AT5G44650 : Arabidopsis thaliana chloroplast protein-enhancing stress tolerance.....
Query Information
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AGICode AT5G44650
Description Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 1 0.32 -0.34
2 AT4G17740 Peptidase S41 family protein 0.94 0.29 -0.32
3 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.94 0.31 -0.3
4 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.93 0.34 -0.31
5 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.93 0.33 -0.33
6 AT5G66470 RNA binding;GTP binding 0.93 0.33 -0.32
7 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.93 0.33 -0.32
8 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.93 0.32 -0.33
9 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.93 0.32 -0.31
10 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.92 0.34 -0.31
11 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.92 0.31 -0.28
12 AT1G60000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.92 0.34 -0.32
13 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.92 0.32 -0.34
14 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.92 0.3 -0.32
15 AT2G24060 Translation initiation factor 3 protein 0.92 0.32 -0.3
16 AT4G37510 Ribonuclease III family protein 0.92 0.31 -0.33
17 AT1G49380 cytochrome c biogenesis protein family 0.92 0.33 -0.33
18 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.92 0.33 -0.31
19 AT4G38970 fructose-bisphosphate aldolase 2 fructose-bisphosphate aldolase 2 0.92 0.34 -0.3
20 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.91 0.32 -0.33
21 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.91 0.3 -0.33
22 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.91 0.32 -0.3
23 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.91 0.33 -0.31
24 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.91 0.32 -0.31
25 AT1G26230 TCP-1/cpn60 chaperonin family protein chaperonin-60beta4 0.91 0.3 -0.3
26 AT2G06520 photosystem II subunit X photosystem II subunit X 0.91 0.33 -0.32
27 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.91 0.31 -0.32
28 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.91 0.31 -0.32
29 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.91 0.34 -0.29
30 AT3G55800 sedoheptulose-bisphosphatase sedoheptulose-bisphosphatase 0.91 0.3 -0.32
31 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.9 0.29 -0.32
32 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.9 0.32 -0.31
33 AT3G29185 Domain of unknown function (DUF3598) 0.9 0.32 -0.31
34 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.9 0.33 -0.33
35 AT4G26370 antitermination NusB domain-containing protein 0.9 0.31 -0.33
36 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB
domain-containing protein		 0.9 0.31 -0.34
37 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.9 0.3 -0.33
38 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.9 0.31 -0.32
39 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.33 -0.31
40 AT3G01480 cyclophilin 38 ARABIDOPSIS CYCLOPHILIN 38,
cyclophilin 38		 0.9 0.32 -0.29
41 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.9 0.33 -0.32
42 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.9 0.29 -0.3
43 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.9 0.3 -0.32
44 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.9 0.32 -0.31
45 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.9 0.29 -0.32
46 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.9 0.32 -0.33
47 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.9 0.3 -0.32
48 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.9 0.32 -0.3
49 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.89 0.31 -0.32
50 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.89 0.3 -0.32
51 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.89 0.32 -0.32
52 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.89 0.32 -0.3
53 AT3G01660 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.89 0.32 -0.3
54 AT5G48220 Aldolase-type TIM barrel family protein 0.89 0.32 -0.33
55 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.89 0.3 -0.3
56 AT1G06680 photosystem II subunit P-1 OXYGEN EVOLVING COMPLEX SUBUNIT 23
KDA, OXYGEN-EVOLVING ENHANCER
PROTEIN 2, photosystem II subunit
P-1, PHOTOSYSTEM II SUBUNIT P		 0.89 0.32 -0.32
57 AT3G51820 UbiA prenyltransferase family protein ATG4, CHLG, G4, PIGMENT DEFECTIVE
325		 0.89 0.32 -0.32
58 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.89 0.32 -0.32
59 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.89 0.31 -0.32
60 AT1G32550 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1 0.89 0.32 -0.3
61 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.89 0.29 -0.28
62 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.34 -0.3
63 AT5G63050 embryo defective 2759 embryo defective 2759 0.89 0.3 -0.31
64 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.89 0.31 -0.33
65 AT1G11860 Glycine cleavage T-protein family 0.89 0.33 -0.29
66 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.89 0.3 -0.31
67 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.89 0.3 -0.3
68 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.89 0.3 -0.3
69 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.89 0.3 -0.3
70 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.89 0.31 -0.32
71 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.89 0.3 -0.32
72 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 glyceraldehyde 3-phosphate
dehydrogenase A subunit 2		 0.88 0.3 -0.29
73 AT4G34290 SWIB/MDM2 domain superfamily protein 0.88 0.32 -0.31
74 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.88 0.31 -0.32
75 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.88 0.31 -0.31
76 AT2G30390 ferrochelatase 2 ATFC-II, FC-II, ferrochelatase 2 0.88 0.32 -0.31
77 AT1G17220 Translation initiation factor 2, small GTP-binding protein fu-gaeri1 0.88 0.3 -0.31
78 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.88 0.32 -0.33
79 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 25
Blast hits to 25 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.88 0.3 -0.31
80 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.88 0.32 -0.32
81 AT1G60230 Radical SAM superfamily protein 0.88 0.29 -0.29
82 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.88 0.33 -0.31
83 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.88 0.32 -0.3
84 AT2G43030 Ribosomal protein L3 family protein 0.88 0.31 -0.33
85 AT5G08050 Protein of unknown function (DUF1118) 0.88 0.33 -0.3
86 AT5G62840 Phosphoglycerate mutase family protein 0.88 0.3 -0.31
87 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.88 0.32 -0.34
88 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.88 0.3 -0.33
89 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.32 -0.31
90 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.88 0.31 -0.31
91 AT1G55670 photosystem I subunit G photosystem I subunit G 0.88 0.31 -0.32
92 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.88 0.31 -0.31
93 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.88 0.33 -0.33
94 AT5G57030 Lycopene beta/epsilon cyclase protein LUTEIN DEFICIENT 2 0.88 0.28 -0.3
95 AT3G45010 serine carboxypeptidase-like 48 serine carboxypeptidase-like 48 -0.83 0.3 -0.33
96 AT1G29330 ER lumen protein retaining receptor family protein ARABIDOPSIS ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ARABIDOPSIS
THALIANA ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ENDOPLASMIC
RETICULUM RETENTION DEFECTIVE 2		 -0.81 0.3 -0.32
97 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.8 0.3 -0.3
98 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.79 0.31 -0.31
99 AT5G06750 Protein phosphatase 2C family protein -0.79 0.32 -0.31
100 AT2G17500 Auxin efflux carrier family protein -0.77 0.32 -0.31
101 AT5G02170 Transmembrane amino acid transporter family protein -0.77 0.31 -0.31
102 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.77 0.32 -0.31
103 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.76 0.32 -0.34
104 AT5G59510 ROTUNDIFOLIA like 5 DEVIL 18, ROTUNDIFOLIA like 5 -0.76 0.31 -0.3
105 AT5G09980 elicitor peptide 4 precursor elicitor peptide 4 precursor -0.76 0.3 -0.33
106 AT1G05620 uridine-ribohydrolase 2 nucleoside hydrolase 2,
uridine-ribohydrolase 2		 -0.76 0.33 -0.31
107 AT1G66760 MATE efflux family protein -0.76 0.32 -0.31
108 AT1G68140 Protein of unknown function (DUF1644) -0.75 0.35 -0.29
109 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.75 0.32 -0.29
110 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.33 -0.3
111 AT4G09030 arabinogalactan protein 10 arabinogalactan protein 10,
ATAGP10		 -0.74 0.35 -0.3
112 AT1G23040 hydroxyproline-rich glycoprotein family protein -0.74 0.32 -0.33
113 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.73 0.32 -0.29
114 AT5G22630 arogenate dehydratase 5 arogenate dehydratase 5 -0.73 0.3 -0.34
115 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.73 0.33 -0.35
116 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.72 0.32 -0.34
117 AT3G04560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 16 growth stages; Has
227 Blast hits to 225 proteins in 83 species: Archae - 0;
Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51;
Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).		 -0.72 0.31 -0.31
118 AT1G52140 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits
to 114 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.33 -0.33
119 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.71 0.31 -0.31
120 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.71 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.79 0.45 -0.44 C0120