AT5G40920 : -
Query Information
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AGICode AT5G40920
Description pseudogene, disease resistance protein (TIR-NBS-LRR class), putative, domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein.
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 1 0.31 -0.31
2 AT2G47470 thioredoxin family protein ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 11, PDI-LIKE
2-1, MATERNAL EFFECT EMBRYO ARREST
30, PROTEIN DISULFIDE ISOMERASE
11, UNFERTILIZED EMBRYO SAC 5		 -0.75 0.32 -0.32
3 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 -0.75 0.32 -0.3
4 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 -0.75 0.31 -0.31
5 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 -0.75 0.33 -0.29
6 AT4G39570 Galactose oxidase/kelch repeat superfamily protein 0.74 0.3 -0.31
7 AT1G22300 general regulatory factor 10 14-3-3 PROTEIN G-BOX FACTOR14
EPSILON, GF14 EPSILON, general
regulatory factor 10		 -0.74 0.3 -0.32
8 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 -0.74 0.31 -0.3
9 AT5G52240 membrane steroid binding protein 1 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 5, ATMP1, membrane
steroid binding protein 1		 -0.73 0.32 -0.32
10 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 -0.73 0.31 -0.31
11 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 -0.72 0.3 -0.32
12 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 -0.72 0.34 -0.32
13 AT2G27020 20S proteasome alpha subunit G1 20S proteasome alpha subunit G1 -0.71 0.32 -0.3
14 AT1G80870 Protein kinase superfamily protein 0.71 0.33 -0.32
15 AT1G80970 XH domain-containing protein -0.71 0.31 -0.31
16 AT1G66100 Plant thionin -0.7 0.32 -0.33
17 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 -0.7 0.31 -0.32
18 AT4G12530 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.33 -0.32
19 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.31
20 AT1G79340 metacaspase 4 metacaspase 4, metacaspase 2d,
metacaspase 4, metacaspase 2d		 -0.7 0.32 -0.33
21 AT1G69570 Dof-type zinc finger DNA-binding family protein -0.7 0.32 -0.31
22 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 -0.69 0.33 -0.32
23 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.3 -0.31
24 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A -0.69 0.34 -0.32
25 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.69 0.3 -0.32
26 AT4G12590 Protein of unknown function DUF106, transmembrane -0.69 0.31 -0.3
27 AT5G57230 Thioredoxin superfamily protein -0.69 0.31 -0.3
28 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.69 0.31 -0.31
29 AT5G40060 Disease resistance protein (NBS-LRR class) family 0.69 0.33 -0.32
30 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.69 0.33 -0.3
31 AT5G61240 Leucine-rich repeat (LRR) family protein -0.69 0.31 -0.32
32 AT5G17190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.69 0.33 -0.32
33 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.69 0.32 -0.32
34 AT5G42090 Lung seven transmembrane receptor family protein -0.68 0.29 -0.32
35 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 0.68 0.32 -0.31
36 AT1G70330 equilibrative nucleotide transporter 1 equilibrative nucleotide
transporter 1, equilibrative
nucleotide transporter 1		 -0.68 0.33 -0.31
37 AT5G51740 Peptidase family M48 family protein -0.68 0.31 -0.34
38 AT4G31340 myosin heavy chain-related -0.68 0.32 -0.33
39 AT5G63870 serine/threonine phosphatase 7 ATPP7, serine/threonine
phosphatase 7		 -0.68 0.33 -0.34
40 AT1G73670 MAP kinase 15 MAP kinase 15, MAP kinase 15 -0.68 0.3 -0.31
41 AT1G06740 transposable element gene 0.68 0.31 -0.32
42 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 -0.68 0.31 -0.32
43 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 -0.68 0.31 -0.31
44 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 -0.67 0.32 -0.33
45 AT3G07680 emp24/gp25L/p24 family/GOLD family protein -0.67 0.32 -0.33
46 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 -0.67 0.33 -0.3
47 AT5G23540 Mov34/MPN/PAD-1 family protein -0.67 0.33 -0.3
48 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 -0.67 0.32 -0.31
49 AT3G52740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits
to 65 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.33
50 AT5G40930 translocase of outer membrane 20-4 translocase of outer membrane 20-4 -0.67 0.32 -0.32
51 AT3G60820 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBF1 -0.67 0.31 -0.32
52 AT5G38470 Rad23 UV excision repair protein family RADIATION SENSITIVE23D -0.67 0.33 -0.32
53 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A -0.66 0.32 -0.32
54 AT5G54090 DNA mismatch repair protein MutS, type 2 0.66 0.29 -0.34
55 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.66 0.33 -0.33
56 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.33 -0.29
57 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 -0.66 0.29 -0.3
58 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 -0.65 0.29 -0.31
59 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.65 0.31 -0.3
60 AT4G08170 Inositol 1,3,4-trisphosphate 5/6-kinase family protein -0.65 0.32 -0.31
61 AT5G47920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.32 -0.32
62 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 -0.65 0.32 -0.33
63 AT5G20500 Glutaredoxin family protein -0.65 0.34 -0.31
64 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.65 0.3 -0.32
65 AT5G28050 Cytidine/deoxycytidylate deaminase family protein -0.65 0.32 -0.3
66 AT4G03320 translocon at the inner envelope membrane of chloroplasts
20-IV		 translocon at the inner envelope
membrane of chloroplasts 20-IV,
translocon at the inner envelope
membrane of chloroplasts 20-IV		 -0.65 0.3 -0.31
67 AT5G20090 Uncharacterised protein family (UPF0041) -0.65 0.33 -0.34
68 AT5G02280 SNARE-like superfamily protein -0.65 0.31 -0.29
69 AT1G64380 Integrase-type DNA-binding superfamily protein 0.65 0.34 -0.32
70 AT5G08060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 16 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.65 0.32 -0.33
71 AT5G43745 Protein of unknown function (DUF1012) -0.65 0.34 -0.34
72 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.64 0.31 -0.33
73 AT3G52560 ubiquitin E2 variant 1D-4 MMS2 ZWEI HOMOLOGUE 4, UBIQUITIN
E2 VARIANT 1D, ubiquitin E2
variant 1D-4		 -0.64 0.32 -0.32
74 AT2G30920 coenzyme Q 3 coenzyme Q 3, COQ3, coenzyme Q 3,
embryo defective 3002		 -0.64 0.31 -0.33
75 AT4G22220 SufE/NifU family protein ATISU1, ISU1 -0.64 0.32 -0.29
76 AT3G02520 general regulatory factor 7 GF14 NU, general regulatory factor
7		 -0.64 0.34 -0.29
77 AT5G60640 PDI-like 1-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 2, PDI-like
1-4, PROTEIN DISULFIDE ISOMERASE
2, PDI-like 1-4		 -0.64 0.32 -0.33
78 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 0.64 0.29 -0.32
79 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 -0.64 0.33 -0.34
80 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.63 0.32 -0.31
81 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 0.63 0.32 -0.3
82 AT1G50670 OTU-like cysteine protease family protein -0.63 0.31 -0.3
83 AT1G70690 Receptor-like protein kinase-related family protein HOPW1-1-INDUCED GENE1,
PLASMODESMATA-LOCATED PROTEIN 5		 -0.63 0.33 -0.3
84 AT1G59710 Protein of unknown function (DUF569) -0.63 0.31 -0.3
85 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 -0.63 0.31 -0.34
86 AT1G17160 pfkB-like carbohydrate kinase family protein -0.63 0.32 -0.32
87 AT3G03070 NADH-ubiquinone oxidoreductase-related -0.63 0.31 -0.31
88 AT1G73760 RING/U-box superfamily protein -0.63 0.31 -0.32
89 AT4G39660 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate
aminotransferase 2		 -0.63 0.33 -0.32
90 AT2G31570 glutathione peroxidase 2 glutathione peroxidase 2,
glutathione peroxidase 2		 -0.63 0.31 -0.31
91 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 -0.63 0.32 -0.32
92 AT4G17530 RAB GTPase homolog 1C RAB GTPase homolog 1C, ATRABD2C,
RAB1C, RAB GTPase homolog 1C		 -0.63 0.31 -0.3
93 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.63 0.32 -0.32
94 AT5G02590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.33 -0.32
95 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.62 0.32 -0.31
96 AT4G19470 Leucine-rich repeat (LRR) family protein 0.62 0.33 -0.31
97 AT3G24780 Uncharacterised conserved protein UCP015417, vWA 0.61 0.33 -0.29
98 AT4G03700 transposable element gene 0.61 0.32 -0.32
99 AT3G11280 Duplicated homeodomain-like superfamily protein 0.61 0.32 -0.32
100 AT1G58420 Uncharacterised conserved protein UCP031279 0.61 0.33 -0.31
101 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.61 0.32 -0.32
102 AT5G62770 Protein of unknown function (DUF1645) 0.61 0.33 -0.33
103 AT5G40460 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits
to 87 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.31 -0.31
104 AT4G01270 RING/U-box superfamily protein 0.59 0.3 -0.32
105 AT1G03620 ELMO/CED-12 family protein 0.59 0.32 -0.3
106 AT2G01670 nudix hydrolase homolog 17 nudix hydrolase homolog 17, nudix
hydrolase homolog 17		 0.59 0.32 -0.3
107 AT1G14480 Ankyrin repeat family protein 0.58 0.32 -0.31
108 AT1G49030 PLAC8 family protein 0.58 0.29 -0.33
109 AT4G03990 transposable element gene 0.57 0.32 -0.33
110 AT3G50060 myb domain protein 77 myb domain protein 77 0.57 0.31 -0.33
111 AT3G31340 transposable element gene 0.57 0.32 -0.3
112 AT3G47570 Leucine-rich repeat protein kinase family protein 0.57 0.35 -0.32
113 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein 0.56 0.29 -0.33
114 AT5G11570 Major facilitator superfamily protein 0.56 0.3 -0.32
115 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 0.56 0.31 -0.32
116 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.55 0.32 -0.34
117 AT1G72950 Disease resistance protein (TIR-NBS class) 0.55 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		-0.68 0.31 -0.31 C0090