 10, PEC12
-0.75 0.33 -0.32
13 AT5G34930 arogenate dehydrogenase -0.75 0.33 -0.31
14 AT1G18370 ATP binding microtubule motor family protein ARABIDOPSIS NPK1-ACTIVATING
KINESIN 1, HINKEL, NPK1-ACTIVATING
KINESIN 1
0.74 0.33 -0.3
15 AT5G63680 Pyruvate kinase family protein -0.74 0.31 -0.3
16 AT2G23090 Uncharacterised protein family SERF -0.74 0.31 -0.3
17 AT2G37110 PLAC8 family protein -0.73 0.31 -0.3
18 AT5G58800 Quinone reductase family protein -0.73 0.33 -0.31
19 AT1G77670 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein
-0.73 0.32 -0.33
20 AT3G12620 Protein phosphatase 2C family protein -0.73 0.3 -0.32
21 AT2G39780 ribonuclease 2 ribonuclease 2 -0.73 0.29 -0.33
22 AT4G24610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G65440.1); Has 820 Blast
hits to 264 proteins in 74 species: Archae - 0; Bacteria -
15; Metazoa - 77; Fungi - 83; Plants - 96; Viruses - 0;
Other Eukaryotes - 549 (source: NCBI BLink).
0.72 0.32 -0.31
23 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein
ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29
-0.72 0.3 -0.32
24 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.72 0.33 -0.33
25 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein -0.72 0.33 -0.31
26 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).
-0.72 0.34 -0.31
27 AT3G47833 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits
to 42 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
succinate dehydrogenase 7,
succinate dehydrogenase 7A
-0.71 0.32 -0.31
28 AT2G04900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF423
(InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins
in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118;
Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes -
136 (source: NCBI BLink).
-0.71 0.29 -0.3
29 AT4G33400 Vacuolar import/degradation, Vid27-related protein 0.71 0.32 -0.29
30 AT5G11680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, plasma
membrane; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
WW-domain-binding protein (InterPro:IPR018826); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
-0.71 0.31 -0.33
31 AT1G01490 Heavy metal transport/detoxification superfamily protein -0.71 0.32 -0.32
32 AT4G21820 binding;calmodulin binding 0.71 0.31 -0.32
33 AT3G56370 Leucine-rich repeat protein kinase family protein 0.71 0.32 -0.3
34 AT2G48090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, root, flower,
carpel; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.7 0.34 -0.3
35 AT1G79810 Pex2/Pex12 N-terminal domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein
ARABIDOPSIS PEROXIN 2, PEROXIN 2,
REVERSAL OF THE DET PHENOTYPE 3
-0.7 0.34 -0.32
36 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED 0.7 0.31 -0.33
37 AT3G60900 FASCICLIN-like arabinogalactan-protein 10 FASCICLIN-like
arabinogalactan-protein 10
0.7 0.31 -0.29
38 AT5G40650 succinate dehydrogenase 2-2 succinate dehydrogenase 2-2 -0.7 0.34 -0.33
39 AT4G32470 Cytochrome bd ubiquinol oxidase, 14kDa subunit -0.7 0.32 -0.31
40 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1
0.69 0.3 -0.32
41 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42
-0.69 0.32 -0.32
42 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein
-0.69 0.33 -0.32
43 AT5G42850 Thioredoxin superfamily protein -0.69 0.36 -0.33
44 AT2G30330 GCN5L1 family protein BLOC subunit 1 -0.69 0.32 -0.31
45 AT5G62575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G47833.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
succinate dehydrogenase 7,
succinate dehydrogenase 7B
-0.69 0.31 -0.32
46 AT1G12840 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit
/ vacuolar proton pump C subunit (DET3)
ARABIDOPSIS THALIANA VACUOLAR ATP
SYNTHASE SUBUNIT C, DE-ETIOLATED 3
-0.69 0.33 -0.32
47 AT5G11970 Protein of unknown function (DUF3511) -0.69 0.32 -0.31
48 AT2G27190 purple acid phosphatase 12 ARABIDOPSIS THALIANA PURPLE ACID
PHOSPHATASE 1, PURPLE ACID
PHOSPHATASE 12, PURPLE ACID
PHOSPHATASE 1, purple acid
phosphatase 12
-0.69 0.32 -0.31
49 AT2G34690 Glycolipid transfer protein (GLTP) family protein ACCELERATED CELL DEATH 11 -0.69 0.3 -0.31
50 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase
-0.68 0.33 -0.32
51 AT5G16780 SART-1 family DEFECTIVELY ORGANIZED TRIBUTARIES
2, MERISTEM-DEFECTIVE
0.68 0.33 -0.32
52 AT5G27350 Major facilitator superfamily protein SFP1 -0.68 0.33 -0.32
53 AT5G12210 RAB geranylgeranyl transferase beta subunit 1 RAB geranylgeranyl transferase
beta subunit 1, RAB geranylgeranyl
transferase beta subunit 1
-0.68 0.33 -0.32
54 AT2G32590 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits
to 447 proteins in 202 species: Archae - 0; Bacteria - 4;
Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other
Eukaryotes - 108 (source: NCBI BLink).
EMBRYO DEFECTIVE 2795 0.68 0.31 -0.32
55 AT1G02220 NAC domain containing protein 3 NAC domain containing protein 3,
NAC domain containing protein 3
-0.68 0.3 -0.31
56 AT4G02620 vacuolar ATPase subunit F family protein -0.68 0.31 -0.33
57 AT2G24230 Leucine-rich repeat protein kinase family protein 0.68 0.3 -0.33
58 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 -0.68 0.31 -0.31
59 AT3G54620 basic leucine zipper 25 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 25, basic leucine zipper
25, BASIC LEUCINE ZIPPER O2
HOMOLOG 4
-0.68 0.31 -0.31
60 AT1G18680 HNH endonuclease domain-containing protein -0.68 0.33 -0.32
61 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein
-0.68 0.32 -0.31
62 AT4G03960 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP4, plant and fungi
atypical dual-specificity
phosphatase 4
-0.68 0.31 -0.32
63 AT4G02010 Protein kinase superfamily protein 0.68 0.29 -0.31
64 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).
0.68 0.33 -0.32
65 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1
-0.68 0.31 -0.32
66 AT1G24350 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein
-0.68 0.33 -0.29
67 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).
0.68 0.32 -0.31
68 AT4G30500 Protein of unknown function (DUF788) -0.68 0.29 -0.32
69 AT1G15660 centromere protein C CENP-C HOMOLOGUE, centromere
protein C
0.67 0.31 -0.29
70 AT2G47380 Cytochrome c oxidase subunit Vc family protein -0.67 0.32 -0.31
71 AT1G23730 beta carbonic anhydrase 3 BETA CARBONIC ANHYDRASE 3, beta
carbonic anhydrase 3
-0.67 0.31 -0.32
72 AT5G42890 sterol carrier protein 2 STEROL CARRIER PROTEIN 2, sterol
carrier protein 2
-0.67 0.27 -0.32
73 AT2G24210 terpene synthase 10 terpene synthase 10 -0.67 0.32 -0.31
74 AT5G57860 Ubiquitin-like superfamily protein -0.67 0.3 -0.34
75 AT3G17940 Galactose mutarotase-like superfamily protein -0.67 0.31 -0.34
76 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB -0.67 0.32 -0.34
77 AT2G16510 ATPase, F0/V0 complex, subunit C protein -0.67 0.3 -0.32
78 AT1G01800 NAD(P)-binding Rossmann-fold superfamily protein -0.67 0.3 -0.33
79 AT3G03100 NADH:ubiquinone oxidoreductase, 17.2kDa subunit -0.67 0.31 -0.32
80 AT4G26310 elongation factor P (EF-P) family protein -0.67 0.32 -0.3
81 AT4G16330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.66 0.31 -0.29
82 AT2G18250 4-phosphopantetheine adenylyltransferase 4-phosphopantetheine
adenylyltransferase,
4-phosphopantetheine
adenylyltransferase
-0.66 0.34 -0.32
83 AT1G08840 DNA replication helicase, putative embryo defective 2411 0.66 0.32 -0.33
84 AT5G23810 amino acid permease 7 amino acid permease 7 -0.66 0.31 -0.3
85 AT1G74340 dolichol phosphate-mannose biosynthesis regulatory
protein-related
dolichol phosphate mannose
synthase 2
-0.66 0.3 -0.29
86 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
-0.66 0.32 -0.31
87 AT2G32170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.66 0.32 -0.31
88 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase -0.66 0.3 -0.33
89 AT2G01850 endoxyloglucan transferase A3 ATXTH27, endoxyloglucan
transferase A3, XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 27
-0.66 0.33 -0.3
90 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3
-0.66 0.31 -0.32
91 AT1G69680 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein
-0.66 0.32 -0.31
92 AT5G65940 beta-hydroxyisobutyryl-CoA hydrolase 1 beta-hydroxyisobutyryl-CoA
hydrolase 1
-0.66 0.3 -0.33
93 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
-0.66 0.32 -0.27
94 AT2G42490 Copper amine oxidase family protein -0.66 0.31 -0.31
95 AT1G64850 Calcium-binding EF hand family protein -0.66 0.33 -0.31
96 AT3G62450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).
-0.66 0.3 -0.33
97 AT1G80370 Cyclin A2;4 Cyclin A2;4 0.65 0.31 -0.31
98 AT5G07130 laccase 13 laccase 13 0.65 0.3 -0.34
99 AT5G66850 mitogen-activated protein kinase kinase kinase 5 mitogen-activated protein kinase
kinase kinase 5
0.65 0.29 -0.33
100 AT5G51600 Microtubule associated protein (MAP65/ASE1) family protein ARABIDOPSIS THALIANA
MICROTUBULE-ASSOCIATED PROTEIN
65-3, MICROTUBULE-ASSOCIATED
PROTEIN 65-3, PLEIADE
0.65 0.31 -0.31
101 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein 0.64 0.31 -0.3
102 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.64 0.31 -0.3
103 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).
0.64 0.29 -0.31
104 AT3G20150 Kinesin motor family protein 0.63 0.3 -0.3
105 AT3G07320 O-Glycosyl hydrolases family 17 protein 0.63 0.32 -0.28
106 AT2G29210 splicing factor PWI domain-containing protein 0.63 0.3 -0.32
107 AT2G26760 Cyclin B1;4 Cyclin B1;4 0.63 0.32 -0.32
108 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B
0.62 0.32 -0.33
109 AT1G70550 Protein of Unknown Function (DUF239) 0.62 0.31 -0.31
110 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4
0.62 0.34 -0.32
111 AT1G25320 Leucine-rich repeat protein kinase family protein 0.62 0.32 -0.32
112 AT4G21270 kinesin 1 kinesin 1, KINESIN-LIKE PROTEIN
IN ARABIDOPSIS THALIANA A,
KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA A PROTEIN
0.62 0.32 -0.34
113 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.61 0.32 -0.33
114 AT1G56310 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein
0.61 0.32 -0.3
115 AT5G67100 DNA-directed DNA polymerases INCURVATA2 0.61 0.3 -0.3
116 AT5G65700 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 1 0.61 0.31 -0.3
117 AT1G08130 DNA ligase 1 DNA ligase 1, DNA ligase 1 0.61 0.31 -0.35
118 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 0.61 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0256 Tryptamine - Tryptamine IAA biosynthesis I 0.81 0.46 -0.45 C0256
120 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
0.69 0.45 -0.47 C0010
121 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I
0.64 0.53 -0.44 C0083