AT5G48900 : -
Query Information
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AGICode AT5G48900
Description Pectin lyase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G48900 Pectin lyase-like superfamily protein 1 0.29 -0.32
2 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 0.86 0.28 -0.35
3 AT3G03840 SAUR-like auxin-responsive protein family 0.85 0.28 -0.32
4 AT5G18060 SAUR-like auxin-responsive protein family 0.84 0.3 -0.32
5 AT5G25460 Protein of unknown function, DUF642 0.83 0.34 -0.3
6 AT1G20190 expansin 11 ATEXP11, expansin 11, ATHEXP ALPHA
1.14, EXPANSIN 11, expansin 11		 0.83 0.31 -0.31
7 AT3G16370 GDSL-like Lipase/Acylhydrolase superfamily protein 0.82 0.33 -0.32
8 AT3G62630 Protein of unknown function (DUF1645) 0.82 0.32 -0.31
9 AT5G07590 Transducin/WD40 repeat-like superfamily protein 0.82 0.32 -0.31
10 AT5G58350 with no lysine (K) kinase 4 with no lysine (K) kinase 4, ZIK2 -0.82 0.32 -0.31
11 AT5G43100 Eukaryotic aspartyl protease family protein -0.81 0.31 -0.3
12 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.81 0.32 -0.32
13 AT1G29500 SAUR-like auxin-responsive protein family 0.81 0.3 -0.3
14 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 -0.81 0.32 -0.32
15 AT5G04540 Myotubularin-like phosphatases II superfamily -0.81 0.31 -0.31
16 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 -0.8 0.33 -0.31
17 AT3G12710 DNA glycosylase superfamily protein 0.8 0.3 -0.3
18 AT1G17020 senescence-related gene 1 SENESCENCE-RELATED GENE 1,
senescence-related gene 1		 -0.8 0.33 -0.33
19 AT1G29510 SAUR-like auxin-responsive protein family SMALL AUXIN UPREGULATED 68 0.8 0.32 -0.32
20 AT3G12610 Leucine-rich repeat (LRR) family protein DNA-DAMAGE REPAIR/TOLERATION 100 0.8 0.31 -0.34
21 AT1G13250 galacturonosyltransferase-like 3 galacturonosyltransferase-like 3 0.8 0.33 -0.32
22 AT5G02890 HXXXD-type acyl-transferase family protein 0.79 0.3 -0.33
23 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein -0.79 0.31 -0.32
24 AT4G29360 O-Glycosyl hydrolases family 17 protein 0.79 0.33 -0.3
25 AT1G69930 glutathione S-transferase TAU 11 glutathione S-transferase TAU 11,
glutathione S-transferase TAU 11		 -0.79 0.34 -0.31
26 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.78 0.32 -0.32
27 AT1G71140 MATE efflux family protein -0.78 0.32 -0.3
28 AT3G08030 Protein of unknown function, DUF642 0.78 0.32 -0.32
29 AT1G29440 SAUR-like auxin-responsive protein family 0.78 0.32 -0.31
30 AT5G46180 ornithine-delta-aminotransferase ornithine-delta-aminotransferase -0.78 0.3 -0.33
31 AT1G04820 tubulin alpha-4 chain TORTIFOLIA 2, tubulin alpha-4
chain		 0.78 0.3 -0.31
32 AT5G51560 Leucine-rich repeat protein kinase family protein 0.77 0.31 -0.3
33 AT3G07010 Pectin lyase-like superfamily protein 0.77 0.31 -0.3
34 AT3G15500 NAC domain containing protein 3 NAC domain containing protein 55,
NAC domain containing protein 3,
NAC domain containing protein 55,
NAC domain containing protein 3		 -0.77 0.31 -0.31
35 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 0.77 0.31 -0.33
36 AT2G32660 receptor like protein 22 receptor like protein 22, receptor
like protein 22		 -0.77 0.32 -0.3
37 AT5G22940 FRA8 homolog FRA8 homolog 0.77 0.33 -0.31
38 AT2G37150 RING/U-box superfamily protein -0.77 0.3 -0.33
39 AT2G01420 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 4,
PIN-FORMED 4		 0.77 0.31 -0.31
40 AT4G25230 RPM1 interacting protein 2 RPM1 interacting protein 2 -0.77 0.31 -0.31
41 AT1G23080 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 7,
PIN-FORMED 7		 0.77 0.32 -0.29
42 AT1G70830 MLP-like protein 28 MLP-like protein 28 0.77 0.3 -0.31
43 AT1G29460 SAUR-like auxin-responsive protein family 0.77 0.32 -0.32
44 AT1G75680 glycosyl hydrolase 9B7 glycosyl hydrolase 9B7, glycosyl
hydrolase 9B7		 0.76 0.33 -0.31
45 AT3G59700 lectin-receptor kinase lectin-receptor kinase,
lectin-receptor kinase,
LECTIN-RECEPTOR KINASE 1		 -0.76 0.33 -0.33
46 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain 0.76 0.3 -0.33
47 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 -0.76 0.32 -0.3
48 AT4G34760 SAUR-like auxin-responsive protein family 0.76 0.32 -0.32
49 AT3G26690 nudix hydrolase homolog 13 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 13, nudix
hydrolase homolog 13, nudix
hydrolase homolog 13		 -0.75 0.31 -0.32
50 AT5G58960 Plant protein of unknown function (DUF641) GRAVITROPIC IN THE LIGHT 0.75 0.32 -0.3
51 AT1G08315 ARM repeat superfamily protein -0.75 0.31 -0.3
52 AT4G29490 Metallopeptidase M24 family protein -0.75 0.3 -0.31
53 AT4G30020 PA-domain containing subtilase family protein 0.74 0.32 -0.35
54 AT5G12250 beta-6 tubulin beta-6 tubulin 0.74 0.3 -0.32
55 AT3G57040 response regulator 9 response regulator 9, RESPONSE
REGULATOR 4		 0.74 0.33 -0.32
56 AT2G43510 trypsin inhibitor protein 1 trypsin inhibitor protein 1,
trypsin inhibitor protein 1		 -0.74 0.33 -0.32
57 AT4G38850 SAUR-like auxin-responsive protein family ARABIDOPSIS THALIANA SMALL AUXIN
UPREGULATED 15, ARABIDOPSIS
COLUMBIA SAUR GENE 1, SMALL AUXIN
UPREGULATED 15, SMALL AUXIN UP RNA
1 FROM ARABIDOPSIS THALIANA
ECOTYPE COLUMBIA		 0.74 0.32 -0.32
58 AT1G64390 glycosyl hydrolase 9C2 glycosyl hydrolase 9C2, glycosyl
hydrolase 9C2		 0.74 0.33 -0.32
59 AT5G45670 GDSL-like Lipase/Acylhydrolase superfamily protein 0.74 0.34 -0.32
60 AT2G37640 Barwin-like endoglucanases superfamily protein EXPANSIN 3, ARABIDOPSIS THALIANA
EXPANSIN A3, ATHEXP ALPHA 1.9,
EXP3		 0.74 0.29 -0.33
61 AT3G55005 tonneau 1b (TON1b) tonneau 1b 0.73 0.32 -0.31
62 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.73 0.31 -0.34
63 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 -0.73 0.31 -0.32
64 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 0.73 0.3 -0.33
65 AT2G41480 Peroxidase superfamily protein -0.73 0.33 -0.33
66 AT2G41820 Leucine-rich repeat protein kinase family protein 0.73 0.35 -0.33
67 AT2G25950 Protein of unknown function (DUF1000) -0.73 0.33 -0.36
68 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 -0.73 0.32 -0.3
69 AT3G06150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19060.1); Has 61 Blast hits
to 59 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.31
70 AT1G62640 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein
synthase III		 0.72 0.33 -0.32
71 AT5G64770 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 9 0.72 0.31 -0.32
72 AT3G28860 ATP binding cassette subfamily B19 ATP-binding cassette B19,
Arabidopsis thaliana ATP-binding
cassette B19, ATMDR1, MULTIDRUG
RESISTANCE PROTEIN 11, ATPGP19,
MDR1, MDR11, P-GLYCOPROTEIN 19		 0.72 0.32 -0.32
73 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 -0.72 0.32 -0.31
74 AT5G52810 NAD(P)-binding Rossmann-fold superfamily protein -0.72 0.29 -0.3
75 AT5G66460 Glycosyl hydrolase superfamily protein AtMAN7, endo-beta-mannase 7 0.72 0.31 -0.3
76 AT5G65280 GCR2-like 1 GCR2-like 1 -0.72 0.35 -0.31
77 AT1G80160 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 7 -0.72 0.32 -0.3
78 AT4G29020 glycine-rich protein 0.72 0.32 -0.33
79 AT5G13460 IQ-domain 11 IQ-domain 11 0.71 0.32 -0.32
80 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.32 -0.32
81 AT1G35350 EXS (ERD1/XPR1/SYG1) family protein -0.71 0.31 -0.32
82 AT1G18620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74160.1); Has 1987 Blast hits
to 1263 proteins in 207 species: Archae - 0; Bacteria -
172; Metazoa - 665; Fungi - 149; Plants - 271; Viruses - 6;
Other Eukaryotes - 724 (source: NCBI BLink).		 0.71 0.31 -0.32
83 AT5G04020 calmodulin binding -0.71 0.33 -0.33
84 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 -0.71 0.31 -0.29
85 AT4G29210 gamma-glutamyl transpeptidase 4 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 -0.71 0.31 -0.32
86 AT3G53380 Concanavalin A-like lectin protein kinase family protein 0.71 0.33 -0.33
87 AT3G50770 calmodulin-like 41 calmodulin-like 41 -0.7 0.31 -0.3
88 AT4G30460 glycine-rich protein -0.7 0.32 -0.3
89 AT5G44290 Protein kinase superfamily protein -0.7 0.32 -0.3
90 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 -0.7 0.31 -0.31
91 AT4G04960 Concanavalin A-like lectin protein kinase family protein -0.7 0.32 -0.31
92 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 -0.7 0.31 -0.31
93 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.7 0.33 -0.32
94 AT5G53360 TRAF-like superfamily protein -0.7 0.29 -0.31
95 AT4G24000 cellulose synthase like G2 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G2, cellulose
synthase like G2		 -0.7 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.78 0.46 -0.48 C0252
97 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.76 0.46 -0.46 C0007