AT5G42640 : -
Query Information
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AGICode AT5G42640
Description C2H2 and C2HC zinc fingers superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein 1 0.33 -0.32
2 AT3G29690 HXXXD-type acyl-transferase family protein 0.71 0.31 -0.33
3 AT1G59790 Cullin family protein -0.71 0.3 -0.32
4 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS -0.67 0.32 -0.31
5 AT1G35380 transposable element gene 0.67 0.3 -0.33
6 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.33 -0.32
7 AT5G46310 WRKY family transcription factor -0.66 0.32 -0.3
8 AT2G13230 transposable element gene 0.66 0.32 -0.32
9 AT1G43886 transposable element gene 0.65 0.32 -0.31
10 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.65 0.31 -0.31
11 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 -0.64 0.3 -0.31
12 AT2G06390 transposable element gene -0.64 0.29 -0.32
13 AT2G06120 transposable element gene -0.64 0.28 -0.33
14 AT4G04100 transposable element gene 0.64 0.33 -0.32
15 AT5G57320 villin, putative villin 5 -0.64 0.33 -0.31
16 AT1G63960 Copper transport protein family -0.64 0.32 -0.34
17 AT1G30350 Pectin lyase-like superfamily protein -0.64 0.33 -0.3
18 AT4G13020 Protein kinase superfamily protein MHK -0.63 0.31 -0.3
19 AT1G74620 RING/U-box superfamily protein -0.62 0.32 -0.35
20 AT2G12880 Zinc knuckle (CCHC-type) family protein 0.62 0.33 -0.32
21 AT5G37640 ubiquitin 9 ubiquitin 9 0.62 0.32 -0.3
22 AT5G38670 Galactose oxidase/kelch repeat superfamily protein 0.62 0.33 -0.31
23 AT1G08080 alpha carbonic anhydrase 7 alpha carbonic anhydrase 7, A.
THALIANA ALPHA CARBONIC ANHYDRASE
7		 -0.62 0.31 -0.3
24 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.31
25 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.3 -0.31
26 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.62 0.32 -0.31
27 AT3G49950 GRAS family transcription factor -0.62 0.31 -0.29
28 AT5G39420 CDC2C CDC2C 0.62 0.34 -0.29
29 AT1G61750 Receptor-like protein kinase-related family protein 0.61 0.3 -0.29
30 AT5G03250 Phototropic-responsive NPH3 family protein -0.61 0.3 -0.32
31 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein 0.61 0.34 -0.31
32 AT4G08650 transposable element gene -0.61 0.31 -0.31
33 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein 0.61 0.31 -0.31
34 AT4G14810 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.33 -0.31
35 AT1G35820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30520.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.33 -0.34
36 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.3 -0.32
37 AT2G33460 ROP-interactive CRIB motif-containing protein 1 ROP-interactive CRIB
motif-containing protein 1		 -0.6 0.32 -0.3
38 AT2G23160 F-box family protein -0.6 0.33 -0.32
39 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 -0.6 0.31 -0.33
40 AT1G03910 EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein,
cactus-binding domain, C-terminal (InterPro:IPR019134),
Cactin, central region (InterPro:IPR018816); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins
in 452 species: Archae - 31; Bacteria - 352; Metazoa -
6006; Fungi - 1138; Plants - 599; Viruses - 33; Other
Eukaryotes - 3552 (source: NCBI BLink).		 -0.59 0.33 -0.32
41 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 0.59 0.31 -0.33
42 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.31 -0.33
43 AT5G43710 Glycosyl hydrolase family 47 protein -0.59 0.32 -0.32
44 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 -0.59 0.32 -0.3
45 AT3G05460 sporozoite surface protein-related 0.59 0.33 -0.32
46 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 -0.59 0.31 -0.33
47 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 0.59 0.32 -0.32
48 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.59 0.31 -0.3
49 AT4G14460 transposable element gene -0.59 0.36 -0.32
50 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.59 0.31 -0.32
51 AT3G29640 transposable element gene 0.59 0.32 -0.32
52 AT1G36095 DNA binding -0.58 0.31 -0.33
53 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 -0.58 0.32 -0.33
54 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 -0.58 0.31 -0.33
55 AT3G08800 ARM repeat superfamily protein SHORT-ROOT interacting embryonic
lethal		 0.58 0.32 -0.31
56 AT5G57200 ENTH/ANTH/VHS superfamily protein -0.58 0.32 -0.33
57 AT3G04200 RmlC-like cupins superfamily protein -0.58 0.31 -0.3
58 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 -0.58 0.31 -0.32
59 AT4G08210 Pentatricopeptide repeat (PPR-like) superfamily protein -0.58 0.33 -0.34
60 AT1G34410 auxin response factor 21 auxin response factor 21 0.58 0.32 -0.31
61 AT5G43230 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.31 -0.32
62 AT5G21150 Argonaute family protein ARGONAUTE 9 -0.57 0.31 -0.32
63 AT2G16450 F-box and associated interaction domains-containing protein 0.57 0.31 -0.3
64 AT5G32470 Haem oxygenase-like, multi-helical -0.57 0.31 -0.32
65 AT3G27930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 35
Blast hits to 35 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.3
66 AT3G43530 transposable element gene 0.57 0.31 -0.32
67 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.57 0.32 -0.32
68 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).		 0.57 0.32 -0.31
69 AT3G30846 transposable element gene 0.57 0.29 -0.33
70 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.56 0.3 -0.32
71 AT3G57100 Protein of unknown function (DUF677) 0.56 0.33 -0.32
72 AT4G25610 C2H2-like zinc finger protein 0.56 0.33 -0.34
73 AT2G29220 Concanavalin A-like lectin protein kinase family protein -0.56 0.3 -0.3
74 AT3G15890 Protein kinase superfamily protein 0.56 0.32 -0.3
75 AT3G42220 transposable element gene -0.56 0.33 -0.31
76 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 -0.56 0.32 -0.29
77 AT1G08065 alpha carbonic anhydrase 5 alpha carbonic anhydrase 5, ALPHA
CARBONIC ANHYDRASE 5		 -0.55 0.32 -0.29
78 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily 0.55 0.32 -0.34
79 AT5G18910 Protein kinase superfamily protein -0.55 0.31 -0.32
80 AT1G05770 Mannose-binding lectin superfamily protein 0.55 0.32 -0.31
81 AT1G35480 transposable element gene 0.55 0.33 -0.31
82 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 0.55 0.32 -0.32
83 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 -0.55 0.31 -0.3
84 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.55 0.34 -0.29
85 AT3G44760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.55 0.31 -0.3
86 AT3G42730 transposable element gene 0.54 0.3 -0.32
87 AT3G47440 tonoplast intrinsic protein 5;1 tonoplast intrinsic protein 5;1 0.54 0.33 -0.31
88 AT3G42900 transposable element gene 0.54 0.31 -0.32
89 AT2G25340 vesicle-associated membrane protein 712 vesicle-associated membrane
protein 712, VAMP712,
vesicle-associated membrane
protein 712		 0.53 0.31 -0.31
90 AT1G05740 Eukaryotic protein of unknown function (DUF842) 0.53 0.32 -0.32
91 AT1G65080 Membrane insertion protein, OxaA/YidC with
tetratricopeptide repeat domain		 0.53 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0115 Homoserine D,L-Homoserine Homoserine homoserine biosynthesis,
threonine biosynthesis from homoserine,
methionine biosynthesis II 		0.57 0.33 -0.3 C0115