AT5G41960 : -
Query Information
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AGICode AT5G41960
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G41960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 1 0.31 -0.33
2 AT5G16990 Zinc-binding dehydrogenase family protein 0.79 0.3 -0.32
3 AT3G52880 monodehydroascorbate reductase 1 monodehydroascorbate reductase 1,
monodehydroascorbate reductase 1		 0.75 0.32 -0.3
4 AT5G02790 Glutathione S-transferase family protein Glutathione transferase L3 0.74 0.29 -0.32
5 AT3G11830 TCP-1/cpn60 chaperonin family protein -0.73 0.32 -0.29
6 AT5G36140 cytochrome P450, family 716, subfamily A, polypeptide 2 cytochrome P450, family 716,
subfamily A, polypeptide 2		 -0.72 0.3 -0.32
7 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein 0.72 0.3 -0.32
8 AT2G37240 Thioredoxin superfamily protein 0.71 0.31 -0.3
9 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.7 0.3 -0.34
10 AT2G28450 zinc finger (CCCH-type) family protein -0.7 0.33 -0.3
11 AT4G13200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 97 Blast hits to 97 proteins
in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 0.7 0.31 -0.31
12 AT1G77690 like AUX1 3 like AUX1 3 -0.69 0.31 -0.31
13 AT5G04260 WCRKC thioredoxin 2 WCRKC thioredoxin 2 0.69 0.29 -0.3
14 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 -0.69 0.3 -0.31
15 AT2G32520 alpha/beta-Hydrolases superfamily protein 0.68 0.29 -0.29
16 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A -0.68 0.34 -0.35
17 AT1G79160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits
to 102 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.32 -0.32
18 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein 0.68 0.32 -0.32
19 AT1G73040 Mannose-binding lectin superfamily protein 0.68 0.3 -0.3
20 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.68 0.32 -0.32
21 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.32 -0.33
22 AT5G64950 Mitochondrial transcription termination factor family
protein		 -0.67 0.32 -0.3
23 AT1G73160 UDP-Glycosyltransferase superfamily protein -0.67 0.34 -0.31
24 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 -0.67 0.31 -0.33
25 AT1G04710 peroxisomal 3-ketoacyl-CoA thiolase 4 3-KETO-ACYL-COA THIOLASE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 4		 0.67 0.33 -0.31
26 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 -0.67 0.32 -0.31
27 AT1G63050 MBOAT (membrane bound O-acyl transferase) family protein -0.66 0.32 -0.31
28 AT1G74770 zinc ion binding -0.66 0.33 -0.33
29 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.66 0.29 -0.32
30 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 0.66 0.31 -0.32
31 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 0.65 0.31 -0.3
32 AT2G19310 HSP20-like chaperones superfamily protein 0.65 0.33 -0.31
33 AT3G44280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.31 -0.33
34 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 -0.65 0.32 -0.31
35 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 -0.65 0.32 -0.3
36 AT5G42420 Nucleotide-sugar transporter family protein -0.65 0.31 -0.31
37 AT2G14110 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.65 0.33 -0.31
38 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.64 0.3 -0.33
39 AT5G04970 Plant invertase/pectin methylesterase inhibitor superfamily -0.64 0.32 -0.31
40 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 0.64 0.32 -0.32
41 AT2G41500 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related		 EMB2776, LACHESIS -0.64 0.29 -0.31
42 AT1G21770 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.64 0.32 -0.31
43 AT5G19640 Major facilitator superfamily protein 0.63 0.31 -0.32
44 AT3G49190 O-acyltransferase (WSD1-like) family protein -0.63 0.3 -0.3
45 AT5G23330 Nucleotidylyl transferase superfamily protein 0.63 0.32 -0.31
46 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.3 -0.31
47 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.62 0.31 -0.32
48 AT2G01950 BRI1-like 2 BRI1-like 2, VASCULAR HIGHWAY 1 -0.62 0.32 -0.31
49 AT3G06460 GNS1/SUR4 membrane protein family -0.62 0.3 -0.31
50 AT4G25320 AT hook motif DNA-binding family protein -0.62 0.31 -0.33
51 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.29
52 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.61 0.33 -0.32
53 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 -0.61 0.33 -0.32
54 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-4 0.61 0.31 -0.31
55 AT5G12970 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 -0.61 0.32 -0.32
56 AT3G13000 Protein of unknown function, DUF547 -0.61 0.3 -0.34
57 AT2G42240 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.3 -0.33
58 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 0.61 0.34 -0.33
59 AT3G45190 SIT4 phosphatase-associated family protein -0.6 0.33 -0.31
60 AT5G09900 26S proteasome regulatory subunit, putative (RPN5) EMBRYO DEFECTIVE 2107, MARIPOSA,
REGULATORY PARTICLE NON-ATPASE
SUBUNIT 5A		 -0.6 0.32 -0.3
61 AT2G42810 protein phosphatase 5.2 Arabidopsis thaliana protein
phosphatase 5, PAPP5, PROTEIN
PHOSPHATASE 5, protein phosphatase
5.2		 -0.6 0.34 -0.32
62 AT4G20390 Uncharacterised protein family (UPF0497) -0.6 0.29 -0.32
63 AT5G43040 Cysteine/Histidine-rich C1 domain family protein -0.6 0.32 -0.32
64 AT5G36150 putative pentacyclic triterpene synthase 3 putative pentacyclic triterpene
synthase 3, putative pentacyclic
triterpene synthase 3		 -0.6 0.31 -0.33
65 AT1G23160 Auxin-responsive GH3 family protein -0.6 0.33 -0.32
66 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.6 0.34 -0.31
67 AT3G28840 Protein of unknown function (DUF1216) 0.6 0.32 -0.33
68 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.6 0.33 -0.31
69 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.59 0.31 -0.33
70 AT4G26320 arabinogalactan protein 13 arabinogalactan protein 13 -0.59 0.29 -0.3
71 AT5G55640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.32 -0.33
72 AT5G61050 histone deacetylase-related / HD-related 0.58 0.31 -0.32
73 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.3 -0.31
74 AT1G74460 GDSL-like Lipase/Acylhydrolase superfamily protein -0.58 0.3 -0.32
75 AT5G56070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.32 -0.31
76 AT4G30760 Putative endonuclease or glycosyl hydrolase 0.58 0.33 -0.31
77 AT5G57770 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.57 0.31 -0.32
78 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 0.57 0.34 -0.34
79 AT1G64920 UDP-Glycosyltransferase superfamily protein -0.57 0.31 -0.33
80 AT4G05470 RNI-like superfamily protein 0.57 0.32 -0.31
81 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.57 0.33 -0.3
82 AT3G14940 phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase 3,
phosphoenolpyruvate carboxylase 3		 -0.57 0.3 -0.32
83 AT5G59610 Chaperone DnaJ-domain superfamily protein 0.57 0.33 -0.32
84 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 -0.57 0.3 -0.31
85 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein -0.57 0.31 -0.31
86 AT5G14020 Endosomal targeting BRO1-like domain-containing protein -0.57 0.31 -0.31
87 AT1G02190 Fatty acid hydroxylase superfamily 0.56 0.32 -0.32
88 AT3G59390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2054
(InterPro:IPR019352); Has 184 Blast hits to 184 proteins in
72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.56 0.3 -0.33
89 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.56 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
90 C0183 MST_3033.1 - - - 0.79 0.43 -0.47
91 C0129 Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - kaempferol glucoside biosynthesis (Arabidopsis) 0.76 0.47 -0.45
92 C0181 MST_2904.3 - - - -0.61 0.45 -0.46