AT5G42960 : -
Query Information
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AGICode AT5G42960
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G42960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, plastid, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 1 0.32 -0.29
2 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 0.79 0.34 -0.3
3 AT2G23360 Plant protein of unknown function (DUF869) -0.69 0.31 -0.31
4 AT3G06110 MAPK phosphatase 2 ARABIDOPSIS MAPK PHOSPHATASE 2,
DUAL-SPECIFICITY PROTEIN
PHOSPHATASE 1B, MAPK phosphatase 2		 0.69 0.32 -0.32
5 AT2G05810 ARM repeat superfamily protein -0.68 0.32 -0.3
6 AT4G23970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.31 -0.31
7 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 0.67 0.31 -0.31
8 AT3G03860 APR-like 5 APR-like 5, APR-like 5 0.66 0.31 -0.32
9 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1		 0.66 0.29 -0.31
10 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.66 0.32 -0.31
11 AT5G12310 RING/U-box superfamily protein 0.66 0.3 -0.32
12 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0.66 0.31 -0.3
13 AT1G17410 Nucleoside diphosphate kinase family protein 0.65 0.3 -0.32
14 AT4G22770 AT hook motif DNA-binding family protein -0.65 0.32 -0.31
15 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B 0.65 0.31 -0.32
16 AT1G06060 LisH and RanBPM domains containing protein 0.65 0.34 -0.34
17 AT5G47870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 radiation sensitive 51-2, RAD52-2B 0.65 0.3 -0.31
18 AT3G47850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 12 growth stages; Has 57 Blast hits to 57 proteins
in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12;
Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink).		 0.65 0.3 -0.3
19 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein 0.64 0.34 -0.33
20 AT5G48530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G07440.1); Has 32 Blast hits to 32
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.29 -0.32
21 AT5G65710 HAESA-like 2 HAESA-like 2 -0.64 0.29 -0.29
22 AT5G25160 zinc finger protein 3 zinc finger protein 3 -0.64 0.33 -0.32
23 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 0.64 0.33 -0.31
24 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2		 0.64 0.28 -0.3
25 AT2G17300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast
hits to 42 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.31
26 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.29 -0.32
27 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.64 0.33 -0.33
28 AT1G55700 Cysteine/Histidine-rich C1 domain family protein -0.63 0.31 -0.32
29 AT1G78720 SecY protein transport family protein -0.63 0.31 -0.31
30 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.33 -0.33
31 AT5G47420 Tryptophan RNA-binding attenuator protein-like 0.63 0.31 -0.34
32 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.62 0.35 -0.34
33 AT4G01440 nodulin MtN21 /EamA-like transporter family protein -0.62 0.3 -0.3
34 AT2G31990 Exostosin family protein -0.62 0.29 -0.31
35 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.29
36 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 -0.61 0.32 -0.34
37 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 -0.61 0.34 -0.3
38 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 -0.61 0.3 -0.31
39 AT2G47160 HCO3- transporter family AtBOR1, REQUIRES HIGH BORON 1 -0.61 0.3 -0.33
40 AT2G44530 Phosphoribosyltransferase family protein 0.6 0.33 -0.34
41 AT1G04100 indoleacetic acid-induced protein 10 indoleacetic acid-induced protein
10		 -0.6 0.32 -0.32
42 AT1G79330 metacaspase 5 AMC6, metacaspase 5, metacaspase
2b, metacaspase 5, metacaspase 2b		 -0.6 0.29 -0.28
43 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.3
44 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.59 0.33 -0.33
45 AT4G18720 Transcription factor IIS protein 0.59 0.33 -0.32
46 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 0.59 0.33 -0.34
47 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.32
48 AT3G03880 Protein of unknown function (DUF1639) 0.59 0.34 -0.31
49 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 -0.59 0.32 -0.31
50 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.58 0.31 -0.32
51 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.3 -0.32
52 AT4G16830 Hyaluronan / mRNA binding family 0.58 0.33 -0.32
53 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 0.58 0.35 -0.33
54 AT3G20070 titan9 TITAN9 0.58 0.34 -0.3
55 AT5G19700 MATE efflux family protein -0.57 0.33 -0.32
56 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 -0.57 0.32 -0.31
57 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 0.57 0.33 -0.31
58 AT1G27550 F-box family protein 0.57 0.3 -0.33
59 AT1G12630 Integrase-type DNA-binding superfamily protein -0.57 0.31 -0.29
60 AT1G68270 AMP-dependent synthetase and ligase family protein -0.56 0.31 -0.33
61 AT4G14385 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Histone H4
acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.56 0.33 -0.3
62 AT3G18770 Autophagy-related protein 13 -0.56 0.31 -0.29
63 AT5G11050 myb domain protein 64 myb domain protein 64, myb domain
protein 64		 -0.56 0.32 -0.32
64 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.31 -0.32
65 AT5G20340 beta-1,3-glucanase 5 beta-1,3-glucanase 5 -0.56 0.33 -0.32
66 AT2G15130 Plant basic secretory protein (BSP) family protein -0.56 0.32 -0.31
67 AT5G37520 Protein of Unknown Function (DUF239) 0.56 0.33 -0.34
68 AT4G10280 RmlC-like cupins superfamily protein 0.56 0.31 -0.31
69 AT3G59130 Cysteine/Histidine-rich C1 domain family protein 0.56 0.32 -0.32
70 AT2G41570 transposable element gene 0.56 0.31 -0.31
71 AT4G34330 Protein of unknown function (DUF677) -0.55 0.31 -0.33
72 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 -0.55 0.33 -0.35
73 AT1G17330 Metal-dependent phosphohydrolase 0.55 0.29 -0.31
74 AT1G67760 TCP-1/cpn60 chaperonin family protein -0.55 0.31 -0.3
75 AT5G57830 Protein of unknown function, DUF593 0.54 0.31 -0.33
76 AT3G48960 Ribosomal protein L13e family protein -0.54 0.3 -0.33
77 AT5G09500 Ribosomal protein S19 family protein -0.54 0.32 -0.33
78 AT1G56010 NAC domain containing protein 1 Arabidopsis NAC domain containing
protein 21, Arabidopsis NAC domain
containing protein 22, NAC domain
containing protein 1		 -0.54 0.33 -0.31
79 AT1G12720 transposable element gene -0.54 0.32 -0.32
80 AT5G39785 Protein of unknown function (DUF1666) -0.53 0.33 -0.33
81 AT1G49930 BEST Arabidopsis thaliana protein match is: Alanyl-tRNA
synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits
to 21 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.31 -0.32
82 AT5G66620 DA1-related protein 6 DA1-related protein 6 -0.53 0.31 -0.33
83 AT1G14550 Peroxidase superfamily protein -0.53 0.32 -0.32
84 AT4G10690 transposable element gene -0.53 0.32 -0.34
85 AT2G06890 transposable element gene -0.53 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.68 0.42 -0.45 C0035