AGICode | AT5G45510 |
Description | Leucine-rich repeat (LRR) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G45510 | Leucine-rich repeat (LRR) family protein | 1 | 0.32 | -0.29 | |||
2 | AT3G54960 | PDI-like 1-3 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 1, PDI-like 1-3, PROTEIN DISULFIDE ISOMERASE 1, PDI-like 1-3 |
0.78 | 0.33 | -0.32 | ||
3 | AT5G20400 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.76 | 0.32 | -0.31 | |||
4 | AT4G23470 | PLAC8 family protein | 0.75 | 0.3 | -0.31 | |||
5 | AT2G03510 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
0.74 | 0.31 | -0.31 | |||
6 | AT5G46230 | Protein of unknown function, DUF538 | 0.74 | 0.3 | -0.33 | |||
7 | AT1G18480 | Calcineurin-like metallo-phosphoesterase superfamily protein |
AtSLP2, Shewenella-like protein phosphatase 2 |
0.72 | 0.32 | -0.32 | ||
8 | AT4G11850 | phospholipase D gamma 1 | maternal effect embryo arrest 54, phospholipase D gamma 1 |
0.72 | 0.31 | -0.33 | ||
9 | AT1G19360 | Nucleotide-diphospho-sugar transferase family protein | reduced residual arabinose 3 | 0.71 | 0.31 | -0.32 | ||
10 | AT3G09490 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.71 | 0.32 | -0.3 | |||
11 | AT5G47920 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.71 | 0.32 | -0.32 | |||
12 | AT1G23830 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.35 | -0.32 | |||
13 | AT1G44760 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.7 | 0.31 | -0.31 | |||
14 | AT2G29300 | NAD(P)-binding Rossmann-fold superfamily protein | -0.7 | 0.31 | -0.3 | |||
15 | AT4G25900 | Galactose mutarotase-like superfamily protein | 0.69 | 0.33 | -0.31 | |||
16 | AT5G54980 | Uncharacterised protein family (UPF0497) | -0.69 | 0.31 | -0.33 | |||
17 | AT5G44390 | FAD-binding Berberine family protein | 0.69 | 0.31 | -0.31 | |||
18 | AT1G32360 | Zinc finger (CCCH-type) family protein | -0.69 | 0.31 | -0.31 | |||
19 | AT1G80910 | Protein of unknown function (DUF1712) | 0.68 | 0.31 | -0.31 | |||
20 | AT3G56410 | Protein of unknown function (DUF3133) | 0.68 | 0.32 | -0.31 | |||
21 | AT1G67330 | Protein of unknown function (DUF579) | 0.68 | 0.32 | -0.31 | |||
22 | AT1G74210 | PLC-like phosphodiesterases superfamily protein | AtGDPD5, glycerophosphodiester phosphodiesterase 5 |
0.68 | 0.34 | -0.3 | ||
23 | AT3G59920 | RAB GDP dissociation inhibitor 2 | RAB GDP dissociation inhibitor 2, RAB GDP dissociation inhibitor 2 |
0.68 | 0.31 | -0.31 | ||
24 | AT2G20780 | Major facilitator superfamily protein | 0.67 | 0.32 | -0.31 | |||
25 | AT3G04080 | apyrase 1 | apyrase 1, apyrase 1 | 0.67 | 0.31 | -0.29 | ||
26 | AT3G01370 | CRM family member 2 | Arabidopsis thaliana CRM family member 2, CRM family member 2 |
-0.67 | 0.33 | -0.33 | ||
27 | AT1G28100 | unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.67 | 0.31 | -0.33 | |||
28 | AT2G39210 | Major facilitator superfamily protein | 0.67 | 0.31 | -0.31 | |||
29 | AT5G58590 | RAN binding protein 1 | RAN binding protein 1 | 0.67 | 0.32 | -0.31 | ||
30 | AT5G20480 | EF-TU receptor | EF-TU receptor | 0.67 | 0.32 | -0.31 | ||
31 | AT4G17720 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.67 | 0.3 | -0.32 | |||
32 | AT1G29700 | Metallo-hydrolase/oxidoreductase superfamily protein | -0.66 | 0.31 | -0.36 | |||
33 | AT4G12970 | stomagen | EPFL9, STOMAGEN | -0.66 | 0.31 | -0.32 | ||
34 | AT5G25490 | Ran BP2/NZF zinc finger-like superfamily protein | -0.66 | 0.33 | -0.32 | |||
35 | AT4G33500 | Protein phosphatase 2C family protein | -0.65 | 0.32 | -0.31 | |||
36 | AT5G16180 | ortholog of maize chloroplast splicing factor CRS1 | ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1, ortholog of maize chloroplast splicing factor CRS1 |
-0.65 | 0.3 | -0.31 | ||
37 | AT4G24800 | MA3 domain-containing protein | EIN2 C-terminus Interacting Protein 1 |
-0.65 | 0.34 | -0.28 | ||
38 | AT3G51950 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein |
-0.65 | 0.31 | -0.3 | |||
39 | AT5G42860 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.35 | -0.31 | |||
40 | AT2G34140 | Dof-type zinc finger DNA-binding family protein | 0.64 | 0.32 | -0.3 | |||
41 | AT1G15570 | CYCLIN A2;3 | CYCLIN A2;3 | -0.64 | 0.3 | -0.29 | ||
42 | AT5G44910 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.64 | 0.33 | -0.31 | |||
43 | AT5G47040 | lon protease 2 | lon protease 2 | -0.64 | 0.29 | -0.32 | ||
44 | AT3G01720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). |
0.64 | 0.31 | -0.3 | |||
45 | AT5G17060 | ADP-ribosylation factor B1B | ADP-ribosylation factor B1B, ADP-ribosylation factor B1B |
0.64 | 0.31 | -0.31 | ||
46 | AT5G08430 | SWIB/MDM2 domain;Plus-3;GYF | -0.63 | 0.31 | -0.3 | |||
47 | AT5G60950 | COBRA-like protein 5 precursor | COBRA-like protein 5 precursor | 0.63 | 0.32 | -0.32 | ||
48 | ATCG01100 | NADH dehydrogenase family protein | NDHA | -0.63 | 0.31 | -0.33 | ||
49 | AT5G46880 | homeobox-7 | homeobox-7, HOMEODOMAIN GLABROUS 5 | -0.63 | 0.33 | -0.3 | ||
50 | AT5G18100 | copper/zinc superoxide dismutase 3 | copper/zinc superoxide dismutase 3 | -0.63 | 0.33 | -0.32 | ||
51 | AT4G01700 | Chitinase family protein | 0.63 | 0.34 | -0.3 | |||
52 | AT1G70140 | formin 8 | formin 8, formin 8 | 0.63 | 0.32 | -0.32 | ||
53 | AT3G14980 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
-0.62 | 0.29 | -0.31 | |||
54 | AT3G01290 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
AtHIR2, hypersensitive induced reaction 2 |
0.62 | 0.3 | -0.33 | ||
55 | ATCG00770 | ribosomal protein S8 | ribosomal protein S8 | -0.62 | 0.31 | -0.3 | ||
56 | AT2G04460 | transposable element gene | 0.62 | 0.31 | -0.3 | |||
57 | AT1G80800 | pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum vulgare); blastp match of 65% identity and 4.7e-12 P-value to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S ribosomal protein S12 {Oryza sativa (japonica cultivar-group)} |
-0.62 | 0.33 | -0.31 | |||
58 | AT2G43800 | Actin-binding FH2 (formin homology 2) family protein | -0.62 | 0.34 | -0.31 | |||
59 | AT1G11330 | S-locus lectin protein kinase family protein | 0.62 | 0.3 | -0.31 | |||
60 | AT3G57470 | Insulinase (Peptidase family M16) family protein | -0.61 | 0.31 | -0.31 | |||
61 | AT5G35170 | adenylate kinase family protein | -0.61 | 0.31 | -0.32 | |||
62 | AT1G23140 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.61 | 0.34 | -0.32 | |||
63 | AT3G20930 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.61 | 0.29 | -0.3 | |||
64 | AT1G64170 | cation/H+ exchanger 16 | cation/H+ exchanger 16, cation/H+ exchanger 16 |
0.61 | 0.32 | -0.3 | ||
65 | AT2G28305 | Putative lysine decarboxylase family protein | ATLOG1, LONELY GUY 1 | -0.61 | 0.34 | -0.31 | ||
66 | AT3G06300 | P4H isoform 2 | P4H isoform 2, prolyl 4-hydroxylase 2 |
0.61 | 0.3 | -0.32 | ||
67 | ATCG00740 | RNA polymerase subunit alpha | RNA polymerase subunit alpha | -0.6 | 0.31 | -0.32 | ||
68 | ATCG01050 | NADH-Ubiquinone/plastoquinone (complex I) protein | NDHD | -0.6 | 0.33 | -0.31 | ||
69 | AT3G19920 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits to 217 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.3 | |||
70 | AT4G35180 | LYS/HIS transporter 7 | LYS/HIS transporter 7 | 0.6 | 0.31 | -0.34 | ||
71 | AT1G66140 | zinc finger protein 4 | zinc finger protein 4 | -0.6 | 0.33 | -0.31 | ||
72 | AT2G46140 | Late embryogenesis abundant protein | 0.6 | 0.34 | -0.31 | |||
73 | ATCG01110 | NAD(P)H dehydrogenase subunit H | NAD(P)H dehydrogenase subunit H | -0.6 | 0.32 | -0.3 | ||
74 | AT3G05350 | Metallopeptidase M24 family protein | -0.59 | 0.31 | -0.32 | |||
75 | AT2G25900 | Zinc finger C-x8-C-x5-C-x3-H type family protein | ATCTH, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 |
-0.59 | 0.31 | -0.31 | ||
76 | AT3G12460 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.59 | 0.32 | -0.32 | |||
77 | ATCG00540 | photosynthetic electron transfer A | photosynthetic electron transfer A | -0.59 | 0.33 | -0.31 | ||
78 | ATCG00340 | Photosystem I, PsaA/PsaB protein | PSAB | -0.59 | 0.33 | -0.34 | ||
79 | ATCG00760 | ribosomal protein L36 | ribosomal protein L36 | -0.59 | 0.33 | -0.35 | ||
80 | AT1G04950 | TATA BOX ASSOCIATED FACTOR II 59 | ATTAF6, EMBRYO DEFECTIVE 2781, TBP-associated factor 6, TATA BOX ASSOCIATED FACTOR II 59 |
-0.59 | 0.33 | -0.3 | ||
81 | AT1G01570 | Protein of unknown function (DUF604) | -0.59 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
82 | C0010 | myo-Inositol-1-phosphate | D,L-myo-Inositol-1-phosphate | 1D-myo-Inositol (3)-phosphate | myo-inositol biosynthesis, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) |
-0.81 | 0.45 | -0.44 | ||
83 | C0003 | α-Tocopherol | - | alpha-Tocopherol | vitamin E biosynthesis | -0.76 | 0.45 | -0.44 | ||
84 | C0239 | Spermidine | - | Spermidine | spermine biosynthesis, spermine and spermidine degradation III, beta-alanine biosynthesis I, hypusine biosynthesis, spermidine hydroxycinnamic acid conjugates biosynthesis, spermidine biosynthesis I |
0.65 | 0.43 | -0.45 |