AT5G48650 : -
Query Information
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AGICode AT5G48650
Description Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G48650 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 1 0.29 -0.31
2 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 -0.74 0.31 -0.33
3 AT1G34245 Putative membrane lipoprotein EPIDERMAL PATTERNING FACTOR 2 -0.73 0.31 -0.33
4 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 0.73 0.34 -0.3
5 AT2G38370 Plant protein of unknown function (DUF827) 0.72 0.3 -0.32
6 AT3G55920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.72 0.32 -0.3
7 AT1G34110 Leucine-rich receptor-like protein kinase family protein 0.72 0.34 -0.33
8 AT1G24020 MLP-like protein 423 MLP-like protein 423 -0.71 0.34 -0.32
9 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 0.71 0.33 -0.32
10 AT1G33930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.31 -0.32
11 AT3G49260 IQ-domain 21 IQ-domain 21 -0.7 0.31 -0.29
12 AT5G53210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 SPEECHLESS -0.69 0.34 -0.32
13 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 0.69 0.33 -0.3
14 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 0.69 0.31 -0.32
15 AT5G01870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.3 -0.32
16 AT2G43860 Pectin lyase-like superfamily protein 0.68 0.32 -0.31
17 AT3G49560 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.67 0.31 -0.33
18 AT1G09380 nodulin MtN21 /EamA-like transporter family protein 0.67 0.31 -0.31
19 AT2G22680 Zinc finger (C3HC4-type RING finger) family protein WAV3 homolog 1 0.67 0.3 -0.31
20 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION -0.67 0.32 -0.32
21 AT1G51190 Integrase-type DNA-binding superfamily protein PLETHORA 2 0.67 0.34 -0.31
22 AT2G21080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3537 (InterPro:IPR021924);
BEST Arabidopsis thaliana protein match is: Protein of
unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141
Blast hits to 141 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.67 0.3 -0.32
23 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.31
24 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 0.66 0.34 -0.3
25 AT3G02570 Mannose-6-phosphate isomerase, type I MATERNAL EFFECT EMBRYO ARREST 31,
PHOSPHOMANNOSE ISOMERASE 1		 -0.66 0.31 -0.32
26 AT2G22420 Peroxidase superfamily protein 0.65 0.31 -0.31
27 AT1G01030 AP2/B3-like transcriptional factor family protein NGATHA3 -0.65 0.32 -0.32
28 AT1G32070 nuclear shuttle interacting nuclear shuttle interacting,
nuclear shuttle interacting		 -0.65 0.34 -0.33
29 AT4G31805 WRKY family transcription factor -0.65 0.31 -0.31
30 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 0.65 0.31 -0.33
31 AT5G03420 5'-AMP-activated protein kinase-related -0.65 0.34 -0.28
32 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 0.65 0.3 -0.3
33 AT3G20830 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.64 0.33 -0.32
34 AT1G76500 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 29, SUPPRESSOR OF PHYB-4#3		 0.64 0.33 -0.3
35 AT1G03440 Leucine-rich repeat (LRR) family protein -0.64 0.32 -0.32
36 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 0.64 0.31 -0.33
37 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 0.64 0.31 -0.29
38 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 0.64 0.32 -0.31
39 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.64 0.3 -0.34
40 AT2G25790 Leucine-rich receptor-like protein kinase family protein 0.63 0.31 -0.31
41 AT5G02640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits
to 37 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.34
42 AT4G14570 acylaminoacyl-peptidase-related acylamino acid-releasing enzyme,
AtAARE		 -0.63 0.29 -0.32
43 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.33 -0.32
44 AT4G13030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.32 -0.31
45 AT5G67560 ADP-ribosylation factor-like A1D ADP-ribosylation factor-like A1D,
ADP-ribosylation factor-like A1D		 -0.63 0.32 -0.31
46 AT3G14210 epithiospecifier modifier 1 epithiospecifier modifier 1 -0.63 0.31 -0.31
47 AT2G23030 SNF1-related protein kinase 2.9 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-9, SNF1-related
protein kinase 2.9		 0.63 0.34 -0.31
48 AT3G08570 Phototropic-responsive NPH3 family protein 0.63 0.3 -0.3
49 AT1G18980 RmlC-like cupins superfamily protein 0.63 0.31 -0.32
50 AT3G24450 Heavy metal transport/detoxification superfamily protein 0.62 0.32 -0.32
51 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 0.62 0.34 -0.32
52 AT2G26700 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 PINOID2 0.62 0.29 -0.31
53 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 0.62 0.31 -0.3
54 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.31 -0.34
55 AT2G30340 LOB domain-containing protein 13 LOB domain-containing protein 13 0.62 0.32 -0.33
56 AT3G24140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FAMA -0.61 0.32 -0.31
57 AT2G13610 ABC-2 type transporter family protein ATP-binding cassette G5 -0.61 0.34 -0.31
58 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT 0.61 0.3 -0.31
59 AT5G61060 histone deacetylase 5 ATHDA5, histone deacetylase 5,
HDA5		 0.61 0.33 -0.33
60 AT3G18060 transducin family protein / WD-40 repeat family protein -0.61 0.3 -0.31
61 AT5G20140 SOUL heme-binding family protein -0.61 0.32 -0.31
62 AT5G13120 cyclophilin 20-2 ARABIDOPSIS THALIANA CYCLOPHILIN
20-2, cyclophilin 20-2,
Photosynthetic NDH subcomplex L 5		 -0.6 0.33 -0.31
63 AT4G36740 homeobox protein 40 homeobox protein 40, HB-5,
homeobox protein 40		 0.6 0.32 -0.31
64 AT2G03830 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 8 0.6 0.33 -0.33
65 AT4G36710 GRAS family transcription factor Arabidopsis thaliana HAIRY
MERISTEM 4, HAM4		 -0.6 0.3 -0.31
66 AT1G26680 transcriptional factor B3 family protein 0.6 0.33 -0.29
67 AT1G31500 DNAse I-like superfamily protein -0.6 0.3 -0.34
68 AT3G21310 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.6 0.3 -0.29
69 AT2G45420 LOB domain-containing protein 18 LOB domain-containing protein 18 0.59 0.32 -0.32
70 AT1G11420 DOMAIN OF UNKNOWN FUNCTION 724 2 DOMAIN OF UNKNOWN FUNCTION 724 2,
DOMAIN OF UNKNOWN FUNCTION 724 2		 0.59 0.28 -0.3
71 AT1G26160 Metal-dependent phosphohydrolase -0.59 0.31 -0.31
72 AT2G24390 AIG2-like (avirulence induced gene) family protein -0.59 0.32 -0.33
73 AT1G31410 putrescine-binding periplasmic protein-related -0.59 0.31 -0.31
74 AT2G41070 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP12, DPBF4, ENHANCED EM LEVEL 0.59 0.31 -0.34
75 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 0.58 0.31 -0.32
76 AT2G42440 Lateral organ boundaries (LOB) domain family protein 0.58 0.34 -0.31
77 AT5G19370 rhodanese-like domain-containing protein / PPIC-type PPIASE
domain-containing protein		 -0.58 0.31 -0.3
78 AT2G46920 Protein phosphatase 2C family protein poltergeist 0.58 0.3 -0.33
79 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.32 -0.29
80 AT4G18550 alpha/beta-Hydrolases superfamily protein Arabidopsis thaliana DAD1-like
seeding establishment-related
lipase, DAD1-like seeding
establishment-related lipase		 0.58 0.32 -0.29
81 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.3 -0.33
82 AT1G50170 sirohydrochlorin ferrochelatase B sirohydrochlorin ferrochelatase B,
sirohydrochlorin ferrochelatase B		 -0.58 0.31 -0.3
83 AT4G15120 VQ motif-containing protein 0.58 0.31 -0.31
84 AT1G53860 Remorin family protein 0.58 0.32 -0.31
85 AT1G08430 aluminum-activated malate transporter 1 aluminum-activated malate
transporter 1, ARABIDOPSIS
THALIANA ALUMINUM-ACTIVATED MALATE
TRANSPORTER 1		 0.58 0.31 -0.3
86 AT3G53560 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.35 -0.31
87 AT4G20900 Tetratricopeptide repeat (TPR)-like superfamily protein MALE-STERILE 5, TDM1 -0.57 0.32 -0.34
88 AT1G33290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.57 0.32 -0.28
89 AT2G37210 lysine decarboxylase family protein LONELY GUY 3 0.57 0.31 -0.32
90 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 0.57 0.31 -0.31
91 AT5G38660 acclimation of photosynthesis to environment ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT		 -0.57 0.33 -0.32
92 AT1G78010 tRNA modification GTPase, putative -0.57 0.34 -0.31
93 AT2G44090 Ankyrin repeat family protein -0.57 0.32 -0.31
94 AT2G01430 homeobox-leucine zipper protein 17 ARABIDOPSIS THALIANA
HOMEOBOX-LEUCINE ZIPPER PROTEIN
17, homeobox-leucine zipper
protein 17, homeobox-leucine
zipper protein 17		 0.57 0.3 -0.31
95 AT5G05050 Cysteine proteinases superfamily protein -0.57 0.31 -0.3
96 AT1G33330 Class I peptide chain release factor -0.56 0.33 -0.33
97 AT5G17430 Integrase-type DNA-binding superfamily protein BABY BOOM 0.56 0.31 -0.3
98 AT5G50860 Protein kinase superfamily protein -0.56 0.31 -0.34
99 AT1G06820 carotenoid isomerase CAROTENOID AND CHLOROPLAST
REGULATION 2, carotenoid isomerase		 -0.56 0.33 -0.31
100 AT2G25520 Drug/metabolite transporter superfamily protein 0.56 0.32 -0.33
101 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase -0.56 0.3 -0.33
102 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 -0.55 0.29 -0.32
103 AT4G12700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits
to 136 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.55 0.32 -0.31
104 AT2G28790 Pathogenesis-related thaumatin superfamily protein 0.55 0.32 -0.33
105 AT5G05160 Leucine-rich repeat protein kinase family protein REDUCED IN LATERAL GROWTH1 0.55 0.32 -0.3
106 AT5G06080 LOB domain-containing protein 33 LOB domain-containing protein 33 0.55 0.32 -0.32
107 AT3G29180 Protein of unknown function (DUF1336) 0.55 0.3 -0.31
108 AT1G23380 KNOTTED1-like homeobox gene 6 KNOTTED1-like homeobox gene 6,
KNAT6L, KNAT6S		 0.55 0.3 -0.32
109 AT1G13980 sec7 domain-containing protein EMBRYO DEFECTIVE 30, GNOM,
VASCULAR NETWORK 7		 0.55 0.31 -0.31
110 AT5G06130 chaperone protein dnaJ-related -0.55 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.78 0.42 -0.45 C0001
112 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.77 0.45 -0.47 C0012
113 C0074 Cystine L-Cystine L-Cystine protein precursor 0.75 0.42 -0.46 C0074
114 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.73 0.44 -0.44 C0144
115 C0086 Disinapylspermidine - - - 0.69 0.44 -0.47
116 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis 0.61 0.46 -0.46 C0240