AT5G45130 : ARABIDOPSIS RAB HOMOLOG F2A
Query Information
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AGICode AT5G45130
Description RAB homolog 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 1 0.32 -0.3
2 AT4G20330 Transcription initiation factor TFIIE, beta subunit 0.87 0.31 -0.33
3 AT5G12890 UDP-Glycosyltransferase superfamily protein 0.86 0.31 -0.31
4 AT3G08690 ubiquitin-conjugating enzyme 11 ATUBC11, ubiquitin-conjugating
enzyme 11		 0.85 0.32 -0.32
5 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.85 0.31 -0.33
6 AT3G21610 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.85 0.32 -0.31
7 AT1G45150 unknown protein; Has 219 Blast hits to 202 proteins in 78
species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi -
0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source:
NCBI BLink).		 0.85 0.3 -0.3
8 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.85 0.32 -0.31
9 AT3G48890 membrane-associated progesterone binding protein 3 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 3, ATMP2,
membrane-associated progesterone
binding protein 3, MEMBRANE
STEROID BINDING PROTEIN 2		 0.83 0.31 -0.32
10 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 0.83 0.34 -0.33
11 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 0.83 0.3 -0.33
12 AT2G39725 LYR family of Fe/S cluster biogenesis protein 0.83 0.31 -0.3
13 AT4G19640 Ras-related small GTP-binding family protein ARA-7, ARA7, ARABIDOPSIS RAB
GTPASE HOMOLOG F2B, ATRAB5B,
ATRABF2B, RAB GTPASE HOMOLOG F2B,
RABF2B		 0.83 0.32 -0.32
14 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 0.83 0.32 -0.32
15 AT1G71100 Ribose 5-phosphate isomerase, type A protein RADIAL SWELLING 10 0.83 0.33 -0.31
16 AT1G17080 Ribosomal protein L18ae family 0.83 0.31 -0.34
17 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.82 0.3 -0.32
18 AT5G59140 BTB/POZ domain-containing protein 0.82 0.31 -0.31
19 AT3G18820 RAB GTPase homolog G3F RAB GTPase homolog G3F, ATRABG3F,
RAB71, RAB7B, RAB GTPase homolog
G3F, RABG3F		 0.82 0.29 -0.32
20 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 0.82 0.31 -0.31
21 AT1G01820 peroxin 11c peroxin 11c 0.82 0.31 -0.33
22 AT3G09085 Protein of unknown function (DUF962) 0.82 0.32 -0.31
23 AT3G12740 ALA-interacting subunit 1 ALA-interacting subunit 1 0.82 0.33 -0.32
24 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 0.82 0.31 -0.31
25 AT2G21270 ubiquitin fusion degradation 1 ubiquitin fusion degradation 1 0.82 0.31 -0.35
26 AT3G53970 proteasome inhibitor-related 0.81 0.33 -0.32
27 AT4G29160 SNF7 family protein SNF7.1 0.81 0.35 -0.33
28 AT4G24990 Ubiquitin family protein ATGP4 0.81 0.33 -0.3
29 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 0.81 0.3 -0.29
30 AT2G01470 SEC12P-like 2 protein ATSEC12, SEC12P-like 2 protein 0.81 0.31 -0.32
31 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.81 0.33 -0.31
32 AT5G61530 small G protein family protein / RhoGAP family protein 0.81 0.32 -0.33
33 AT1G68300 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.81 0.34 -0.3
34 AT1G16180 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.81 0.35 -0.3
35 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like 0.81 0.31 -0.3
36 AT2G24360 Protein kinase superfamily protein 0.81 0.34 -0.35
37 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 0.81 0.3 -0.33
38 AT3G17880 tetraticopeptide domain-containing thioredoxin ARABIDOPSIS THALIANA
HSP70-INTERACTING PROTEIN 2,
tetraticopeptide domain-containing
thioredoxin, HSC-70 INTERACTING
PROTEIN, tetraticopeptide
domain-containing thioredoxin		 0.8 0.32 -0.32
39 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 0.8 0.31 -0.32
40 AT2G37110 PLAC8 family protein 0.79 0.33 -0.32
41 AT5G53330 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.79 0.31 -0.33
42 AT2G34810 FAD-binding Berberine family protein 0.79 0.31 -0.32
43 AT1G22280 phytochrome-associated protein phosphatase type 2C phytochrome-associated protein
phosphatase type 2C		 0.79 0.32 -0.35
44 AT4G10970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.79 0.35 -0.33
45 AT5G63880 SNF7 family protein VPS20.1 0.79 0.3 -0.31
46 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.79 0.32 -0.3
47 AT4G31170 Protein kinase superfamily protein 0.79 0.3 -0.3
48 AT1G29060 Target SNARE coiled-coil domain protein 0.79 0.31 -0.32
49 AT2G34680 Outer arm dynein light chain 1 protein AUXIN-INDUCED IN ROOT CULTURES 9 -0.79 0.3 -0.32
50 AT3G55140 Pectin lyase-like superfamily protein 0.79 0.31 -0.32
51 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.79 0.32 -0.32
52 AT1G21760 F-box protein 7 F-BOX PROTEIN 7, F-box protein 7 0.78 0.29 -0.34
53 AT2G19200 unknown protein -0.78 0.29 -0.32
54 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.32 -0.31
55 AT1G04960 Protein of unknown function (DUF1664) 0.78 0.31 -0.3
56 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein -0.78 0.3 -0.31
57 AT5G37070 Protein of unknown function, DUF538 0.78 0.32 -0.33
58 AT3G20260 Protein of unknown function (DUF1666) -0.78 0.3 -0.32
59 AT3G61980 serine protease inhibitor, Kazal-type family protein 0.78 0.31 -0.31
60 AT3G03740 BTB-POZ and MATH domain 4 BTB-POZ AND MATH DOMAIN 4, BTB-POZ
and MATH domain 4		 0.78 0.32 -0.33
61 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a 0.78 0.31 -0.3
62 AT2G36330 Uncharacterised protein family (UPF0497) 0.78 0.33 -0.33
63 AT5G22950 SNF7 family protein VPS24.1 0.78 0.32 -0.32
64 AT1G75300 NmrA-like negative transcriptional regulator family protein 0.77 0.3 -0.33
65 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.77 0.32 -0.33
66 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.77 0.31 -0.31
67 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 0.77 0.28 -0.31
68 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 0.77 0.33 -0.3
69 AT4G07390 Mannose-P-dolichol utilization defect 1 protein 0.77 0.33 -0.33
70 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 -0.77 0.33 -0.32
71 AT4G10100 co-factor for nitrate, reductase and xanthine dehydrogenase
7		 co-factor for nitrate, reductase
and xanthine dehydrogenase 7, SIR5		 0.77 0.32 -0.33
72 AT2G01710 Chaperone DnaJ-domain superfamily protein 0.77 0.29 -0.31
73 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 0.77 0.3 -0.31
74 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.77 0.33 -0.33
75 AT1G16210 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1014 (InterPro:IPR010422); Has 16107
Blast hits to 8386 proteins in 1107 species: Archae - 26;
Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants -
526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI
BLink).		 0.77 0.3 -0.35
76 AT5G57060 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
defense response to Gram-negative bacterium, cytolysis;
LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Channel forming colicin, C-terminal
cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana
protein match is: Ribosomal protein L18ae family
(TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.77 0.31 -0.31
77 AT5G52240 membrane steroid binding protein 1 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 5, ATMP1, membrane
steroid binding protein 1		 0.76 0.29 -0.32
78 AT5G13160 Protein kinase superfamily protein avrPphB susceptible 1 0.76 0.28 -0.32
79 AT1G23730 beta carbonic anhydrase 3 BETA CARBONIC ANHYDRASE 3, beta
carbonic anhydrase 3		 0.76 0.28 -0.31
80 AT3G06760 Drought-responsive family protein 0.76 0.32 -0.3
81 AT3G18430 Calcium-binding EF-hand family protein 0.76 0.31 -0.31
82 AT1G25370 Protein of unknown function (DUF1639) 0.76 0.3 -0.31
83 AT2G02810 UDP-galactose transporter 1 UDP-GALACTOSE TRANSPORTER 1,
UDP-galactose transporter 1		 0.76 0.3 -0.32
84 AT1G02170 metacaspase 1 ARABIDOPSIS THALIANA METACASPASE
1, metacaspase 1b, ARABIDOPSIS
THALIANA METACASPASE 1B, LSD ONE
LIKE 3, metacaspase 1, metacaspase
1b		 0.76 0.33 -0.33
85 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 0.76 0.31 -0.31
86 AT2G38710 AMMECR1 family 0.76 0.3 -0.3
87 AT3G19640 magnesium transporter 4 magnesium transporter 4, MRS2-3 0.76 0.32 -0.32
88 AT3G19010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.76 0.3 -0.29
89 AT1G49580 Calcium-dependent protein kinase (CDPK) family protein -0.76 0.33 -0.31
90 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein -0.76 0.33 -0.31
91 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein -0.75 0.3 -0.31
92 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.75 0.31 -0.32
93 AT2G28310 Protein of unknown function (DUF707) -0.75 0.33 -0.31
94 AT5G27440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.75 0.32 -0.29
95 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 -0.75 0.29 -0.32
96 AT4G35440 chloride channel E ATCLC-E, chloride channel E,
CHLORIDE CHANNEL E		 -0.75 0.32 -0.32
97 AT1G63480 AT hook motif DNA-binding family protein -0.75 0.32 -0.32
98 AT3G16260 tRNAse Z4 tRNAse Z4 -0.75 0.31 -0.34
99 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 -0.74 0.31 -0.31
100 AT2G36730 Pentatricopeptide repeat (PPR) superfamily protein -0.74 0.31 -0.28
101 AT1G11070 BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in
152 species: Archae - 0; Bacteria - 68; Metazoa - 159;
Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes -
67 (source: NCBI BLink).		 -0.74 0.33 -0.29
102 AT5G07810 SNF2 domain-containing protein / helicase domain-containing
protein / HNH endonuclease domain-containing protein		 -0.74 0.33 -0.28
103 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED -0.74 0.32 -0.31
104 AT1G26540 Agenet domain-containing protein -0.73 0.3 -0.33
105 AT5G27940 WPP domain protein 3 WPP domain protein 3 -0.72 0.31 -0.3
106 AT4G29750 CRS1 / YhbY (CRM) domain-containing protein -0.72 0.33 -0.33
107 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.72 0.3 -0.32
108 AT5G46570 BR-signaling kinase 2 BR-signaling kinase 2 -0.72 0.32 -0.32
109 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.72 0.3 -0.32
110 AT1G30600 Subtilase family protein -0.72 0.31 -0.32
111 AT1G55540 Nuclear pore complex protein -0.72 0.32 -0.35
112 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.71 0.32 -0.31
113 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.71 0.3 -0.31
114 AT1G10750 Protein of Unknown Function (DUF239) -0.71 0.33 -0.32
115 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 -0.71 0.3 -0.32
116 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.71 0.31 -0.31
117 AT1G61010 cleavage and polyadenylation specificity factor 73-I cleavage and polyadenylation
specificity factor 73-I		 -0.71 0.34 -0.31
118 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 -0.71 0.31 -0.3
119 AT2G07490 transposable element gene -0.71 0.33 -0.33
120 AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 84 -0.71 0.31 -0.33
121 AT5G17160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast
hits to 10381 proteins in 896 species: Archae - 94;
Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants -
515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI
BLink).		 -0.7 0.3 -0.31
122 AT5G03870 Glutaredoxin family protein -0.7 0.33 -0.3
123 AT1G77720 putative protein kinase 1 putative protein kinase 1 -0.69 0.31 -0.3
124 AT5G59360 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.69 0.32 -0.31
125 AT1G17460 TRF-like 3 TRF-like 3 -0.69 0.31 -0.34
126 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.68 0.32 -0.33
127 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.31 -0.31
128 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.32
129 AT2G15130 Plant basic secretory protein (BSP) family protein -0.68 0.32 -0.31
130 AT5G37040 F-box family protein -0.68 0.33 -0.32
131 AT4G39110 Malectin/receptor-like protein kinase family protein -0.67 0.32 -0.3
132 AT1G64260 MuDR family transposase -0.67 0.32 -0.31
133 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.31
134 AT1G62085 Mitochondrial transcription termination factor family
protein		 -0.67 0.33 -0.34
135 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 -0.67 0.3 -0.28
136 AT4G32450 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.31 -0.31
137 AT1G70940 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 3,
PIN-FORMED 3		 -0.67 0.31 -0.29
138 AT3G25500 formin homology 1 formin homology 1, AHF1,
ARABIDOPSIS THALIANA FORMIN
HOMOLOGY 1, FORMIN HOMOLOGY 1		 -0.67 0.32 -0.33
139 AT2G38590 F-box and associated interaction domains-containing protein -0.67 0.33 -0.3
140 AT2G41550 Rho termination factor -0.67 0.32 -0.31
141 AT2G21480 Malectin/receptor-like protein kinase family protein -0.67 0.31 -0.34