AT5G43960 : -
Query Information
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AGICode AT5G43960
Description Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 1 0.32 -0.34
2 AT1G60080 3'-5'-exoribonuclease family protein 0.89 0.31 -0.31
3 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.87 0.31 -0.32
4 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.83 0.32 -0.32
5 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.83 0.31 -0.3
6 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.82 0.31 -0.33
7 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.82 0.33 -0.32
8 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.82 0.33 -0.34
9 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.82 0.3 -0.31
10 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.82 0.33 -0.29
11 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 0.81 0.35 -0.33
12 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.81 0.32 -0.33
13 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.31
14 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.81 0.33 -0.31
15 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.81 0.3 -0.33
16 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.81 0.31 -0.32
17 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.8 0.32 -0.3
18 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 0.8 0.33 -0.32
19 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 0.8 0.3 -0.32
20 AT2G01640 unknown protein; Has 51 Blast hits to 51 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.8 0.3 -0.32
21 AT3G55510 Noc2p family REBELOTE 0.8 0.3 -0.33
22 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.8 0.32 -0.31
23 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.8 0.31 -0.31
24 AT3G10250 Plant protein 1589 of unknown function -0.79 0.31 -0.3
25 AT4G38710 glycine-rich protein 0.79 0.29 -0.31
26 AT5G57020 myristoyl-CoA:protein N-myristoyltransferase ARABIDOPSIS THALIANA
MYRISTOYL-COA:PROTEIN
N-MYRISTOYLTRANSFERASE,
myristoyl-CoA:protein
N-myristoyltransferase		 0.79 0.3 -0.33
27 AT5G41670 6-phosphogluconate dehydrogenase family protein 0.79 0.31 -0.33
28 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.79 0.3 -0.32
29 AT4G32720 La protein 1 La protein 1, La protein 1 0.79 0.32 -0.33
30 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.79 0.32 -0.33
31 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.79 0.32 -0.34
32 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.79 0.32 -0.32
33 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 -0.78 0.32 -0.33
34 AT3G23940 dehydratase family 0.78 0.31 -0.32
35 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 0.78 0.31 -0.31
36 AT1G19450 Major facilitator superfamily protein 0.78 0.32 -0.3
37 AT2G18220 Noc2p family 0.78 0.34 -0.33
38 AT3G58660 Ribosomal protein L1p/L10e family 0.78 0.35 -0.33
39 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.77 0.31 -0.3
40 AT3G15460 Ribosomal RNA processing Brix domain protein 0.77 0.3 -0.32
41 AT5G46290 3-ketoacyl-acyl carrier protein synthase I KETOACYL-ACP SYNTHASE 1,
3-ketoacyl-acyl carrier protein
synthase I		 0.77 0.3 -0.31
42 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.77 0.32 -0.33
43 AT1G21000 PLATZ transcription factor family protein -0.76 0.33 -0.33
44 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.76 0.32 -0.33
45 AT3G02530 TCP-1/cpn60 chaperonin family protein 0.76 0.33 -0.29
46 AT1G13030 sphere organelles protein-related 0.76 0.31 -0.34
47 AT5G47070 Protein kinase superfamily protein -0.76 0.3 -0.31
48 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.76 0.32 -0.32
49 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.75 0.31 -0.32
50 AT3G14790 rhamnose biosynthesis 3 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 3, rhamnose
biosynthesis 3		 0.75 0.32 -0.3
51 AT1G15810 S15/NS1, RNA-binding protein 0.75 0.33 -0.34
52 AT4G26300 Arginyl-tRNA synthetase, class Ic embryo defective 1027 0.75 0.31 -0.32
53 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.34 -0.33
54 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.75 0.32 -0.3
55 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.75 0.32 -0.32
56 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.74 0.33 -0.31
57 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.74 0.32 -0.33
58 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.74 0.31 -0.33
59 AT5G04760 Duplicated homeodomain-like superfamily protein -0.74 0.3 -0.33
60 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.74 0.31 -0.33
61 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.74 0.33 -0.31
62 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 0.74 0.32 -0.3
63 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.74 0.32 -0.33
64 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.74 0.32 -0.33
65 AT5G12200 pyrimidine 2 pyrimidine 2 -0.73 0.32 -0.31
66 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.73 0.31 -0.34
67 AT3G06780 glycine-rich protein -0.73 0.31 -0.32
68 AT1G73040 Mannose-binding lectin superfamily protein -0.73 0.31 -0.33
69 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.73 0.32 -0.31
70 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 -0.72 0.3 -0.33
71 AT2G15230 lipase 1 lipase 1, lipase 1 -0.71 0.33 -0.31
72 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.7 0.31 -0.32
73 AT2G42950 Magnesium transporter CorA-like family protein -0.7 0.3 -0.31
74 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 -0.7 0.35 -0.31
75 AT5G45350 proline-rich family protein -0.69 0.33 -0.32
76 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.29
77 AT3G45770 Polyketide synthase, enoylreductase family protein -0.68 0.3 -0.32
78 AT1G70590 F-box family protein -0.68 0.33 -0.32
79 AT1G50740 Transmembrane proteins 14C -0.68 0.32 -0.32
80 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.68 0.3 -0.33
81 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.67 0.31 -0.3
82 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.67 0.3 -0.33
83 AT4G29420 F-box/RNI-like superfamily protein -0.67 0.32 -0.34
84 AT2G31800 Integrin-linked protein kinase family -0.67 0.33 -0.33
85 AT1G22985 Integrase-type DNA-binding superfamily protein cytokinin response factor 7 -0.66 0.33 -0.3
86 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.65 0.3 -0.32
87 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.3
88 AT3G19280 fucosyltransferase 11 ATFUT11, FUCT1, FUCTA,
fucosyltransferase 11		 -0.65 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine 0.78 0.46 -0.43 C0050