AT5G40840 : Sister chromatid cohesion 1 (SCC1) protein homolog 2.....
Query Information
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AGICode AT5G40840
Description Rad21/Rec8-like family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 1 0.32 -0.31
2 AT1G52510 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.32
3 AT5G40970 Protein of unknown function (DUF 3339) -0.66 0.32 -0.33
4 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein -0.66 0.31 -0.31
5 AT5G06130 chaperone protein dnaJ-related -0.65 0.31 -0.3
6 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 -0.65 0.33 -0.31
7 AT4G09580 SNARE associated Golgi protein family -0.64 0.32 -0.3
8 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.62 0.33 -0.32
9 AT3G21670 Major facilitator superfamily protein -0.61 0.31 -0.32
10 AT3G01650 RING domain ligase1 RING domain ligase1 -0.6 0.33 -0.3
11 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.6 0.33 -0.31
12 AT1G78140 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.33 -0.31
13 AT5G07730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.34 -0.32
14 AT5G04440 Protein of unknown function (DUF1997) -0.6 0.32 -0.32
15 AT2G17340 Uncharacterised conserved protein (UCP030210) -0.59 0.31 -0.34
16 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.59 0.3 -0.31
17 AT5G26840 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.31 -0.32
18 AT1G70610 transporter associated with antigen processing protein 1 ATP-binding cassette B26,
transporter associated with
antigen processing protein 1,
transporter associated with
antigen processing protein 1		 -0.58 0.32 -0.36
19 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.34 -0.3
20 AT2G15240 UNC-50 family protein -0.58 0.31 -0.34
21 AT4G20800 FAD-binding Berberine family protein 0.58 0.32 -0.32
22 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 -0.58 0.3 -0.31
23 AT4G15250 B-box type zinc finger protein with CCT domain -0.58 0.32 -0.32
24 AT5G14720 Protein kinase superfamily protein -0.58 0.31 -0.3
25 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 -0.57 0.34 -0.33
26 AT1G33330 Class I peptide chain release factor -0.57 0.28 -0.32
27 AT2G37900 Major facilitator superfamily protein -0.57 0.3 -0.29
28 AT2G23420 nicotinate phosphoribosyltransferase 2 nicotinate
phosphoribosyltransferase 2		 -0.56 0.3 -0.33
29 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 0.56 0.31 -0.31
30 AT3G62190 Chaperone DnaJ-domain superfamily protein -0.56 0.33 -0.31
31 AT2G44930 Plant protein of unknown function (DUF247) -0.56 0.31 -0.3
32 AT2G30170 Protein phosphatase 2C family protein -0.56 0.3 -0.3
33 AT3G23220 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 1 -0.55 0.31 -0.33
34 AT1G55960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.55 0.34 -0.31
35 AT2G23510 spermidine disinapoyl acyltransferase spermidine disinapoyl
acyltransferase		 -0.55 0.33 -0.31
36 AT1G07840 Sas10/Utp3/C1D family 0.55 0.32 -0.33
37 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.55 0.31 -0.32
38 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 -0.55 0.29 -0.32
39 AT2G47680 zinc finger (CCCH type) helicase family protein 0.54 0.31 -0.33
40 AT3G56740 Ubiquitin-associated (UBA) protein -0.54 0.31 -0.32
41 AT2G41810 Protein of unknown function, DUF642 0.54 0.31 -0.31
42 AT1G19040 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.54 0.32 -0.32
43 AT1G49015 DPP6 N-terminal domain-like protein 0.54 0.3 -0.3
44 AT1G53670 methionine sulfoxide reductase B 1 ATMSRB1, methionine sulfoxide
reductase B 1		 -0.54 0.31 -0.32
45 AT1G34240 transposable element gene -0.54 0.32 -0.32
46 AT5G51020 crumpled leaf constitutive activator of
AAA-ATPase, CRUMPLED LEAF		 -0.53 0.3 -0.29
47 AT2G28840 XB3 ortholog 1 in Arabidopsis thaliana XB3 ortholog 1 in Arabidopsis
thaliana		 0.53 0.32 -0.32
48 AT4G24410 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.33 -0.32
49 AT5G61670 Encodes a close homolog of the Cauliflower OR (Orange)
protein. The function of OR is to induce the
differentiation of proplastids or other noncolored plastids
into chromoplasts for carotenoid accumulation. Both
proteins contain a Cysteine-rich zinc finger domain that is
highly specific to DnaJ-like molecular chaperons.		 -0.53 0.33 -0.32
50 AT2G18060 vascular related NAC-domain protein 1 Arabidopsis NAC domain containing
protein 37, vascular related
NAC-domain protein 1		 0.53 0.31 -0.33
51 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 -0.53 0.32 -0.31
52 AT1G52550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast
hits to 51 proteins in 18 species: Archae - 0; Bacteria -
8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other
Eukaryotes - 10 (source: NCBI BLink).		 -0.53 0.31 -0.3
53 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein 0.53 0.31 -0.31
54 AT4G05030 Copper transport protein family -0.53 0.3 -0.33
55 AT5G42490 ATP binding microtubule motor family protein 0.53 0.29 -0.31
56 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 -0.53 0.31 -0.33
57 AT4G01210 glycosyl transferase family 1 protein -0.53 0.34 -0.32
58 AT1G78220 general regulatory factor 13 GF 14 PI CHAIN, general regulatory
factor 13		 0.52 0.31 -0.32
59 AT1G11790 arogenate dehydratase 1 arogenate dehydratase 1,
Arabidopsis thaliana arogenate
dehydratase 1		 -0.52 0.32 -0.31
60 AT1G26090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.31 -0.3
61 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 -0.52 0.31 -0.31
62 AT4G10360 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.52 0.31 -0.3
63 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.51 0.32 -0.3
64 AT3G43280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19240.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.51 0.32 -0.32
65 AT1G16705 p300/CBP acetyltransferase-related protein-related -0.51 0.32 -0.33
66 AT2G25230 myb domain protein 100 myb domain protein 100, myb domain
protein 100		 -0.5 0.31 -0.3
67 AT2G24410 BEST Arabidopsis thaliana protein match is: SMAD/FHA
domain-containing protein (TAIR:AT3G20550.1); Has 194
Blast hits to 194 proteins in 92 species: Archae - 0;
Bacteria - 0; Metazoa - 118; Fungi - 33; Plants - 30;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).		 0.5 0.31 -0.3
68 AT1G69970 CLAVATA3/ESR-RELATED 26 CLAVATA3/ESR-RELATED 26 -0.5 0.3 -0.3
69 AT5G20940 Glycosyl hydrolase family protein -0.5 0.31 -0.3
70 AT1G27550 F-box family protein -0.5 0.33 -0.31
71 AT2G30460 Nucleotide/sugar transporter family protein -0.5 0.29 -0.33
72 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.5 0.32 -0.31
73 AT1G08070 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3102, ORGANELLE
TRANSCRIPT PROCESSING 82		 0.49 0.31 -0.31
74 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.49 0.32 -0.32
75 AT3G21040 transposable element gene 0.49 0.33 -0.31
76 AT3G17140 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.48 0.31 -0.3
77 AT1G48380 root hair initiation protein root hairless 1 (RHL1) HYPOCOTYL 7, ROOT HAIRLESS 1 0.48 0.32 -0.31
78 AT5G25830 GATA transcription factor 12 GATA transcription factor 12 0.48 0.31 -0.29
79 AT2G31035 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol
binding protein)-related protein 1B (TAIR:AT2G31030.1); Has
7 Blast hits to 7 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.48 0.3 -0.32
80 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.48 0.31 -0.34
81 AT5G65180 ENTH/VHS family protein 0.47 0.33 -0.31
82 AT5G23790 galactinol synthase 5 galactinol synthase 5, galactinol
synthase 5		 0.47 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.75 0.45 -0.46 C0035