AT5G40190 : -
Query Information
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AGICode AT5G40190
Description RNA ligase/cyclic nucleotide phosphodiesterase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 1 0.3 -0.31
2 AT1G63110 GPI transamidase subunit PIG-U 0.78 0.34 -0.34
3 AT5G42390 Insulinase (Peptidase family M16) family protein stromal processing peptidase 0.74 0.3 -0.32
4 AT2G19790 SNARE-like superfamily protein 0.73 0.31 -0.33
5 AT4G12060 Double Clp-N motif protein 0.71 0.3 -0.34
6 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.7 0.32 -0.31
7 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b 0.7 0.32 -0.31
8 AT1G78620 Protein of unknown function DUF92, transmembrane 0.7 0.33 -0.32
9 AT4G25770 alpha/beta-Hydrolases superfamily protein 0.69 0.31 -0.3
10 AT1G05500 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ARABIDOPSIS THALIANA SYNAPTOTAGMIN
HOMOLOG E, NTMC2T2.1,
NTMC2TYPE2.1, synaptotagmin 5,
SYNAPTOTAGMIN HOMOLOG E		 0.69 0.32 -0.32
11 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 -0.69 0.31 -0.3
12 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 -0.69 0.3 -0.31
13 AT3G53370 S1FA-like DNA-binding protein 0.68 0.32 -0.32
14 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.32 -0.3
15 AT1G06060 LisH and RanBPM domains containing protein 0.68 0.3 -0.29
16 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.32
17 AT2G44620 mitochondrial acyl carrier protein 1 mitochondrial acyl carrier protein
1, MITOCHONDRIAL ACYL CARRIER
PROTEIN 1		 0.68 0.29 -0.31
18 AT2G01410 NHL domain-containing protein 0.67 0.35 -0.31
19 AT1G11570 NTF2-like NTF2-like 0.67 0.31 -0.3
20 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.67 0.3 -0.34
21 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 0.67 0.33 -0.32
22 AT5G20650 copper transporter 5 copper transporter 5 0.67 0.3 -0.32
23 AT1G79880 RNA recognition motif (RRM)-containing protein -0.67 0.3 -0.32
24 AT5G55290 ATPase, V0 complex, subunit E 0.67 0.31 -0.33
25 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 0.66 0.33 -0.33
26 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 -0.66 0.31 -0.33
27 AT2G28370 Uncharacterised protein family (UPF0497) 0.66 0.32 -0.3
28 AT1G61780 postsynaptic protein-related 0.66 0.32 -0.32
29 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.29 -0.3
30 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 0.66 0.31 -0.31
31 AT5G55160 small ubiquitin-like modifier 2 ATSUMO2, SMALL UBIQUITIN-LIKE
MODIFIER 2, SMALL UBIQUITIN-LIKE
MODIFIER 2, small ubiquitin-like
modifier 2		 0.66 0.32 -0.29
32 AT5G10620 methyltransferases 0.65 0.31 -0.32
33 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.65 0.31 -0.32
34 AT3G44830 Lecithin:cholesterol acyltransferase family protein 0.65 0.3 -0.31
35 AT5G38470 Rad23 UV excision repair protein family RADIATION SENSITIVE23D 0.65 0.3 -0.32
36 AT1G34750 Protein phosphatase 2C family protein -0.65 0.3 -0.3
37 AT4G29530 Pyridoxal phosphate phosphatase-related protein 0.64 0.31 -0.3
38 AT5G51980 Transducin/WD40 repeat-like superfamily protein 0.64 0.32 -0.32
39 AT5G54090 DNA mismatch repair protein MutS, type 2 -0.64 0.31 -0.31
40 AT1G80870 Protein kinase superfamily protein -0.64 0.31 -0.32
41 AT5G60860 RAB GTPase homolog A1F RAB GTPase homolog A1F, RAB GTPase
homolog A1F		 0.63 0.3 -0.32
42 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 0.63 0.31 -0.33
43 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.63 0.32 -0.3
44 AT1G14290 sphingoid base hydroxylase 2 sphingoid base hydroxylase 2 0.63 0.31 -0.3
45 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.32 -0.29
46 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B 0.63 0.31 -0.31
47 AT1G77350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function KRTCAP2
(InterPro:IPR018614); Has 141 Blast hits to 141 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi -
0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 0.63 0.31 -0.32
48 AT4G03860 transposable element gene 0.63 0.32 -0.33
49 AT5G18120 APR-like 7 APR-like 7, APR-like 7 0.63 0.31 -0.33
50 AT3G20570 early nodulin-like protein 9 AtENODL9, early nodulin-like
protein 9		 0.62 0.31 -0.3
51 AT2G19290 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.31 -0.32
52 AT5G51740 Peptidase family M48 family protein 0.62 0.32 -0.31
53 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 -0.62 0.3 -0.3
54 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.62 0.3 -0.31
55 AT1G75960 AMP-dependent synthetase and ligase family protein 0.62 0.29 -0.33
56 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 -0.61 0.35 -0.32
57 AT3G31340 transposable element gene -0.61 0.31 -0.32
58 AT1G71690 Protein of unknown function (DUF579) -0.61 0.33 -0.28
59 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 -0.61 0.33 -0.32
60 AT5G62770 Protein of unknown function (DUF1645) -0.61 0.31 -0.31
61 AT1G07740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.32 -0.32
62 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.6 0.32 -0.3
63 AT1G14850 nucleoporin 155 nucleoporin 155 -0.59 0.34 -0.32
64 AT4G30770 Putative membrane lipoprotein -0.58 0.31 -0.31
65 AT2G06150 transposable element gene -0.58 0.3 -0.31
66 AT2G16260 pseudogene of glycine-rich RNA-binding protein glycine-rich RNA-binding protein 1 -0.57 0.31 -0.32
67 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 -0.57 0.34 -0.31
68 AT5G52070 Agenet domain-containing protein -0.57 0.31 -0.3
69 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 -0.55 0.29 -0.32
70 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.31 -0.29
71 AT4G23840 Leucine-rich repeat (LRR) family protein -0.55 0.33 -0.3
72 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.33 -0.3
73 AT2G10050 transposable element gene -0.54 0.32 -0.33
74 AT1G72240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.3 -0.32
75 AT5G25530 DNAJ heat shock family protein -0.53 0.32 -0.33
76 AT1G33390 RNA helicase family protein FASCIATED STEM 4, FASCIATED STEM 4 -0.53 0.32 -0.32
77 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.7 0.46 -0.44 C0105