AT5G40480 : embryo defective 3012
Query Information
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AGICode AT5G40480
Description embryo defective 3012
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40480 embryo defective 3012 embryo defective 3012 1 0.28 -0.29
2 AT5G09840 Putative endonuclease or glycosyl hydrolase 0.79 0.32 -0.32
3 AT5G18620 chromatin remodeling factor17 chromatin remodeling factor17 0.78 0.31 -0.31
4 AT3G06530 ARM repeat superfamily protein 0.77 0.32 -0.31
5 AT2G34357 ARM repeat superfamily protein 0.76 0.31 -0.32
6 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.75 0.31 -0.3
7 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.32 -0.32
8 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.74 0.33 -0.33
9 AT3G11964 RNA binding;RNA binding 0.74 0.29 -0.33
10 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.73 0.31 -0.32
11 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.33
12 AT1G74260 purine biosynthesis 4 purine biosynthesis 4 0.73 0.33 -0.32
13 AT5G27330 Prefoldin chaperone subunit family protein 0.72 0.31 -0.3
14 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 0.72 0.31 -0.33
15 AT4G12750 Homeodomain-like transcriptional regulator 0.71 0.32 -0.33
16 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.71 0.33 -0.32
17 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.71 0.34 -0.32
18 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.71 0.31 -0.32
19 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 0.69 0.31 -0.34
20 AT5G39960 GTP binding;GTP binding 0.69 0.32 -0.32
21 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.32 -0.31
22 AT3G18295 Protein of unknown function (DUF1639) -0.69 0.32 -0.29
23 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.68 0.32 -0.31
24 AT5G17440 LUC7 related protein 0.68 0.31 -0.33
25 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 0.68 0.33 -0.33
26 AT3G10690 DNA GYRASE A DNA GYRASE A 0.68 0.31 -0.32
27 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 0.67 0.31 -0.3
28 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.67 0.34 -0.31
29 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.67 0.34 -0.28
30 AT1G52590 Putative thiol-disulphide oxidoreductase DCC -0.67 0.31 -0.31
31 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.67 0.32 -0.31
32 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 -0.67 0.35 -0.33
33 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 0.66 0.31 -0.31
34 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.29 -0.32
35 AT1G15870 Mitochondrial glycoprotein family protein 0.66 0.3 -0.29
36 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.66 0.31 -0.32
37 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.66 0.31 -0.32
38 AT1G23960 Protein of unknown function (DUF626) -0.66 0.32 -0.31
39 AT1G72040 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.31 -0.3
40 AT1G10150 Carbohydrate-binding protein -0.65 0.31 -0.3
41 AT2G38710 AMMECR1 family -0.65 0.3 -0.32
42 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 -0.65 0.31 -0.31
43 AT3G02340 RING/U-box superfamily protein -0.64 0.33 -0.31
44 AT1G13880 ELM2 domain-containing protein -0.64 0.31 -0.29
45 AT4G31270 sequence-specific DNA binding transcription factors -0.64 0.31 -0.31
46 AT4G02010 Protein kinase superfamily protein 0.64 0.31 -0.32
47 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.32 -0.33
48 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.31 -0.33
49 AT1G71060 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.3 -0.33
50 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.61 0.31 -0.32
51 AT1G32700 PLATZ transcription factor family protein -0.6 0.32 -0.31
52 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 -0.59 0.33 -0.32
53 AT5G58800 Quinone reductase family protein -0.59 0.31 -0.32
54 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 -0.59 0.31 -0.32
55 AT5G65000 Nucleotide-sugar transporter family protein -0.59 0.33 -0.34
56 AT1G03610 Protein of unknown function (DUF789) -0.59 0.33 -0.3
57 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 -0.59 0.31 -0.33
58 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 -0.58 0.31 -0.33
59 AT5G24890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.3 -0.3
60 AT2G25070 Protein phosphatase 2C family protein -0.57 0.31 -0.29
61 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.31
62 AT1G48320 Thioesterase superfamily protein -0.57 0.34 -0.31
63 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.57 0.33 -0.31
64 AT1G71130 Integrase-type DNA-binding superfamily protein cytokinin response factor 8 -0.57 0.29 -0.31
65 AT2G39100 RING/U-box superfamily protein -0.56 0.31 -0.35
66 AT2G24130 Leucine-rich receptor-like protein kinase family protein -0.56 0.3 -0.33
67 AT3G15353 metallothionein 3 ATMT3, metallothionein 3 -0.56 0.33 -0.29
68 AT5G65960 GTP binding -0.55 0.31 -0.33
69 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 -0.55 0.32 -0.32
70 AT3G09470 Major facilitator superfamily protein -0.55 0.31 -0.33
71 AT3G11930 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.55 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
72 C0173 MST_2301.7 - - - 0.75 0.46 -0.46