AT5G47680 : AtTRM
Query Information
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AGICode AT5G47680
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 1 0.32 -0.31
2 AT1G25260 Ribosomal protein L10 family protein 0.8 0.32 -0.31
3 AT2G36930 zinc finger (C2H2 type) family protein 0.77 0.32 -0.33
4 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.74 0.34 -0.33
5 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.73 0.31 -0.31
6 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.73 0.32 -0.31
7 AT5G12410 THUMP domain-containing protein 0.72 0.31 -0.32
8 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.31 -0.29
9 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein 0.72 0.32 -0.33
10 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.71 0.31 -0.32
11 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 0.71 0.3 -0.32
12 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.7 0.33 -0.33
13 AT2G34900 Transcription factor GTE6 GTE01, GLOBAL TRANSCRIPTION FACTOR
GROUP E1, IMBIBITION-INDUCIBLE 1		 0.69 0.32 -0.33
14 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.69 0.34 -0.29
15 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.33 -0.33
16 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 0.69 0.32 -0.29
17 AT1G07830 ribosomal protein L29 family protein 0.68 0.33 -0.3
18 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.68 0.3 -0.33
19 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 0.67 0.33 -0.32
20 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.66 0.33 -0.3
21 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.66 0.31 -0.32
22 AT2G20060 Ribosomal protein L4/L1 family 0.66 0.31 -0.34
23 AT1G66980 suppressor of npr1-1 constitutive 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 2,
suppressor of npr1-1 constitutive
4		 -0.66 0.32 -0.33
24 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 0.66 0.33 -0.33
25 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.65 0.33 -0.3
26 AT3G58350 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 -0.65 0.29 -0.31
27 AT1G79540 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.32 -0.32
28 AT2G28450 zinc finger (CCCH-type) family protein 0.65 0.3 -0.34
29 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 0.65 0.32 -0.32
30 AT1G63710 cytochrome P450, family 86, subfamily A, polypeptide 7 cytochrome P450, family 86,
subfamily A, polypeptide 7		 -0.65 0.31 -0.32
31 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.65 0.34 -0.31
32 AT4G17695 Homeodomain-like superfamily protein KANADI 3 -0.65 0.32 -0.32
33 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 -0.65 0.29 -0.31
34 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 0.64 0.29 -0.3
35 AT1G13590 phytosulfokine 1 precursor phytosulfokine 1 precursor,
phytosulfokine 1 precursor		 0.64 0.31 -0.3
36 AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.64 0.28 -0.3
37 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.64 0.31 -0.31
38 AT5G16990 Zinc-binding dehydrogenase family protein -0.64 0.3 -0.32
39 AT1G10650 SBP (S-ribonuclease binding protein) family protein -0.63 0.34 -0.34
40 AT5G53430 SET domain group 29 ATX5, SET domain group 29, SET29 -0.63 0.32 -0.34
41 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.31
42 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.32 -0.32
43 AT1G61040 plus-3 domain-containing protein vernalization independence 5 0.62 0.32 -0.29
44 AT3G29320 Glycosyl transferase, family 35 alpha-glucan phosphorylase 1 -0.62 0.32 -0.31
45 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.62 0.31 -0.29
46 AT1G19600 pfkB-like carbohydrate kinase family protein 0.62 0.33 -0.32
47 AT2G41500 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related		 EMB2776, LACHESIS 0.62 0.32 -0.3
48 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 -0.62 0.32 -0.31
49 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 -0.61 0.3 -0.31
50 AT4G15520 tRNA/rRNA methyltransferase (SpoU) family protein 0.61 0.32 -0.31
51 AT1G11700 Protein of unknown function, DUF584 -0.61 0.32 -0.3
52 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 -0.61 0.31 -0.31
53 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 0.61 0.31 -0.31
54 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.3 -0.33
55 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.6 0.32 -0.3
56 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 -0.6 0.34 -0.32
57 AT2G19780 Leucine-rich repeat (LRR) family protein -0.6 0.3 -0.31
58 AT5G41900 alpha/beta-Hydrolases superfamily protein -0.59 0.32 -0.3
59 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 -0.59 0.31 -0.32
60 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.58 0.3 -0.34
61 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 -0.57 0.31 -0.32
62 AT3G61120 AGAMOUS-like 13 AGAMOUS-like 13 -0.57 0.31 -0.29
63 AT4G18570 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.33 -0.31
64 AT3G56260 unknown protein; Has 20 Blast hits to 19 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2;
Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.56 0.32 -0.33
65 AT4G34510 3-ketoacyl-CoA synthase 17 3-ketoacyl-CoA synthase 17 -0.56 0.31 -0.33
66 AT4G16870 transposable element gene -0.55 0.3 -0.32
67 AT4G23720 Protein of unknown function (DUF1191) -0.55 0.32 -0.32
68 AT5G54610 ankyrin ankyrin -0.55 0.31 -0.31
69 AT4G03070 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP, AOP1, AOP1.1 -0.55 0.33 -0.33
70 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 -0.55 0.3 -0.31
71 AT3G11740 Protein of unknown function (DUF567) -0.55 0.3 -0.32