AT5G42310 : -
Query Information
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AGICode AT5G42310
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.31 -0.32
2 AT3G51820 UbiA prenyltransferase family protein ATG4, CHLG, G4, PIGMENT DEFECTIVE
325		 0.87 0.31 -0.32
3 AT3G15360 thioredoxin M-type 4 ATHM4, ARABIDOPSIS THIOREDOXIN
M-TYPE 4, thioredoxin M-type 4		 0.87 0.32 -0.31
4 AT1G32550 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1 0.87 0.3 -0.31
5 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.87 0.32 -0.32
6 AT5G13630 magnesium-chelatase subunit chlH, chloroplast, putative /
Mg-protoporphyrin IX chelatase, putative (CHLH)		 ABA-BINDING PROTEIN, CONDITIONAL
CHLORINA, CCH1, H SUBUNIT OF
MG-CHELATASE, GENOMES UNCOUPLED 5		 0.87 0.31 -0.33
7 AT5G54270 light-harvesting chlorophyll B-binding protein 3 light-harvesting chlorophyll
B-binding protein 3, LHCB3*1		 0.87 0.33 -0.33
8 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Uncharacterised
conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 translocon at the inner envelope
membrane of chloroplasts 20-V,
translocon at the inner envelope
membrane of chloroplasts 20-V		 0.85 0.32 -0.33
9 AT5G44190 GOLDEN2-like 2 ATGLK2, GOLDEN2-like 2, GBF'S
PRO-RICH REGION-INTERACTING FACTOR
2		 0.85 0.3 -0.32
10 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 25
Blast hits to 25 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.33 -0.31
11 AT1G19740 ATP-dependent protease La (LON) domain protein 0.85 0.33 -0.31
12 AT3G59400 enzyme binding;tetrapyrrole binding GENOMES UNCOUPLED 4 0.85 0.31 -0.33
13 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.85 0.31 -0.3
14 AT3G07670 Rubisco methyltransferase family protein 0.84 0.31 -0.32
15 AT5G07020 proline-rich family protein 0.84 0.32 -0.32
16 AT1G44446 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ARABIDOPSIS THALIANA CHLOROPHYLL A
OXYGENASE, CHLOROPHYLL A
OXYGENASE, CHLORINA 1		 0.84 0.31 -0.32
17 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.84 0.31 -0.33
18 AT2G45560 cytochrome P450, family 76, subfamily C, polypeptide 1 cytochrome P450, family 76,
subfamily C, polypeptide 1		 0.83 0.3 -0.3
19 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.83 0.32 -0.32
20 AT3G19480 D-3-phosphoglycerate dehydrogenase 0.83 0.29 -0.31
21 AT3G19220 protein disulfide isomerases SHI-YO-U MEANS COTYLEDON IN
JAPANESE, SNOWY COTYLEDON 2		 0.83 0.33 -0.31
22 AT2G36145 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast stroma,
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; Has 49 Blast hits to 49 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.32 -0.32
23 AT1G74730 Protein of unknown function (DUF1118) 0.83 0.29 -0.31
24 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.83 0.33 -0.31
25 AT1G08550 non-photochemical quenching 1 ARABIDOPSIS VIOLAXANTHIN
DE-EPOXIDASE 1, non-photochemical
quenching 1		 0.82 0.33 -0.33
26 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.82 0.3 -0.31
27 AT2G45770 signal recognition particle receptor protein, chloroplast
(FTSY)		 CPFTSY, FERRIC CHELATE REDUCTASE
DEFECTIVE 4		 0.82 0.32 -0.33
28 AT5G57960 GTP-binding protein, HflX 0.82 0.31 -0.31
29 AT1G66430 pfkB-like carbohydrate kinase family protein 0.82 0.3 -0.32
30 AT4G00180 Plant-specific transcription factor YABBY family protein YABBY3 0.81 0.32 -0.32
31 AT2G05620 proton gradient regulation 5 proton gradient regulation 5 0.81 0.3 -0.31
32 AT1G80770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 pigment defective 318 0.81 0.31 -0.32
33 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.81 0.29 -0.31
34 AT2G47240 AMP-dependent synthetase and ligase family protein ECERIFERUM 8, LONG-CHAIN ACYL-COA
SYNTHASE 1		 0.81 0.31 -0.32
35 AT5G09980 elicitor peptide 4 precursor elicitor peptide 4 precursor -0.81 0.32 -0.33
36 AT5G63040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G48460.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.33 -0.3
37 AT2G13440 glucose-inhibited division family A protein 0.81 0.32 -0.33
38 AT5G24290 Vacuolar iron transporter (VIT) family protein -0.8 0.3 -0.3
39 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.8 0.34 -0.31
40 AT5G10820 Major facilitator superfamily protein -0.79 0.32 -0.3
41 AT2G48010 receptor-like kinase in in flowers 3 receptor-like kinase in in flowers
3		 -0.79 0.3 -0.33
42 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.79 0.32 -0.32
43 AT5G50760 SAUR-like auxin-responsive protein family -0.79 0.31 -0.31
44 AT1G05620 uridine-ribohydrolase 2 nucleoside hydrolase 2,
uridine-ribohydrolase 2		 -0.77 0.3 -0.31
45 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2		 -0.76 0.29 -0.31
46 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 -0.76 0.31 -0.33
47 AT1G11580 methylesterase PCR A ATPMEPCRA, methylesterase PCR A -0.76 0.33 -0.35
48 AT1G61820 beta glucosidase 46 beta glucosidase 46 -0.74 0.33 -0.3
49 AT1G06620 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.74 0.31 -0.33
50 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.32 -0.32
51 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 -0.74 0.33 -0.31
52 AT4G29690 Alkaline-phosphatase-like family protein -0.74 0.3 -0.3
53 AT4G27860 vacuolar iron transporter (VIT) family protein -0.73 0.32 -0.32
54 AT5G60300 Concanavalin A-like lectin protein kinase family protein lectin receptor kinase I.9 -0.73 0.3 -0.31
55 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.73 0.33 -0.32
56 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.73 0.31 -0.3
57 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.33 -0.31
58 AT5G35940 Mannose-binding lectin superfamily protein -0.73 0.3 -0.33
59 AT2G43610 Chitinase family protein -0.73 0.3 -0.33
60 AT4G15340 pentacyclic triterpene synthase 1 04C11, pentacyclic triterpene
synthase 1, pentacyclic triterpene
synthase 1		 -0.72 0.32 -0.32
61 AT3G58710 WRKY DNA-binding protein 69 RABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 69, WRKY
DNA-binding protein 69		 -0.72 0.31 -0.31
62 AT2G37750 unknown protein; Has 21 Blast hits to 21 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.31 -0.33
63 AT4G33560 Wound-responsive family protein -0.71 0.31 -0.32
64 AT5G59560 sensitivity to red light reduced protein (SRR1) SENSITIVITY TO RED LIGHT REDUCED 1 -0.71 0.3 -0.3
65 AT1G23850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits
to 40 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.29 -0.31
66 AT5G26600 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.7 0.29 -0.34
67 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.34 -0.32
68 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.7 0.31 -0.33
69 AT5G25770 alpha/beta-Hydrolases superfamily protein -0.7 0.33 -0.32
70 AT1G72790 hydroxyproline-rich glycoprotein family protein -0.7 0.31 -0.33
71 AT5G59090 subtilase 4.12 subtilase 4.12, subtilase 4.12 -0.69 0.31 -0.32
72 AT1G09460 Carbohydrate-binding X8 domain superfamily protein -0.69 0.3 -0.3
73 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.32
74 AT2G04940 scramblase-related -0.69 0.3 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.8 0.42 -0.42 C0120