AT5G47700 : -
Query Information
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AGICode AT5G47700
Description 60S acidic ribosomal protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G47700 60S acidic ribosomal protein family 1 0.32 -0.32
2 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.95 0.32 -0.3
3 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.94 0.32 -0.34
4 AT3G09200 Ribosomal protein L10 family protein 0.93 0.3 -0.29
5 AT4G16720 Ribosomal protein L23/L15e family protein 0.92 0.32 -0.29
6 AT1G04480 Ribosomal protein L14p/L23e family protein 0.92 0.3 -0.32
7 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.92 0.29 -0.33
8 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.92 0.29 -0.3
9 AT1G48830 Ribosomal protein S7e family protein 0.91 0.33 -0.34
10 AT3G56340 Ribosomal protein S26e family protein 0.91 0.33 -0.32
11 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.91 0.32 -0.31
12 AT2G19730 Ribosomal L28e protein family 0.91 0.29 -0.31
13 AT5G61170 Ribosomal protein S19e family protein 0.91 0.31 -0.32
14 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.91 0.33 -0.32
15 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.9 0.35 -0.32
16 AT2G44120 Ribosomal protein L30/L7 family protein 0.9 0.34 -0.31
17 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.9 0.32 -0.33
18 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.9 0.34 -0.29
19 AT1G34030 Ribosomal protein S13/S18 family 0.9 0.32 -0.31
20 AT1G67430 Ribosomal protein L22p/L17e family protein 0.9 0.31 -0.31
21 AT5G57290 60S acidic ribosomal protein family 0.9 0.29 -0.3
22 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.9 0.31 -0.31
23 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.9 0.31 -0.31
24 AT5G27770 Ribosomal L22e protein family 0.9 0.31 -0.32
25 AT3G23390 Zinc-binding ribosomal protein family protein 0.9 0.32 -0.32
26 AT3G07110 Ribosomal protein L13 family protein 0.9 0.3 -0.31
27 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.9 0.31 -0.34
28 AT3G04840 Ribosomal protein S3Ae 0.89 0.31 -0.33
29 AT3G53890 Ribosomal protein S21e 0.89 0.34 -0.3
30 AT4G25890 60S acidic ribosomal protein family 0.89 0.32 -0.34
31 AT4G15000 Ribosomal L27e protein family 0.89 0.31 -0.31
32 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.89 0.32 -0.31
33 AT2G27720 60S acidic ribosomal protein family 0.89 0.31 -0.32
34 AT3G47370 Ribosomal protein S10p/S20e family protein 0.89 0.33 -0.31
35 AT1G26880 Ribosomal protein L34e superfamily protein 0.89 0.34 -0.29
36 AT1G75560 zinc knuckle (CCHC-type) family protein 0.89 0.31 -0.31
37 AT3G02560 Ribosomal protein S7e family protein 0.89 0.31 -0.31
38 AT2G20450 Ribosomal protein L14 0.89 0.3 -0.33
39 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.89 0.31 -0.32
40 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.88 0.29 -0.3
41 AT2G27710 60S acidic ribosomal protein family 0.88 0.32 -0.32
42 AT3G11510 Ribosomal protein S11 family protein 0.88 0.32 -0.3
43 AT1G29250 Alba DNA/RNA-binding protein 0.88 0.33 -0.33
44 AT2G01250 Ribosomal protein L30/L7 family protein 0.88 0.33 -0.31
45 AT2G39390 Ribosomal L29 family protein 0.88 0.3 -0.29
46 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.88 0.34 -0.3
47 AT2G37190 Ribosomal protein L11 family protein 0.88 0.33 -0.33
48 AT3G06680 Ribosomal L29e protein family 0.88 0.34 -0.28
49 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.88 0.3 -0.3
50 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.88 0.31 -0.3
51 AT3G09500 Ribosomal L29 family protein 0.88 0.31 -0.29
52 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.88 0.32 -0.33
53 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.87 0.3 -0.32
54 AT3G05560 Ribosomal L22e protein family 0.87 0.31 -0.32
55 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.87 0.32 -0.31
56 AT5G56710 Ribosomal protein L31e family protein 0.87 0.31 -0.31
57 AT4G14320 Zinc-binding ribosomal protein family protein 0.87 0.32 -0.31
58 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.87 0.32 -0.35
59 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.31 -0.3
60 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.86 0.31 -0.31
61 AT3G06610 DNA-binding enhancer protein-related 0.86 0.33 -0.33
62 AT5G67510 Translation protein SH3-like family protein 0.86 0.33 -0.29
63 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.86 0.3 -0.31
64 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.86 0.29 -0.31
65 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.86 0.31 -0.32
66 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.86 0.31 -0.32
67 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.86 0.32 -0.32
68 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.86 0.34 -0.32
69 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.86 0.29 -0.31
70 AT5G09510 Ribosomal protein S19 family protein 0.85 0.31 -0.32
71 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.85 0.32 -0.31
72 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.85 0.33 -0.34
73 AT2G33370 Ribosomal protein L14p/L23e family protein 0.85 0.3 -0.31
74 AT3G53430 Ribosomal protein L11 family protein 0.85 0.3 -0.31
75 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.85 0.31 -0.32
76 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.85 0.32 -0.32
77 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.85 0.32 -0.29
78 AT1G73230 Nascent polypeptide-associated complex NAC 0.85 0.3 -0.31
79 AT1G14980 chaperonin 10 chaperonin 10 0.85 0.3 -0.33
80 AT3G60770 Ribosomal protein S13/S15 0.85 0.3 -0.31
81 AT3G43810 calmodulin 7 calmodulin 7 0.85 0.33 -0.32
82 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.85 0.33 -0.31
83 AT1G01100 60S acidic ribosomal protein family 0.85 0.31 -0.32
84 AT3G02080 Ribosomal protein S19e family protein 0.85 0.31 -0.32
85 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.85 0.31 -0.31
86 AT4G26230 Ribosomal protein L31e family protein 0.85 0.32 -0.31
87 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.84 0.33 -0.29
88 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.84 0.31 -0.31
89 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.29 -0.32
90 AT5G51960 CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein
(InterPro:IPR008011); Has 45 Blast hits to 45 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.84 0.32 -0.33
91 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.84 0.31 -0.33
92 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.84 0.34 -0.29
93 AT1G07070 Ribosomal protein L35Ae family protein 0.84 0.32 -0.32
94 AT3G28900 Ribosomal protein L34e superfamily protein 0.84 0.31 -0.33
95 AT5G23290 prefoldin 5 prefoldin 5 0.84 0.33 -0.3
96 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.84 0.31 -0.33
97 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.84 0.3 -0.31
98 AT3G16780 Ribosomal protein L19e family protein 0.84 0.31 -0.29
99 AT3G06700 Ribosomal L29e protein family 0.84 0.29 -0.32
100 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.83 0.31 -0.31
101 AT3G11250 Ribosomal protein L10 family protein 0.83 0.33 -0.3
102 AT2G45710 Zinc-binding ribosomal protein family protein 0.83 0.31 -0.32
103 AT2G43460 Ribosomal L38e protein family 0.83 0.32 -0.32
104 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.83 0.31 -0.33
105 AT5G20920 eukaryotic translation initiation factor 2 beta subunit eukaryotic translation initiation
factor 2 beta subunit, embryo
defective 1401		 0.83 0.33 -0.31
106 AT3G10610 Ribosomal S17 family protein 0.83 0.31 -0.33
107 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.83 0.32 -0.33
108 AT3G44590 60S acidic ribosomal protein family 0.83 0.3 -0.32
109 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.83 0.32 -0.29
110 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.31 -0.3
111 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.83 0.33 -0.31
112 AT3G20250 pumilio 5 pumilio 5, pumilio 5 -0.81 0.33 -0.3
113 AT4G36210 Protein of unknown function (DUF726) -0.8 0.3 -0.31
114 AT3G16940 calmodulin binding;transcription regulators -0.79 0.31 -0.32
115 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.79 0.29 -0.33
116 AT3G24740 Protein of unknown function (DUF1644) -0.79 0.34 -0.3
117 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.79 0.33 -0.3
118 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.79 0.31 -0.32
119 AT1G17550 homology to ABI2 homology to ABI2 -0.79 0.32 -0.32
120 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.79 0.33 -0.3
121 AT1G03080 kinase interacting (KIP1-like) family protein -0.79 0.32 -0.33
122 AT5G28520 Mannose-binding lectin superfamily protein -0.78 0.3 -0.31
123 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.78 0.32 -0.31
124 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 -0.77 0.31 -0.32
125 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.77 0.32 -0.32
126 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.77 0.31 -0.32
127 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.77 0.3 -0.32
128 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.75 0.3 -0.32
129 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.75 0.32 -0.32
130 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.74 0.32 -0.33
131 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.74 0.32 -0.31
132 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.74 0.32 -0.32
133 AT5G22850 Eukaryotic aspartyl protease family protein -0.73 0.32 -0.32
134 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.73 0.31 -0.31
135 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.3 -0.32
136 AT1G28260 Telomerase activating protein Est1 -0.73 0.31 -0.32
137 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.72 0.31 -0.3
138 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.72 0.3 -0.32
139 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.72 0.31 -0.31
140 AT3G07870 F-box and associated interaction domains-containing protein -0.72 0.32 -0.33
141 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.71 0.3 -0.33
142 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 -0.71 0.31 -0.3
143 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.71 0.32 -0.32
144 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.33
145 AT5G05570 transducin family protein / WD-40 repeat family protein -0.7 0.31 -0.32
146 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.7 0.32 -0.3
147 AT3G08020 PHD finger family protein -0.7 0.32 -0.32
148 AT4G26180 Mitochondrial substrate carrier family protein -0.7 0.33 -0.31
149 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.69 0.34 -0.31
150 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 -0.69 0.32 -0.31
151 AT1G69360 Plant protein of unknown function (DUF863) -0.69 0.31 -0.33
152 AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.68 0.31 -0.32
153 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 -0.68 0.32 -0.33
154 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.68 0.32 -0.32
155 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.68 0.3 -0.33
156 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.68 0.31 -0.33
157 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.68 0.34 -0.31
158 AT3G20290 EPS15 homology domain 1 EPS15 homology domain 1, EPS15
homology domain 1		 -0.68 0.33 -0.32
159 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.68 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
160 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.79 0.32 -0.31 C0260
161 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.76 0.3 -0.29 C0257
162 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.73 0.35 -0.36 C0054
163 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis -0.7 0.47 -0.42 C0193
164 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.7 0.31 -0.32 C0189