AT5G40470 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G40470
Description RNI-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40470 RNI-like superfamily protein 1 0.3 -0.31
2 AT1G77400 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana
protein match is: hydroxyproline-rich glycoprotein family
protein (TAIR:AT1G21695.1); Has 328 Blast hits to 314
proteins in 61 species: Archae - 0; Bacteria - 12; Metazoa
- 130; Fungi - 28; Plants - 92; Viruses - 10; Other
Eukaryotes - 56 (source: NCBI BLink).		 0.77 0.33 -0.34
3 AT2G31190 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 2, weak auxin
response1		 0.77 0.3 -0.31
4 AT3G47560 alpha/beta-Hydrolases superfamily protein 0.77 0.31 -0.33
5 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 0.77 0.32 -0.33
6 AT3G11280 Duplicated homeodomain-like superfamily protein 0.77 0.3 -0.35
7 AT5G51830 pfkB-like carbohydrate kinase family protein -0.77 0.31 -0.32
8 AT1G16780 Inorganic H pyrophosphatase family protein AtVHP2;2, VHP2;2 0.77 0.31 -0.33
9 AT3G48360 BTB and TAZ domain protein 2 ATBT2, BTB and TAZ domain protein
2		 0.76 0.31 -0.33
10 AT5G42780 homeobox protein 27 homeobox protein 27, homeobox
protein 27, ZINC FINGER
HOMEODOMAIN 13		 0.76 0.31 -0.31
11 AT5G67420 LOB domain-containing protein 37 ASYMMETRIC LEAVES2-LIKE 39, LOB
domain-containing protein 37		 0.75 0.33 -0.35
12 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 -0.75 0.31 -0.31
13 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.74 0.3 -0.32
14 AT3G52740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits
to 65 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.31 -0.31
15 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.32 -0.32
16 AT1G37130 nitrate reductase 2 ARABIDOPSIS NITRATE REDUCTASE 2,
B29, CHLORATE RESISTANT 3, nitrate
reductase 2, NIA2-1, NITRATE
REDUCTASE, NITRATE REDUCTASE 2		 0.73 0.33 -0.32
17 AT5G54980 Uncharacterised protein family (UPF0497) 0.73 0.31 -0.31
18 AT1G77610 EamA-like transporter family protein -0.73 0.3 -0.3
19 AT4G37300 maternal effect embryo arrest 59 maternal effect embryo arrest 59 0.73 0.3 -0.33
20 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 -0.73 0.31 -0.3
21 AT4G11600 glutathione peroxidase 6 glutathione peroxidase 6,
glutathione peroxidase 6, LSC803,
PHGPX		 -0.73 0.3 -0.33
22 AT1G68190 B-box zinc finger family protein 0.72 0.3 -0.34
23 AT4G02610 Aldolase-type TIM barrel family protein 0.72 0.31 -0.32
24 AT1G31280 Argonaute family protein argonaute 2 -0.72 0.31 -0.32
25 AT3G43240 ARID/BRIGHT DNA-binding domain-containing protein -0.72 0.3 -0.33
26 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 -0.72 0.33 -0.29
27 AT3G49500 RNA-dependent RNA polymerase 6 RNA-dependent RNA polymerase 6,
SILENCING DEFECTIVE 1, SUPPRESSOR
OF GENE SILENCING 2		 0.72 0.31 -0.32
28 AT4G01330 Protein kinase superfamily protein 0.72 0.28 -0.31
29 AT3G03040 F-box/RNI-like superfamily protein 0.71 0.31 -0.31
30 AT3G19030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pyridoxine biosynthetic process, homoserine
biosynthetic process; LOCATED IN: endomembrane system;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.71 0.33 -0.3
31 AT5G54470 B-box type zinc finger family protein -0.71 0.29 -0.34
32 AT2G47730 glutathione S-transferase phi 8 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, Arabidopsis thaliana
glutathione S-transferase phi 8,
GST6, glutathione S-transferase
phi 8		 -0.71 0.3 -0.33
33 AT1G59710 Protein of unknown function (DUF569) -0.71 0.3 -0.3
34 AT3G18270 cytochrome P450, family 77, subfamily A, polypeptide 5
pseudogene		 cytochrome P450, family 77,
subfamily A, polypeptide 5
pseudogene		 0.71 0.31 -0.33
35 AT3G26890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits
to 383 proteins in 134 species: Archae - 0; Bacteria - 61;
Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.71 0.3 -0.31
36 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 -0.71 0.31 -0.34
37 AT5G24470 pseudo-response regulator 5 pseudo-response regulator 5,
pseudo-response regulator 5		 -0.71 0.3 -0.3
38 AT3G58975 pseudogene of F-box family protein 0.7 0.32 -0.34
39 AT5G14570 high affinity nitrate transporter 2.7 high affinity nitrate transporter
2.7, high affinity nitrate
transporter 2.7		 -0.7 0.32 -0.32
40 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A -0.7 0.33 -0.32
41 AT5G18140 Chaperone DnaJ-domain superfamily protein 0.7 0.32 -0.32
42 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 -0.7 0.33 -0.34
43 AT1G47710 Serine protease inhibitor (SERPIN) family protein -0.7 0.32 -0.33
44 AT1G54390 PHD finger protein-related INHIBITOR OF GROWTH 2 0.7 0.3 -0.29
45 AT3G46290 hercules receptor kinase 1 hercules receptor kinase 1 -0.69 0.33 -0.31
46 AT4G28600 no pollen germination related 2 no pollen germination related 2 -0.69 0.3 -0.32
47 AT3G24840 Sec14p-like phosphatidylinositol transfer family protein -0.69 0.33 -0.32
48 AT3G53990 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.3 -0.32
49 AT3G13030 hAT transposon superfamily protein 0.69 0.32 -0.31
50 AT4G23630 VIRB2-interacting protein 1 VIRB2-interacting protein 1,
Reticulan like protein B1		 -0.68 0.31 -0.3
51 AT4G14900 FRIGIDA-like protein -0.68 0.31 -0.31
52 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 -0.68 0.3 -0.33
53 AT1G35470 SPla/RYanodine receptor (SPRY) domain-containing protein 0.68 0.31 -0.31
54 AT2G29070 Ubiquitin fusion degradation UFD1 family protein -0.68 0.33 -0.33
55 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.34 -0.29
56 AT4G11220 VIRB2-interacting protein 2 VIRB2-interacting protein 2,
Reticulan like protein B2		 -0.68 0.33 -0.34
57 AT5G64880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.32 -0.32
58 AT4G33670 NAD(P)-linked oxidoreductase superfamily protein 0.68 0.33 -0.31
59 AT2G46220 Uncharacterized conserved protein (DUF2358) 0.68 0.33 -0.31
60 AT3G09350 Fes1A Fes1A -0.68 0.28 -0.32
61 AT3G13226 regulatory protein RecX family protein 0.68 0.31 -0.33
62 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 0.68 0.31 -0.32
63 AT4G39780 Integrase-type DNA-binding superfamily protein 0.68 0.32 -0.29
64 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 -0.68 0.32 -0.35
65 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 -0.67 0.3 -0.32
66 AT5G03230 Protein of unknown function, DUF584 0.67 0.31 -0.31
67 AT1G09415 NIM1-interacting 3 NIM1-interacting 3 0.67 0.31 -0.33
68 AT1G33230 TMPIT-like protein -0.67 0.32 -0.32
69 AT4G30600 signal recognition particle receptor alpha subunit family
protein		 -0.67 0.32 -0.3
70 AT1G11090 alpha/beta-Hydrolases superfamily protein -0.67 0.31 -0.32
71 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 -0.67 0.33 -0.34
72 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.67 0.3 -0.31
73 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 -0.67 0.32 -0.31
74 AT4G01510 Arv1-like protein ARV2 0.67 0.29 -0.33
75 AT4G10800 BEST Arabidopsis thaliana protein match is: BTB/POZ
domain-containing protein (TAIR:AT3G05675.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.67 0.31 -0.28
76 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 0.67 0.3 -0.31
77 AT1G54730 Major facilitator superfamily protein 0.66 0.31 -0.29
78 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 -0.66 0.3 -0.3
79 AT1G22770 gigantea protein (GI) FB, GIGANTEA -0.66 0.31 -0.33
80 AT2G17980 Sec1/munc18-like (SM) proteins superfamily ATSLY1 -0.66 0.31 -0.3
81 AT5G07820 Plant calmodulin-binding protein-related 0.66 0.32 -0.33
82 AT5G13090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.32 -0.34
83 AT1G71180 6-phosphogluconate dehydrogenase family protein 0.66 0.33 -0.29
84 AT2G23200 Protein kinase superfamily protein 0.66 0.31 -0.31
85 AT3G55580 Regulator of chromosome condensation (RCC1) family protein -0.66 0.33 -0.3
86 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.35 -0.31
87 AT5G49360 beta-xylosidase 1 BETA-XYLOSIDASE 1, beta-xylosidase
1		 0.66 0.31 -0.3
88 AT3G21560 UDP-Glycosyltransferase superfamily protein UGT84A2 -0.65 0.32 -0.33
89 AT1G43860 sequence-specific DNA binding transcription factors -0.65 0.3 -0.29
90 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 -0.65 0.29 -0.31
91 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.65 0.32 -0.3
92 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 -0.65 0.29 -0.32
93 AT5G15470 galacturonosyltransferase 14 galacturonosyltransferase 14 -0.65 0.34 -0.32
94 AT2G16365 F-box family protein -0.65 0.32 -0.32
95 AT4G37640 calcium ATPase 2 calcium ATPase 2 -0.65 0.33 -0.34
96 AT4G17310 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.33 -0.3
97 AT5G50840 CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.65 0.32 -0.31
98 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain -0.65 0.31 -0.32
99 AT3G07090 PPPDE putative thiol peptidase family protein -0.64 0.32 -0.3
100 AT3G51580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to
1607 proteins in 294 species: Archae - 2; Bacteria - 552;
Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38;
Other Eukaryotes - 253 (source: NCBI BLink).		 -0.64 0.31 -0.31
101 AT4G31340 myosin heavy chain-related -0.64 0.32 -0.32
102 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.32 -0.3
103 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 -0.63 0.32 -0.32
104 AT2G17280 Phosphoglycerate mutase family protein -0.63 0.32 -0.3
105 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.63 0.33 -0.31
106 AT3G43510 transposable element gene -0.63 0.32 -0.32
107 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 -0.63 0.34 -0.31
108 AT4G34990 myb domain protein 32 myb domain protein 32, myb domain
protein 32		 -0.63 0.31 -0.33
109 AT2G41000 Chaperone DnaJ-domain superfamily protein -0.63 0.31 -0.32
110 AT4G23040 Ubiquitin-like superfamily protein -0.63 0.31 -0.32
111 AT5G59480 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.63 0.3 -0.33
112 AT3G55120 Chalcone-flavanone isomerase family protein A11, CHALCONE FLAVANONE ISOMERASE,
TRANSPARENT TESTA 5		 -0.63 0.33 -0.32
113 AT3G14200 Chaperone DnaJ-domain superfamily protein -0.62 0.31 -0.34
114 AT4G12640 RNA recognition motif (RRM)-containing protein -0.62 0.31 -0.31
115 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.31 -0.31
116 AT4G15420 Ubiquitin fusion degradation UFD1 family protein -0.62 0.3 -0.3
117 AT3G11850 Protein of unknown function, DUF593 -0.62 0.34 -0.31
118 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.62 0.34 -0.31
119 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 -0.62 0.3 -0.31
120 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 -0.62 0.31 -0.31
121 AT1G69570 Dof-type zinc finger DNA-binding family protein -0.62 0.31 -0.33
122 AT5G23720 dual specificity protein phosphatase family protein PROPYZAMIDE-HYPERSENSITIVE 1 -0.62 0.32 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0167 MST_1744.8 - - - 0.8 0.45 -0.47
124 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		-0.74 0.32 -0.34 C0090
125 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.73 0.42 -0.46 C0153
126 C0176 MST_2406.9 - - - 0.7 0.44 -0.42
127 C0079 Digalactosyldiacylglycerol-34:5 - Digalactosyldiacylglycerol-34:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.67 0.44 -0.46 C0079
128 C0180 MST_2539.9 - - - 0.67 0.46 -0.49