AT5G42540 : EXORIBONUCLEASE 2
Query Information
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AGICode AT5G42540
Description exoribonuclease 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 1 0.32 -0.31
2 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.87 0.32 -0.32
3 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.85 0.32 -0.32
4 AT3G06530 ARM repeat superfamily protein 0.83 0.31 -0.3
5 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.83 0.32 -0.31
6 AT1G79150 binding 0.82 0.31 -0.3
7 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.82 0.31 -0.34
8 AT4G25730 FtsJ-like methyltransferase family protein 0.81 0.31 -0.35
9 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.81 0.32 -0.34
10 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.81 0.32 -0.31
11 AT3G24080 KRR1 family protein 0.8 0.32 -0.31
12 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.8 0.31 -0.34
13 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 0.79 0.3 -0.31
14 AT4G30990 ARM repeat superfamily protein 0.79 0.32 -0.33
15 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 0.78 0.31 -0.32
16 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.78 0.32 -0.29
17 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.78 0.33 -0.3
18 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 0.78 0.29 -0.31
19 AT3G11964 RNA binding;RNA binding 0.78 0.3 -0.32
20 AT3G56990 embryo sac development arrest 7 embryo sac development arrest 7 0.77 0.31 -0.32
21 AT4G12750 Homeodomain-like transcriptional regulator 0.77 0.32 -0.32
22 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.77 0.32 -0.33
23 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.77 0.32 -0.32
24 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.77 0.32 -0.33
25 AT5G59980 Polymerase/histidinol phosphatase-like 0.77 0.32 -0.3
26 AT3G21540 transducin family protein / WD-40 repeat family protein 0.77 0.29 -0.32
27 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.77 0.33 -0.32
28 AT3G07660 Kinase-related protein of unknown function (DUF1296) 0.76 0.33 -0.31
29 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.76 0.33 -0.31
30 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.76 0.33 -0.33
31 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.76 0.31 -0.32
32 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.3 -0.31
33 AT5G17270 Protein prenylyltransferase superfamily protein 0.75 0.31 -0.3
34 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.75 0.31 -0.31
35 AT2G03670 cell division cycle 48B cell division cycle 48B 0.74 0.32 -0.3
36 AT1G04945 HIT-type Zinc finger family protein 0.74 0.3 -0.31
37 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.74 0.32 -0.31
38 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.32
39 AT5G15700 DNA/RNA polymerases superfamily protein 0.73 0.31 -0.32
40 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.73 0.31 -0.33
41 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.72 0.33 -0.33
42 AT3G66652 fip1 motif-containing protein 0.72 0.31 -0.31
43 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.72 0.32 -0.31
44 AT4G27010 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G72270.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 EMBRYO DEFECTIVE 2788 0.72 0.32 -0.32
45 AT1G19000 Homeodomain-like superfamily protein -0.71 0.3 -0.31
46 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.71 0.31 -0.33
47 AT1G64600 methyltransferases;copper ion binding 0.71 0.31 -0.32
48 AT1G03830 guanylate-binding family protein 0.71 0.34 -0.34
49 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.32 -0.3
50 AT5G48120 ARM repeat superfamily protein 0.71 0.31 -0.32
51 AT5G06460 ubiquitin activating enzyme 2 ARABIDOPSIS THALIANA UBIQUITIN
ACTIVATING ENZYME 2, ubiquitin
activating enzyme 2		 0.7 0.33 -0.33
52 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.7 0.32 -0.33
53 AT1G67120 ATPases;nucleotide binding;ATP
binding;nucleoside-triphosphatases;transcription factor
binding		 0.7 0.31 -0.3
54 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.7 0.3 -0.32
55 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.33 -0.33
56 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.7 0.31 -0.32
57 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.69 0.33 -0.3
58 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.69 0.32 -0.32
59 AT1G72560 ARM repeat superfamily protein PAUSED 0.69 0.33 -0.31
60 AT5G40480 embryo defective 3012 embryo defective 3012 0.69 0.33 -0.33
61 AT2G27100 C2H2 zinc-finger protein SERRATE (SE) SERRATE 0.69 0.31 -0.31
62 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.67 0.33 -0.31
63 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A		 -0.66 0.32 -0.3
64 AT4G20820 FAD-binding Berberine family protein -0.66 0.31 -0.31
65 AT4G01900 GLNB1 homolog GLNB1 homolog, PII -0.66 0.32 -0.33
66 AT3G54390 sequence-specific DNA binding transcription factors -0.65 0.32 -0.32
67 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.64 0.33 -0.33
68 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.33
69 AT1G12550 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 hydroxypyruvate reductase 3 -0.64 0.33 -0.33
70 AT4G13950 ralf-like 31 ralf-like 31 -0.64 0.32 -0.31
71 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.63 0.31 -0.29
72 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.63 0.34 -0.3
73 AT4G07740 Protein of unknown function (DUF3287) -0.63 0.31 -0.3
74 AT3G14220 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.32 -0.32
75 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.63 0.32 -0.33
76 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.62 0.31 -0.3
77 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.3
78 AT4G31330 Protein of unknown function, DUF599 -0.62 0.31 -0.29
79 AT5G48930 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl
transferase		 hydroxycinnamoyl-CoA
shikimate/quinate hydroxycinnamoyl
transferase		 -0.62 0.31 -0.34
80 AT2G23780 RING/U-box superfamily protein -0.62 0.32 -0.32
81 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 -0.62 0.32 -0.3
82 AT3G09250 Nuclear transport factor 2 (NTF2) family protein -0.62 0.3 -0.35
83 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.61 0.32 -0.33
84 AT5G07580 Integrase-type DNA-binding superfamily protein -0.61 0.31 -0.3
85 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).		 -0.61 0.3 -0.32
86 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.31
87 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.61 0.3 -0.31
88 AT1G68260 Thioesterase superfamily protein -0.61 0.32 -0.29
89 AT2G45960 plasma membrane intrinsic protein 1B ATHH2, NAMED PLASMA MEMBRANE
INTRINSIC PROTEIN 1;2, plasma
membrane intrinsic protein 1B,
TRANSMEMBRANE PROTEIN A		 -0.6 0.33 -0.32
90 AT1G69630 F-box/RNI-like superfamily protein -0.6 0.31 -0.32
91 AT1G10150 Carbohydrate-binding protein -0.6 0.31 -0.32
92 AT5G67150 HXXXD-type acyl-transferase family protein -0.59 0.32 -0.33
93 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 -0.59 0.31 -0.31
94 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.31 -0.31
95 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.59 0.33 -0.33
96 AT5G03170 FASCICLIN-like arabinogalactan-protein 11 ARABIDOPSIS FASCICLIN-LIKE
ARABINOGALACTAN-PROTEIN 11,
FASCICLIN-like
arabinogalactan-protein 11		 -0.59 0.31 -0.32
97 AT1G53060 Legume lectin family protein -0.59 0.3 -0.33
98 AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein UBA1A -0.59 0.3 -0.32
99 AT1G69800 Cystathionine beta-synthase (CBS) protein -0.58 0.32 -0.32
100 AT5G44060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.31 -0.33
101 AT5G24540 beta glucosidase 31 beta glucosidase 31 -0.58 0.3 -0.31
102 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.57 0.28 -0.34
103 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 -0.57 0.32 -0.33
104 AT3G57320 unknown protein; Has 30 Blast hits to 30 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.31 -0.32
105 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 -0.57 0.32 -0.33
106 AT3G61540 alpha/beta-Hydrolases superfamily protein -0.56 0.32 -0.29
107 AT3G12040 DNA-3-methyladenine glycosylase (MAG) -0.56 0.3 -0.3
108 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.56 0.29 -0.3
109 AT3G55530 RING/U-box superfamily protein SALT- AND DROUGHT-INDUCED RING
FINGER1		 -0.56 0.32 -0.3
110 AT1G09440 Protein kinase superfamily protein -0.56 0.31 -0.32