AT5G48140 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G48140
Description Pectin lyase-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G48140 Pectin lyase-like superfamily protein 1 0.31 -0.32
2 AT3G52760 Integral membrane Yip1 family protein 0.78 0.31 -0.31
3 AT3G13170 Spo11/DNA topoisomerase VI, subunit A protein ATSPO11-1 -0.76 0.3 -0.31
4 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 0.73 0.31 -0.32
5 AT4G25770 alpha/beta-Hydrolases superfamily protein 0.72 0.32 -0.34
6 AT1G58300 heme oxygenase 4 heme oxygenase 4 -0.72 0.31 -0.32
7 AT2G35890 calcium-dependent protein kinase 25 calcium-dependent protein kinase
25		 0.72 0.31 -0.3
8 AT3G18450 PLAC8 family protein 0.72 0.33 -0.32
9 AT2G36710 Pectin lyase-like superfamily protein 0.7 0.32 -0.31
10 AT3G10890 Glycosyl hydrolase superfamily protein 0.7 0.31 -0.31
11 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 -0.7 0.31 -0.32
12 AT3G42430 transposable element gene 0.7 0.33 -0.32
13 AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.69 0.31 -0.32
14 AT5G39820 NAC domain containing protein 94 NAC domain containing protein 94,
NAC domain containing protein 94		 -0.69 0.33 -0.32
15 AT2G38590 F-box and associated interaction domains-containing protein -0.69 0.31 -0.32
16 AT1G77405 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.3 -0.31
17 AT3G02270 Trimeric LpxA-like enzyme 0.68 0.31 -0.33
18 AT1G30350 Pectin lyase-like superfamily protein -0.68 0.32 -0.32
19 AT2G21910 cytochrome P450, family 96, subfamily A, polypeptide 5 cytochrome P450, family 96,
subfamily A, polypeptide 5		 0.68 0.33 -0.32
20 AT5G49750 Leucine-rich repeat (LRR) family protein 0.68 0.34 -0.32
21 AT3G19880 F-box and associated interaction domains-containing protein -0.67 0.31 -0.32
22 AT3G24315 Sec20 family protein AtSec20 0.67 0.32 -0.31
23 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.3 -0.31
24 AT3G43880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G07526.3); Has 32 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.34
25 AT3G21100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.3 -0.34
26 AT5G45000 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.32 -0.32
27 AT5G46310 WRKY family transcription factor -0.67 0.33 -0.32
28 AT1G79880 RNA recognition motif (RRM)-containing protein -0.67 0.31 -0.31
29 AT1G20280 homeobox-leucine zipper protein-related -0.67 0.32 -0.34
30 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.67 0.32 -0.32
31 AT3G43760 transposable element gene -0.67 0.31 -0.32
32 AT2G37670 Transducin/WD40 repeat-like superfamily protein -0.67 0.3 -0.32
33 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.66 0.32 -0.33
34 AT5G22550 Plant protein of unknown function (DUF247) -0.66 0.33 -0.31
35 AT2G29750 UDP-glucosyl transferase 71C1 UDP-glucosyl transferase 71C1 -0.66 0.31 -0.32
36 AT4G04120 transposable element gene 0.66 0.28 -0.3
37 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein 0.66 0.31 -0.31
38 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.66 0.31 -0.31
39 AT2G11590 transposable element gene -0.66 0.33 -0.31
40 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.66 0.32 -0.3
41 AT2G28690 Protein of unknown function (DUF1635) -0.66 0.3 -0.32
42 AT1G59630 F-box associated ubiquitination effector family protein 0.66 0.32 -0.33
43 AT1G14200 RING/U-box superfamily protein 0.66 0.32 -0.3
44 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.66 0.32 -0.3
45 AT4G10370 Cysteine/Histidine-rich C1 domain family protein 0.66 0.31 -0.31
46 AT3G18900 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: synergid; CONTAINS InterPro
DOMAIN/s: F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451), Protein of unknown function DUF547
(InterPro:IPR006869); BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT5G66600.3).		 -0.66 0.31 -0.32
47 AT5G34900 transposable element gene -0.66 0.31 -0.32
48 AT5G40560 DegP protease 13 DegP protease 13 0.65 0.31 -0.31
49 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) 0.65 0.32 -0.32
50 AT4G28770 Tetraspanin family protein 0.65 0.34 -0.31
51 AT3G27150 Galactose oxidase/kelch repeat superfamily protein -0.65 0.31 -0.31
52 AT3G54270 sucrose-6F-phosphate phosphohydrolase family protein -0.65 0.33 -0.3
53 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.31 -0.31
54 AT4G05060 PapD-like superfamily protein 0.65 0.33 -0.29
55 AT5G45240 Disease resistance protein (TIR-NBS-LRR class) 0.65 0.31 -0.32
56 AT1G43260 hAT transposon superfamily protein -0.65 0.33 -0.33
57 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 -0.65 0.32 -0.31
58 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.65 0.31 -0.32
59 AT3G11640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G52480.1); Has 36 Blast
hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.31
60 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.65 0.31 -0.32
61 AT1G74490 Protein kinase superfamily protein -0.64 0.31 -0.32
62 AT4G17690 Peroxidase superfamily protein 0.64 0.32 -0.32
63 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.64 0.31 -0.31
64 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 -0.64 0.32 -0.3
65 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 0.64 0.32 -0.31
66 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.32 -0.3
67 AT5G15070 Phosphoglycerate mutase-like family protein -0.64 0.31 -0.32
68 AT5G37620 Cysteine/Histidine-rich C1 domain family protein -0.64 0.32 -0.33
69 AT1G27820 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.64 0.3 -0.32
70 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.33 -0.31
71 AT1G64480 calcineurin B-like protein 8 calcineurin B-like protein 8 -0.64 0.32 -0.32
72 AT2G34330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29540.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.32
73 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein -0.63 0.32 -0.32
74 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.32 -0.34
75 AT5G46500 BEST Arabidopsis thaliana protein match is: disease
resistance protein (TIR-NBS-LRR class) family
(TAIR:AT5G46260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.31 -0.33
76 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.28 -0.31
77 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 -0.63 0.31 -0.34
78 AT5G02390 Protein of unknown function (DUF3741) DUO1-activated unknown 1 0.63 0.3 -0.32
79 AT3G32060 transposable element gene 0.63 0.31 -0.31
80 AT5G47280 ADR1-like 3 ADR1-like 3 -0.63 0.31 -0.29
81 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.31 -0.31
82 AT1G20150 Subtilisin-like serine endopeptidase family protein -0.63 0.29 -0.32
83 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 -0.63 0.31 -0.3
84 AT2G25820 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 2 0.63 0.32 -0.33
85 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.31 -0.32
86 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.34 -0.31
87 AT3G29690 HXXXD-type acyl-transferase family protein 0.62 0.31 -0.31
88 AT3G44000 transposable element gene 0.62 0.33 -0.31
89 AT5G52690 Copper transport protein family 0.62 0.31 -0.32
90 AT5G03250 Phototropic-responsive NPH3 family protein -0.62 0.31 -0.31
91 AT4G13380 Heavy metal transport/detoxification superfamily protein maternal effect embryo arrest 56 0.62 0.33 -0.31
92 AT1G49100 Leucine-rich repeat protein kinase family protein 0.62 0.31 -0.32
93 AT5G11570 Major facilitator superfamily protein -0.62 0.31 -0.31
94 AT5G07710 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.62 0.33 -0.32
95 AT1G43886 transposable element gene 0.62 0.3 -0.33
96 AT5G55650 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.3 -0.31
97 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 -0.62 0.31 -0.31
98 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.62 0.31 -0.31
99 AT2G15130 Plant basic secretory protein (BSP) family protein -0.62 0.31 -0.3
100 AT4G30230 unknown protein; Has 42 Blast hits to 42 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.31 -0.32
101 AT2G28990 Leucine-rich repeat protein kinase family protein 0.62 0.3 -0.31
102 AT3G43630 Vacuolar iron transporter (VIT) family protein -0.62 0.33 -0.34
103 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 -0.61 0.32 -0.31
104 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 -0.61 0.33 -0.31
105 AT2G06310 transposable element gene 0.61 0.33 -0.32
106 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.61 0.3 -0.31
107 AT3G52310 ABC-2 type transporter family protein ATP-binding cassette G27 -0.61 0.32 -0.34
108 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 0.61 0.33 -0.34
109 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.32 -0.32
110 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.61 0.32 -0.34
111 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein 0.61 0.31 -0.33
112 AT3G50230 Leucine-rich repeat protein kinase family protein -0.61 0.3 -0.3
113 AT2G28680 RmlC-like cupins superfamily protein -0.61 0.3 -0.32
114 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.3 -0.33
115 AT3G60120 beta glucosidase 27 beta glucosidase 27 0.61 0.33 -0.32
116 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 0.61 0.31 -0.3
117 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.31 -0.32
118 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.6 0.31 -0.29
119 AT3G55700 UDP-Glycosyltransferase superfamily protein 0.6 0.33 -0.31
120 AT2G10950 BSD domain-containing protein 0.6 0.33 -0.3
121 AT2G35590 pseudogene, serpin (serine protease inhibitor), putative,
similar to protein zx (Hordeum vulgare subsp. vulgare)
GI:19071, serpin (Triticum aestivum) GI:1885346; contains
Pfam profile PF00079: Serpin (serine protease inhibitor);
this is very likely a pseudogene.; blastp match of 52%
identity and 2.2e-73 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.6 0.33 -0.31
122 AT3G42730 transposable element gene 0.6 0.32 -0.32
123 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein -0.6 0.31 -0.34
124 AT3G20190 Leucine-rich repeat protein kinase family protein 0.6 0.32 -0.31
125 AT1G62070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 8 Blast hits to 8 proteins in 4
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.34 -0.34
126 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 -0.6 0.31 -0.33
127 AT2G19410 U-box domain-containing protein kinase family protein 0.6 0.31 -0.32
128 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.33 -0.32
129 AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly
factor-related		 -0.6 0.32 -0.31
130 AT4G28395 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 ANTHER 7, ARABIDOPSIS THALIANA
ANTHER 7		 -0.6 0.32 -0.33
131 AT1G22420 hydroxyproline-rich glycoprotein family protein -0.6 0.31 -0.31