AT5G40130 : -
Query Information
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AGICode AT5G40130
Description 60S ribosomal protein L5 (RPL5C), pseudogene, 60S RIBOSOMAL PROTEIN L5, Arabidopsis thaliana, SWISSPROT:RL5_ARATH; blastp match of 70% identity and 7.9e-26 P-value to GP|13359453|dbj|BAB33422.1||AB049724 putative senescence-associated protein {Pisum sativum}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40130 60S ribosomal protein L5 (RPL5C), pseudogene, 60S RIBOSOMAL
PROTEIN L5, Arabidopsis thaliana, SWISSPROT:RL5_ARATH;
blastp match of 70% identity and 7.9e-26 P-value to
GP|13359453|dbj|BAB33422.1||AB049724 putative
senescence-associated protein {Pisum sativum}		 1 0.3 -0.31
2 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.62 0.32 -0.31
3 AT1G02490 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.62 0.34 -0.33
4 AT5G60410 DNA-binding protein with MIZ/SP-RING zinc finger,
PHD-finger and SAP domain		 ATSIZ1, SIZ1 0.62 0.36 -0.3
5 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.32 -0.31
6 AT5G41250 Exostosin family protein 0.6 0.33 -0.34
7 AT2G23260 UDP-glucosyl transferase 84B1 UDP-glucosyl transferase 84B1 0.59 0.32 -0.31
8 AT2G17210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.29 -0.3
9 AT4G11340 Disease resistance protein (TIR-NBS-LRR class) family 0.57 0.31 -0.32
10 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 0.57 0.32 -0.31
11 AT5G22540 Plant protein of unknown function (DUF247) 0.57 0.29 -0.31
12 AT1G09370 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.57 0.28 -0.32
13 AT5G27810 MADS-box transcription factor family protein -0.57 0.31 -0.33
14 AT5G55960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0118
(InterPro:IPR002549); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.33 -0.31
15 AT5G03980 SGNH hydrolase-type esterase superfamily protein -0.56 0.3 -0.32
16 AT5G63320 nuclear protein X1 nuclear protein X1 0.55 0.34 -0.33
17 AT1G03687 DTW domain-containing protein -0.55 0.32 -0.31
18 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.55 0.33 -0.3
19 AT3G22340 transposable element gene 0.55 0.3 -0.32
20 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 -0.55 0.33 -0.31
21 AT3G09750 Galactose oxidase/kelch repeat superfamily protein 0.55 0.32 -0.3
22 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 -0.54 0.32 -0.31
23 AT1G42610 transposable element gene 0.53 0.31 -0.29
24 AT2G14410 pseudogene, hypothetical protein, similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)(SP:Q99323)
{Drosophila melanogaster}		 0.52 0.33 -0.31
25 AT5G20930 Protein kinase superfamily protein TOUSLED 0.52 0.34 -0.31
26 AT1G14260 RING/FYVE/PHD zinc finger superfamily protein 0.52 0.3 -0.33
27 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 -0.51 0.32 -0.33
28 AT5G28760 transposable element gene -0.51 0.3 -0.3
29 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.51 0.3 -0.32
30 AT1G07540 TRF-like 2 TRF-like 2 -0.51 0.32 -0.32
31 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.5 0.33 -0.33
32 AT5G22910 cation/H+ exchanger 9 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 9, cation/H+ exchanger
9		 0.5 0.32 -0.31
33 AT3G17490 F-box and associated interaction domains-containing protein -0.5 0.32 -0.3
34 AT1G27720 TBP-associated factor 4B TBP-associated factor 4,
TBP-associated factor 4B		 -0.49 0.33 -0.31
35 AT4G30120 heavy metal atpase 3 A. THALIANA HEAVY METAL ATPASE 3,
heavy metal atpase 3		 0.49 0.3 -0.31
36 AT3G25960 Pyruvate kinase family protein 0.49 0.31 -0.29
37 AT1G55950 DNA-binding storekeeper protein-related transcriptional
regulator		 0.49 0.31 -0.32
38 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.49 0.31 -0.33
39 AT3G56000 cellulose synthase like A14 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A14, cellulose
synthase like A14		 0.48 0.31 -0.31
40 AT5G36870 glucan synthase-like 9 glucan synthase-like 9, atgsl9,
gsl09, glucan synthase-like 9		 0.48 0.31 -0.31
41 AT4G28830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.48 0.3 -0.32
42 AT5G30450 transposable element gene 0.48 0.31 -0.32
43 AT4G15860 transposable element gene -0.47 0.29 -0.34
44 AT3G10950 Zinc-binding ribosomal protein family protein 0.47 0.33 -0.31
45 AT1G52680 late embryogenesis abundant protein-related / LEA
protein-related		 0.47 0.28 -0.31
46 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 0.46 0.32 -0.31
47 AT4G03156 small GTPase-related 0.46 0.29 -0.32
48 AT5G10270 cyclin-dependent kinase C;1 cyclin-dependent kinase C;1 -0.46 0.31 -0.31
49 AT3G62780 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.46 0.31 -0.31
50 AT2G22120 RING/FYVE/PHD zinc finger superfamily protein -0.46 0.33 -0.3
51 AT3G14490 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.46 0.32 -0.3
52 AT2G22050 Galactose oxidase/kelch repeat superfamily protein 0.46 0.31 -0.31
53 AT3G06630 protein kinase family protein 0.46 0.33 -0.29
54 AT1G11560 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.46 0.31 -0.33
55 AT5G38330 low-molecular-weight cysteine-rich 80 low-molecular-weight cysteine-rich
80		 0.46 0.32 -0.3
56 AT3G53060 SKP1-like 6 SKP1-like 6, SKP1-like 6 -0.46 0.3 -0.33
57 AT4G10410 Leucine-rich repeat (LRR) family protein 0.45 0.34 -0.32
58 AT5G32600 transposable element gene 0.45 0.32 -0.32
59 AT5G59370 actin 4 actin 4 -0.45 0.33 -0.28
60 AT5G56470 FAD-dependent oxidoreductase family protein -0.45 0.31 -0.29
61 AT2G14030 transposable element gene 0.45 0.31 -0.29
62 AT2G31420 Domain of unknown function (DUF313) 0.45 0.3 -0.31
63 AT5G05490 Rad21/Rec8-like family protein ATREC8, DETERMINATE, INFERTILE 1,
REC8, SYNAPTIC 1		 -0.43 0.32 -0.32
64 AT5G17970 Disease resistance protein (TIR-NBS-LRR class) family -0.42 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
65 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.66 0.46 -0.45 C0016
66 C0160 MST_1509.5 - - - -0.65 0.44 -0.47
67 C0163 MST_1589.2 - - - -0.63 0.45 -0.46
68 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		0.48 0.3 -0.34 C0148