AT5G40560 : DegP protease 13
Query Information
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AGICode AT5G40560
Description DegP protease 13
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40560 DegP protease 13 DegP protease 13 1 0.33 -0.33
2 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 -0.75 0.31 -0.3
3 AT1G18340 basal transcription factor complex subunit-related -0.69 0.33 -0.34
4 AT5G55900 Sucrase/ferredoxin-like family protein -0.68 0.29 -0.33
5 AT5G34900 transposable element gene -0.68 0.32 -0.33
6 AT1G43886 transposable element gene 0.67 0.32 -0.33
7 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein 0.67 0.33 -0.31
8 AT1G33000 transposable element gene -0.67 0.32 -0.32
9 AT3G60120 beta glucosidase 27 beta glucosidase 27 0.67 0.31 -0.31
10 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.3 -0.33
11 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 0.66 0.31 -0.33
12 AT4G19350 embryo defective 3006 embryo defective 3006 -0.66 0.32 -0.31
13 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.33 -0.31
14 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.65 0.32 -0.32
15 AT5G48140 Pectin lyase-like superfamily protein 0.65 0.31 -0.32
16 AT5G37420 Family of unknown function (DUF577) -0.63 0.3 -0.31
17 AT3G44440 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.31 -0.32
18 AT3G22040 Domain of unknown function (DUF26) 0.62 0.32 -0.31
19 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D 0.62 0.29 -0.33
20 AT5G53520 oligopeptide transporter 8 oligopeptide transporter 8,
oligopeptide transporter 8		 -0.62 0.34 -0.28
21 AT3G18570 Oleosin family protein -0.62 0.32 -0.32
22 AT2G38590 F-box and associated interaction domains-containing protein -0.62 0.29 -0.3
23 AT3G17080 Plant self-incompatibility protein S1 family 0.61 0.35 -0.32
24 AT5G64590 BEST Arabidopsis thaliana protein match is: Putative
endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.34 -0.31
25 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.61 0.31 -0.32
26 AT5G39440 SNF1-related protein kinase 1.3 SNF1-related protein kinase 1.3 -0.61 0.31 -0.32
27 AT5G35150 transposable element gene -0.61 0.32 -0.31
28 AT4G33280 AP2/B3-like transcriptional factor family protein 0.61 0.35 -0.3
29 AT1G51990 O-methyltransferase family protein -0.61 0.33 -0.31
30 AT2G21480 Malectin/receptor-like protein kinase family protein -0.61 0.32 -0.32
31 AT4G28130 diacylglycerol kinase 6 ATDGK6, diacylglycerol kinase 6 -0.6 0.32 -0.31
32 AT3G57460 catalytics;metal ion binding 0.6 0.31 -0.31
33 AT4G17790 SNARE associated Golgi protein family -0.6 0.32 -0.32
34 AT3G43140 transposable element gene -0.6 0.31 -0.32
35 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.59 0.3 -0.29
36 AT2G15260 RING/U-box superfamily protein -0.59 0.32 -0.3
37 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.34 -0.32
38 AT5G47280 ADR1-like 3 ADR1-like 3 -0.59 0.3 -0.32
39 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 0.59 0.33 -0.32
40 AT5G35820 transposable element gene 0.59 0.32 -0.32
41 AT1G30100 nine-cis-epoxycarotenoid dioxygenase 5 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 5,
nine-cis-epoxycarotenoid
dioxygenase 5		 -0.59 0.31 -0.31
42 AT1G31000 F-box and associated interaction domains-containing protein -0.59 0.33 -0.3
43 AT4G38230 calcium-dependent protein kinase 26 ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
26, calcium-dependent protein
kinase 26		 0.58 0.32 -0.32
44 AT2G01800 COP1-interacting protein-related 0.58 0.31 -0.33
45 AT3G02670 Glycine-rich protein family 0.58 0.32 -0.32
46 AT1G35150 General transcription factor 2-related zinc finger protein 0.58 0.31 -0.28
47 AT5G49370 Pleckstrin homology (PH) domain superfamily protein -0.58 0.31 -0.31
48 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.58 0.29 -0.33
49 AT2G20110 Tesmin/TSO1-like CXC domain-containing protein 0.58 0.32 -0.32
50 AT5G24110 WRKY DNA-binding protein 30 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 30, WRKY
DNA-binding protein 30		 0.58 0.32 -0.3
51 AT1G13290 C2H2-like zinc finger protein DEFECTIVELY ORGANIZED TRIBUTARIES
5, WIP domain protein 6		 0.58 0.32 -0.32
52 AT3G43120 SAUR-like auxin-responsive protein family -0.58 0.3 -0.34
53 AT1G67570 Protein of unknown function (DUF3537) -0.58 0.31 -0.31
54 AT3G29660 transposable element gene 0.58 0.31 -0.31
55 AT4G07780 transposable element gene 0.58 0.3 -0.32
56 AT1G54560 Myosin family protein with Dil domain MYOSIN XI E, XIE 0.57 0.31 -0.32
57 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 -0.57 0.31 -0.33
58 AT2G40316 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 27
(InterPro:IPR018939); Has 138 Blast hits to 138 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi -
62; Plants - 33; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.57 0.32 -0.32
59 AT2G28830 PLANT U-BOX 12 AtPUB12, PLANT U-BOX 12 0.57 0.33 -0.3
60 AT5G46010 Homeodomain-like superfamily protein 0.57 0.3 -0.31
61 AT2G03410 Mo25 family protein 0.57 0.31 -0.3
62 AT3G45510 RING/U-box protein 0.57 0.31 -0.29
63 AT1G32050 SCAMP family protein -0.56 0.32 -0.31
64 AT2G18780 F-box and associated interaction domains-containing protein -0.56 0.3 -0.31
65 AT5G08500 Transmembrane CLPTM1 family protein -0.56 0.32 -0.32
66 AT3G12830 SAUR-like auxin-responsive protein family -0.56 0.31 -0.32
67 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.56 0.32 -0.31
68 AT1G20940 F-box family protein -0.56 0.3 -0.34
69 AT5G66660 Protein of unknown function (DUF677) -0.56 0.31 -0.3
70 AT2G19410 U-box domain-containing protein kinase family protein 0.56 0.32 -0.3
71 AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly
factor-related		 -0.56 0.31 -0.33
72 AT1G34530 transposable element gene -0.55 0.32 -0.32
73 AT4G13800 Protein of unknown function (DUF803) 0.55 0.3 -0.31
74 AT1G35530 DEAD/DEAH box RNA helicase family protein 0.55 0.33 -0.32
75 AT3G60110 DNA-binding bromodomain-containing protein 0.55 0.33 -0.3
76 AT4G20840 FAD-binding Berberine family protein -0.55 0.31 -0.31
77 AT1G31310 hydroxyproline-rich glycoprotein family protein -0.55 0.31 -0.31
78 AT3G42730 transposable element gene 0.55 0.3 -0.33
79 AT5G60310 Concanavalin A-like lectin protein kinase family protein -0.55 0.34 -0.3
80 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein -0.55 0.3 -0.31
81 AT3G50730 Protein kinase superfamily protein -0.55 0.31 -0.31
82 AT3G16020 F-box associated ubiquitination effector protein -0.54 0.32 -0.29
83 AT1G64480 calcineurin B-like protein 8 calcineurin B-like protein 8 -0.54 0.31 -0.32
84 AT1G63210 Transcription elongation factor Spt6 -0.53 0.31 -0.31
85 AT4G26680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.32 -0.3
86 AT4G20370 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TWIN SISTER OF FT -0.53 0.29 -0.31
87 AT3G08750 F-box and associated interaction domains-containing protein -0.53 0.31 -0.33
88 AT3G31300 transposable element gene -0.53 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0180 MST_2539.9 - - - -0.66 0.47 -0.43
90 C0101 Glutamic acid D,L-Glutamic acid L-Glutamate; D-Glutamate tyrosine biosynthesis I,
serine biosynthesis,
tyrosine degradation I,
uridine-5'-phosphate biosynthesis,
proline biosynthesis III,
glutamate biosynthesis V,
glycine biosynthesis,
lysine biosynthesis VI,
leucine biosynthesis,
UDP-N-acetyl-D-glucosamine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle (plant pathway),
L-Ndelta-acetylornithine biosynthesis,
tryptophan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
4-hydroxyphenylpyruvate biosynthesis,
proline degradation II,
photorespiration,
5-aminoimidazole ribonucleotide biosynthesis I,
folate polyglutamylation,
ammonia assimilation cycle II,
arginine degradation VI (arginase 2 pathway),
asparagine biosynthesis III (tRNA-dependent),
tetrahydrofolate biosynthesis II,
glutamine biosynthesis III,
valine degradation I,
glucosinolate biosynthesis from dihomomethionine,
phenylalanine biosynthesis II,
citrulline biosynthesis,
gamma-glutamyl cycle,
indole-3-acetyl-amino acid biosynthesis,
purine nucleotides de novo biosynthesis II,
IAA biosynthesis I,
NAD biosynthesis I (from aspartate),
alanine biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
glucosinolate biosynthesis from homomethionine,
phenylalanine degradation III,
ornithine biosynthesis,
glutathione-mediated detoxification II,
pyrimidine ribonucleotides interconversion,
indole glucosinolate breakdown (active in intact plant cell),
aspartate degradation II,
glucosinolate biosynthesis from trihomomethionine,
glucosinolate biosynthesis from tetrahomomethionine,
L-glutamine biosynthesis II (tRNA-dependent),
camalexin biosynthesis,
glutathione biosynthesis,
aspartate biosynthesis,
leucine degradation I,
glutathione degradation,
pyridine nucleotide cycling (plants),
glutamate degradation I,
valine biosynthesis,
glucosinolate biosynthesis from tryptophan,
arginine biosynthesis II (acetyl cycle),
isoleucine biosynthesis I (from threonine),
arginine biosynthesis I,
arginine degradation I (arginase pathway),
glucosinolate biosynthesis from hexahomomethionine,
tetrapyrrole biosynthesis I,
alanine degradation III,
pyridoxal 5'-phosphate biosynthesis II,
glutamate biosynthesis IV,
glutamate degradation IV,
asparagine biosynthesis I,
histidine biosynthesis,
lysine degradation II,
pantothenate biosynthesis,
isoleucine degradation I,
folate polyglutamylation II,
glutamine biosynthesis I,
glucosinolate biosynthesis from phenylalanine,
tyrosine biosynthesis II,
nitrate reduction II (assimilatory),
alanine degradation II (to D-lactate) 		-0.56 0.33 -0.32 C0101