AT5G42970 : ATS4
Query Information
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AGICode AT5G42970
Description Proteasome component (PCI) domain protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G42970 Proteasome component (PCI) domain protein ATS4, CONSTITUTIVE
PHOTOMORPHOGENIC 14, CONSTITUTIVE
PHOTOMORPHOGENIC 8, COP9
SIGNALOSOME SUBUNIT 4, EMBRYO
DEFECTIVE 134, FUSCA 4, FUSCA 8		 1 0.31 -0.33
2 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.84 0.31 -0.3
3 AT1G14810 semialdehyde dehydrogenase family protein 0.8 0.29 -0.3
4 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.78 0.32 -0.32
5 AT1G17550 homology to ABI2 homology to ABI2 -0.77 0.33 -0.32
6 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.75 0.31 -0.28
7 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.75 0.33 -0.29
8 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.74 0.32 -0.32
9 AT3G05640 Protein phosphatase 2C family protein -0.73 0.3 -0.31
10 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.73 0.34 -0.32
11 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.73 0.31 -0.32
12 AT3G43590 zinc knuckle (CCHC-type) family protein 0.72 0.32 -0.34
13 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 -0.72 0.29 -0.32
14 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.72 0.34 -0.33
15 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.71 0.33 -0.3
16 AT2G27775 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
Tetratricopeptide repeat (TPR)-like superfamily protein
(TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.33
17 AT1G68020 UDP-Glycosyltransferase / trehalose-phosphatase family
protein		 ATTPS6, TREHALOSE -6-PHOSPHATASE
SYNTHASE S6		 -0.7 0.32 -0.32
18 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.32
19 AT3G20430 CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA
export protein, RNA-binding domain (InterPro:IPR019385);
Has 110 Blast hits to 110 proteins in 51 species: Archae -
0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).		 0.7 0.29 -0.32
20 AT1G19430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.29 -0.32
21 AT1G29680 Protein of unknown function (DUF1264) -0.7 0.32 -0.35
22 AT5G12980 Cell differentiation, Rcd1-like protein 0.7 0.3 -0.3
23 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein 0.69 0.31 -0.3
24 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.69 0.32 -0.32
25 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.69 0.33 -0.29
26 AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.32 -0.32
27 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.69 0.3 -0.33
28 AT4G22910 FIZZY-related 2 cell cycle switch protein 52 A1,
FIZZY-related 2		 0.69 0.3 -0.33
29 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.33
30 AT1G79200 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.69 0.32 -0.32
31 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.69 0.34 -0.3
32 AT3G58180 ARM repeat superfamily protein 0.69 0.32 -0.33
33 AT1G56600 galactinol synthase 2 galactinol synthase 2, galactinol
synthase 2		 -0.68 0.33 -0.32
34 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 DUO1-activated ATPase 1 -0.68 0.32 -0.32
35 AT1G69260 ABI five binding protein ABI five binding protein -0.68 0.32 -0.33
36 AT5G47940 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.68 0.3 -0.31
37 AT2G21590 Glucose-1-phosphate adenylyltransferase family protein APL4 -0.68 0.31 -0.3
38 AT1G56350 Peptide chain release factor 2 0.68 0.31 -0.29
39 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 0.67 0.32 -0.32
40 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 -0.67 0.33 -0.31
41 AT2G12400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in
23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi -
0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.67 0.3 -0.32
42 AT3G43040 transposable element gene -0.67 0.32 -0.32
43 AT5G51210 oleosin3 oleosin3 -0.67 0.31 -0.33
44 AT1G31750 proline-rich family protein -0.66 0.32 -0.32
45 AT3G22380 time for coffee TIME FOR COFFEE -0.66 0.31 -0.33
46 AT3G54390 sequence-specific DNA binding transcription factors -0.65 0.31 -0.3
47 AT4G21440 MYB-like 102 A. THALIANA MYB 4, MYB-like 102,
MYB102, MYB-like 102		 -0.65 0.3 -0.31
48 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 -0.65 0.33 -0.31
49 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 -0.64 0.32 -0.32
50 AT1G65920 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.64 0.3 -0.3
51 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.63 0.31 -0.31
52 AT5G13170 senescence-associated gene 29 AtSWEET15, senescence-associated
gene 29, SWEET15		 -0.62 0.33 -0.32
53 AT3G48710 DEK domain-containing chromatin associated protein -0.62 0.33 -0.32
54 AT1G47340 F-box and associated interaction domains-containing protein -0.62 0.33 -0.31
55 AT5G48150 GRAS family transcription factor phytochrome a signal transduction
1		 -0.62 0.31 -0.31
56 AT3G63060 EID1-like 3 EID1-like 3 -0.62 0.32 -0.31
57 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 -0.62 0.31 -0.32
58 AT2G20350 Integrase-type DNA-binding superfamily protein -0.62 0.31 -0.32
59 AT5G44180 Homeodomain-like transcriptional regulator -0.61 0.3 -0.32
60 AT1G55460 DNA/RNA-binding protein Kin17, conserved region -0.61 0.3 -0.29
61 AT4G35190 Putative lysine decarboxylase family protein LONELY GUY 5 -0.61 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.86 0.46 -0.45 C0123
63 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.82 0.43 -0.43
64 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.65 0.44 -0.42 C0267