AT5G47620 : -
Query Information
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AGICode AT5G47620
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.32
2 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.72 0.31 -0.32
3 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.71 0.32 -0.32
4 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 -0.71 0.33 -0.33
5 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.71 0.3 -0.31
6 AT5G23750 Remorin family protein -0.7 0.29 -0.34
7 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 0.7 0.35 -0.31
8 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.7 0.31 -0.32
9 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.7 0.33 -0.33
10 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.69 0.32 -0.3
11 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.69 0.31 -0.29
12 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.69 0.31 -0.33
13 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.68 0.31 -0.29
14 AT3G62020 germin-like protein 10 germin-like protein 10 -0.68 0.29 -0.32
15 AT5G65550 UDP-Glycosyltransferase superfamily protein 0.68 0.33 -0.31
16 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.67 0.33 -0.34
17 AT4G16570 protein arginine methyltransferase 7 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 7,
protein arginine methyltransferase
7		 0.67 0.31 -0.3
18 AT4G26000 RNA-binding KH domain-containing protein PEPPER 0.66 0.3 -0.32
19 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.66 0.32 -0.3
20 AT5G17140 Cysteine proteinases superfamily protein 0.66 0.32 -0.29
21 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.66 0.33 -0.3
22 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.33 -0.31
23 AT5G13280 aspartate kinase 1 ASPARTATE KINASE, aspartate kinase
1, ASPARTATE KINASE 1		 0.65 0.31 -0.3
24 AT3G62160 HXXXD-type acyl-transferase family protein -0.65 0.29 -0.32
25 AT2G29800 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.3
26 AT4G33810 Glycosyl hydrolase superfamily protein -0.64 0.32 -0.33
27 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.64 0.32 -0.31
28 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.64 0.32 -0.32
29 AT5G45180 Flavin-binding monooxygenase family protein 0.64 0.32 -0.31
30 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.64 0.3 -0.31
31 AT2G28680 RmlC-like cupins superfamily protein 0.64 0.32 -0.33
32 AT4G35500 Protein kinase superfamily protein 0.64 0.31 -0.33
33 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.64 0.3 -0.3
34 AT5G53680 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.33 -0.31
35 AT1G05550 Protein of unknown function (DUF295) 0.63 0.32 -0.33
36 AT2G04850 Auxin-responsive family protein -0.63 0.32 -0.3
37 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 0.63 0.3 -0.32
38 AT3G28610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.3 -0.3
39 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 0.63 0.3 -0.31
40 AT5G60720 Protein of unknown function, DUF547 -0.63 0.3 -0.32
41 AT1G24030 Protein kinase superfamily protein -0.63 0.32 -0.31
42 AT2G18820 transposable element gene 0.62 0.31 -0.3
43 AT5G05480 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 0.62 0.31 -0.29
44 AT1G35780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits
to 144 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.31
45 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 -0.62 0.32 -0.31
46 AT1G17790 DNA-binding bromodomain-containing protein -0.62 0.33 -0.34
47 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.61 0.32 -0.32
48 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) -0.61 0.33 -0.31
49 AT3G56740 Ubiquitin-associated (UBA) protein -0.61 0.33 -0.3
50 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.61 0.34 -0.28
51 AT5G38850 Disease resistance protein (TIR-NBS-LRR class) 0.61 0.31 -0.31
52 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.61 0.31 -0.31
53 AT4G27400 Late embryogenesis abundant (LEA) protein-related 0.61 0.32 -0.29
54 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 -0.61 0.31 -0.31
55 AT4G18780 cellulose synthase family protein CELLULOSE SYNTHASE 8, CELLULOSE
SYNTHASE 8, IRREGULAR XYLEM 1,
LEAF WILTING 2		 -0.61 0.31 -0.33
56 AT2G18960 H(+)-ATPase 1 H(+)-ATPase 1, H(+)-ATPase 1, OPEN
STOMATA 2, PLASMA MEMBRANE PROTON
ATPASE		 0.61 0.31 -0.31
57 AT3G21720 isocitrate lyase isocitrate lyase 0.61 0.32 -0.31
58 AT1G49490 Leucine-rich repeat (LRR) family protein 0.6 0.32 -0.3
59 AT1G49250 ATP-dependent DNA ligase 0.6 0.3 -0.31
60 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.6 0.32 -0.33
61 AT5G10290 leucine-rich repeat transmembrane protein kinase family
protein		 0.6 0.33 -0.32
62 AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.6 0.32 -0.32
63 AT1G15350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits
to 148 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.6 0.31 -0.32
64 AT4G17000 unknown protein; Has 2862 Blast hits to 2331 proteins in
349 species: Archae - 6; Bacteria - 408; Metazoa - 833;
Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes -
1251 (source: NCBI BLink).		 -0.6 0.35 -0.3
65 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 -0.6 0.3 -0.31
66 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 0.6 0.31 -0.28
67 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.6 0.3 -0.32
68 AT1G14510 alfin-like 7 alfin-like 7 0.6 0.34 -0.31
69 AT2G35540 DNAJ heat shock N-terminal domain-containing protein 0.6 0.3 -0.33
70 AT3G16920 chitinase-like protein 2 ATCTL2, chitinase-like protein 2 -0.59 0.33 -0.3
71 AT1G69820 gamma-glutamyl transpeptidase 3 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.59 0.31 -0.31
72 AT4G20840 FAD-binding Berberine family protein 0.59 0.3 -0.3
73 AT1G68320 myb domain protein 62 myb domain protein 62, BW62B,
BW62C, myb domain protein 62		 0.59 0.31 -0.32
74 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.32 -0.3
75 AT4G13960 F-box/RNI-like superfamily protein -0.58 0.31 -0.33
76 AT5G64050 glutamate tRNA synthetase ATERS, glutamate tRNA synthetase,
OVULE ABORTION 3		 0.58 0.32 -0.31
77 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.58 0.31 -0.33
78 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.31 -0.3
79 AT3G19370 Plant protein of unknown function (DUF869) -0.58 0.31 -0.32
80 AT2G37090 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 -0.58 0.31 -0.34
81 AT5G39850 Ribosomal protein S4 0.58 0.32 -0.32
82 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.58 0.3 -0.33
83 AT1G16330 cyclin b3;1 cyclin b3;1 -0.58 0.3 -0.34
84 AT2G15380 transposable element gene 0.57 0.34 -0.32
85 AT5G10770 Eukaryotic aspartyl protease family protein -0.57 0.3 -0.32
86 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 0.57 0.3 -0.3
87 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor -0.57 0.31 -0.32
88 AT1G64290 F-box protein-related -0.57 0.3 -0.34
89 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.3 -0.32
90 AT1G72150 PATELLIN 1 PATELLIN 1 -0.57 0.32 -0.32
91 AT5G03260 laccase 11 laccase 11 -0.57 0.3 -0.31
92 AT4G16890 disease resistance protein (TIR-NBS-LRR class), putative BALL, SUPPRESSOR OF NPR1-1,
CONSTITUTIVE 1		 -0.57 0.32 -0.3
93 AT3G30190 transposable element gene 0.57 0.3 -0.32
94 AT4G07960 Cellulose-synthase-like C12 Cellulose-synthase-like C12,
CELLULOSE-SYNTHASE LIKE C12,
Cellulose-synthase-like C12		 0.57 0.3 -0.3
95 AT3G50120 Plant protein of unknown function (DUF247) -0.56 0.33 -0.31
96 AT2G23900 Pectin lyase-like superfamily protein -0.56 0.32 -0.31
97 AT1G78990 HXXXD-type acyl-transferase family protein -0.56 0.29 -0.31
98 AT1G31440 SH3 domain-containing protein -0.56 0.33 -0.32
99 AT2G19330 plant intracellular ras group-related LRR 6 plant intracellular ras
group-related LRR 6		 -0.56 0.3 -0.31
100 AT1G31760 SWIB/MDM2 domain superfamily protein -0.56 0.34 -0.32
101 AT1G09980 Putative serine esterase family protein -0.55 0.32 -0.33
102 AT5G35870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.55 0.31 -0.3
103 AT5G60020 laccase 17 ATLAC17, laccase 17 -0.55 0.32 -0.3
104 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 -0.55 0.32 -0.33
105 AT3G24750 unknown protein; Has 25 Blast hits to 25 proteins in 12
species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.31 -0.3
106 AT3G62740 beta glucosidase 7 beta glucosidase 7 -0.54 0.31 -0.32
107 AT5G09220 amino acid permease 2 amino acid permease 2 -0.54 0.31 -0.29
108 AT5G14960 DP-E2F-like 2 DP-E2F-like 2, E2FD, E2L1 -0.54 0.32 -0.33
109 AT5G48330 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 2 -0.54 0.31 -0.33
110 AT3G49070 Protein of unknown function (DUF677) -0.54 0.33 -0.33
111 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 -0.54 0.31 -0.31
112 AT1G32840 transposable element gene -0.54 0.34 -0.33
113 AT4G07580 transposable element gene -0.54 0.3 -0.33
114 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 -0.54 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.77 0.46 -0.46 C0105
116 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.75 0.47 -0.4 C0107
117 C0145 Maltotetraose - Maltotetraose starch degradation II 0.74 0.45 -0.47 C0145
118 C0124 Isonicotinic acid - - - 0.7 0.46 -0.48
119 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.59 0.32 -0.32 C0098