AT5G42840 : -
Query Information
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AGICode AT5G42840
Description Cysteine/Histidine-rich C1 domain family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G42840 Cysteine/Histidine-rich C1 domain family protein 1 0.29 -0.29
2 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 -0.76 0.32 -0.33
3 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 -0.67 0.31 -0.3
4 AT4G32551 LisH dimerisation motif;WD40/YVTN repeat-like-containing
domain		 LEUNIG, ROTUNDA 2 -0.66 0.32 -0.3
5 AT5G60460 Preprotein translocase Sec, Sec61-beta subunit protein 0.64 0.34 -0.31
6 AT3G59800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast
hits to 8061 proteins in 537 species: Archae - 2; Bacteria
- 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses
- 49; Other Eukaryotes - 4961 (source: NCBI BLink).		 -0.63 0.29 -0.32
7 AT5G02840 LHY/CCA1-like 1 LHY/CCA1-like 1 -0.63 0.31 -0.32
8 AT4G32190 Myosin heavy chain-related protein -0.63 0.33 -0.33
9 AT2G16860 GCIP-interacting family protein -0.62 0.3 -0.29
10 AT3G47295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.33
11 AT5G39850 Ribosomal protein S4 0.62 0.3 -0.31
12 AT1G56010 NAC domain containing protein 1 Arabidopsis NAC domain containing
protein 21, Arabidopsis NAC domain
containing protein 22, NAC domain
containing protein 1		 0.62 0.28 -0.3
13 AT2G27110 FAR1-related sequence 3 FAR1-related sequence 3 -0.62 0.31 -0.31
14 AT1G70610 transporter associated with antigen processing protein 1 ATP-binding cassette B26,
transporter associated with
antigen processing protein 1,
transporter associated with
antigen processing protein 1		 -0.61 0.32 -0.31
15 AT4G19420 Pectinacetylesterase family protein 0.61 0.31 -0.31
16 AT1G31820 Amino acid permease family protein 0.61 0.3 -0.35
17 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 -0.61 0.31 -0.31
18 AT5G18840 Major facilitator superfamily protein 0.61 0.32 -0.32
19 AT1G69970 CLAVATA3/ESR-RELATED 26 CLAVATA3/ESR-RELATED 26 -0.6 0.29 -0.33
20 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 -0.6 0.3 -0.31
21 AT5G44820 Nucleotide-diphospho-sugar transferase family protein 0.6 0.3 -0.32
22 AT2G43190 ribonuclease P family protein -0.6 0.31 -0.32
23 AT4G39800 myo-inositol-1-phosphate synthase 1 INOSITOL 3-PHOSPHATE SYNTHASE 1,
MYO-INOSITOL-1-PHOSPHATE SYNTHASE
1, MI-1-P SYNTHASE, D-myo-Inositol
3-Phosphate Synthase 1,
myo-inositol-1-phosphate synthase
1		 -0.6 0.31 -0.31
24 AT3G56760 Protein kinase superfamily protein -0.6 0.3 -0.32
25 AT1G19880 Regulator of chromosome condensation (RCC1) family protein -0.59 0.31 -0.31
26 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 0.59 0.29 -0.31
27 AT1G35510 O-fucosyltransferase family protein -0.59 0.3 -0.3
28 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 0.59 0.33 -0.32
29 AT3G09920 phosphatidyl inositol monophosphate 5 kinase phosphatidyl inositol
monophosphate 5 kinase		 -0.58 0.33 -0.32
30 AT2G46830 circadian clock associated 1 AtCCA1, circadian clock associated
1		 -0.58 0.33 -0.33
31 AT4G38380 MATE efflux family protein -0.58 0.33 -0.31
32 AT1G18660 zinc finger (C3HC4-type RING finger) family protein -0.58 0.31 -0.29
33 AT2G41700 ATP-binding cassette A1 ATP-binding cassette A1,
Arabidopsis thaliana ATP-binding
cassette A1		 0.58 0.3 -0.31
34 AT5G61520 Major facilitator superfamily protein 0.58 0.3 -0.3
35 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 -0.58 0.3 -0.33
36 AT2G26830 Protein kinase superfamily protein embryo defective 1187 -0.58 0.32 -0.31
37 AT2G27170 Structural maintenance of chromosomes (SMC) family protein STRUCTURAL MAINTENANCE OF
CHROMOSOMES 3, TITAN7		 -0.57 0.32 -0.31
38 AT4G02720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 25
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.57 0.3 -0.32
39 AT3G53210 nodulin MtN21 /EamA-like transporter family protein 0.57 0.31 -0.32
40 AT5G25450 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0.57 0.28 -0.31
41 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 0.57 0.32 -0.32
42 AT1G10640 Pectin lyase-like superfamily protein -0.56 0.32 -0.32
43 AT3G06010 Homeotic gene regulator ATCHR12 -0.56 0.32 -0.33
44 AT1G73650 Protein of unknown function (DUF1295) -0.56 0.33 -0.29
45 AT3G62190 Chaperone DnaJ-domain superfamily protein -0.56 0.31 -0.32
46 AT5G10490 MSCS-like 2 MSCS-like 2 -0.56 0.29 -0.31
47 AT3G09360 Cyclin/Brf1-like TBP-binding protein -0.56 0.31 -0.32
48 AT3G14800 transposable element gene -0.56 0.31 -0.32
49 AT5G42830 HXXXD-type acyl-transferase family protein 0.55 0.29 -0.31
50 AT5G58940 calmodulin-binding receptor-like cytoplasmic kinase 1 calmodulin-binding receptor-like
cytoplasmic kinase 1		 0.55 0.31 -0.31
51 AT2G29740 UDP-glucosyl transferase 71C2 UDP-glucosyl transferase 71C2 0.55 0.3 -0.31
52 AT4G36530 alpha/beta-Hydrolases superfamily protein -0.55 0.3 -0.32
53 AT1G73670 MAP kinase 15 MAP kinase 15, MAP kinase 15 -0.55 0.3 -0.32
54 AT1G31870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol, nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2050,
pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303
Blast hits to 9618 proteins in 489 species: Archae - 8;
Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942;
Viruses - 128; Other Eukaryotes - 2334 (source: NCBI
BLink).		 -0.55 0.32 -0.33
55 AT4G10890 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2439 (InterPro:IPR018838); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.55 0.32 -0.32
56 AT1G53400 Ubiquitin domain-containing protein -0.55 0.29 -0.34
57 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 -0.55 0.3 -0.32
58 AT1G27360 squamosa promoter-like 11 squamosa promoter-like 11 -0.54 0.31 -0.33
59 AT5G25840 Protein of unknown function (DUF1677) -0.53 0.34 -0.31
60 AT3G06670 binding -0.53 0.32 -0.32
61 AT3G05120 alpha/beta-Hydrolases superfamily protein GA INSENSITIVE DWARF1A, GA
INSENSITIVE DWARF1A		 0.53 0.31 -0.3
62 AT2G31380 salt tolerance homologue salt tolerance homologue -0.53 0.32 -0.32
63 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.53 0.32 -0.31
64 AT3G20070 titan9 TITAN9 -0.53 0.31 -0.31
65 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 -0.52 0.3 -0.31
66 AT4G08890 transposable element gene 0.52 0.29 -0.31
67 AT3G03440 ARM repeat superfamily protein -0.52 0.34 -0.33
68 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 -0.52 0.3 -0.33
69 AT4G23410 tetraspanin5 tetraspanin5 0.52 0.31 -0.32
70 AT5G25900 GA requiring 3 ARABIDOPSIS THALIANA ENT-KAURENE
OXIDASE 1, CYTOCHROME P450 701 A3,
GA requiring 3		 0.52 0.34 -0.33
71 AT2G43235 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 41 Blast hits to 41 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.52 0.29 -0.31
72 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4		 0.52 0.3 -0.31
73 AT3G03880 Protein of unknown function (DUF1639) -0.52 0.32 -0.3
74 AT5G03415 Transcription factor DP ATDPB, DPB -0.51 0.32 -0.31
75 AT1G03330 Small nuclear ribonucleoprotein family protein -0.51 0.31 -0.33
76 AT1G52510 alpha/beta-Hydrolases superfamily protein -0.51 0.32 -0.32
77 AT3G15410 Leucine-rich repeat (LRR) family protein -0.51 0.33 -0.32
78 AT4G39170 Sec14p-like phosphatidylinositol transfer family protein -0.51 0.31 -0.32
79 AT5G14720 Protein kinase superfamily protein -0.51 0.3 -0.32
80 AT4G21060 Galactosyltransferase family protein -0.51 0.31 -0.29
81 AT2G28880 para-aminobenzoate (PABA) synthase family protein aminodeoxychorismate synthase,
embryo defective 1997		 -0.5 0.3 -0.32
82 AT3G54660 glutathione reductase ATGR2, EMB2360, glutathione
reductase		 -0.5 0.32 -0.32
83 AT2G04060 glycosyl hydrolase family 35 protein 0.5 0.32 -0.32
84 AT4G22400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits
to 44 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.33 -0.31
85 AT5G08450 CONTAINS InterPro DOMAIN/s: Histone deacetylation protein
Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801
proteins in 1175 species: Archae - 64; Bacteria - 2390;
Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses -
208; Other Eukaryotes - 10599 (source: NCBI BLink).		 -0.5 0.3 -0.32
86 AT1G10870 ARF-GAP domain 4 ARF-GAP domain 4 -0.49 0.3 -0.32
87 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.49 0.32 -0.32
88 AT5G15920 structural maintenance of chromosomes 5 EMBRYO DEFECTIVE 2782, structural
maintenance of chromosomes 5		 -0.49 0.34 -0.31
89 AT1G13750 Purple acid phosphatases superfamily protein 0.49 0.32 -0.32
90 AT3G10390 Flavin containing amine oxidoreductase family protein FLOWERING LOCUS D -0.49 0.32 -0.33
91 AT2G22720 SPT2 chromatin protein -0.48 0.31 -0.34
92 AT2G42270 U5 small nuclear ribonucleoprotein helicase -0.48 0.32 -0.28
93 AT1G20670 DNA-binding bromodomain-containing protein -0.48 0.32 -0.3
94 AT3G54500 BEST Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183
Blast hits to 175 proteins in 44 species: Archae - 0;
Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).		 -0.48 0.33 -0.33
95 AT3G55520 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.48 0.3 -0.3
96 AT3G18360 VQ motif-containing protein 0.48 0.31 -0.33
97 AT1G72050 transcription factor IIIA transcription factor IIIA -0.48 0.32 -0.32
98 AT5G58890 AGAMOUS-like 82 AGAMOUS-like 82 -0.48 0.32 -0.32
99 AT3G21650 Protein phosphatase 2A regulatory B subunit family protein -0.48 0.31 -0.31
100 AT1G54610 Protein kinase superfamily protein -0.48 0.31 -0.3
101 AT5G20340 beta-1,3-glucanase 5 beta-1,3-glucanase 5 0.47 0.32 -0.33
102 AT2G19960 hAT family dimerisation domain 0.46 0.31 -0.3
103 AT4G27160 seed storage albumin 3 AT2S3, seed storage albumin 3 0.46 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0164 MST_1596.8 - - - 0.69 0.42 -0.46
105 C0187 Neoeriocitrin - - - 0.64 0.44 -0.47