AT5G39840 : -
Query Information
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AGICode AT5G39840
Description ATP-dependent RNA helicase, mitochondrial, putative
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 1 0.29 -0.29
2 AT3G11964 RNA binding;RNA binding 0.89 0.33 -0.32
3 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.87 0.3 -0.29
4 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.86 0.33 -0.3
5 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.85 0.31 -0.33
6 AT3G06530 ARM repeat superfamily protein 0.84 0.32 -0.29
7 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.83 0.31 -0.32
8 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.82 0.3 -0.32
9 AT4G30990 ARM repeat superfamily protein 0.8 0.35 -0.31
10 AT1G79150 binding 0.8 0.32 -0.32
11 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.8 0.31 -0.32
12 AT2G18220 Noc2p family 0.79 0.33 -0.3
13 AT3G58660 Ribosomal protein L1p/L10e family 0.79 0.31 -0.33
14 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.78 0.3 -0.33
15 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 0.78 0.32 -0.3
16 AT2G34357 ARM repeat superfamily protein 0.78 0.32 -0.33
17 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.78 0.32 -0.31
18 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.78 0.29 -0.3
19 AT3G10690 DNA GYRASE A DNA GYRASE A 0.78 0.32 -0.31
20 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.77 0.33 -0.32
21 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.77 0.32 -0.3
22 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.76 0.29 -0.29
23 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.76 0.32 -0.31
24 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.76 0.29 -0.32
25 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.75 0.32 -0.3
26 AT5G09840 Putative endonuclease or glycosyl hydrolase 0.75 0.32 -0.31
27 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.33 -0.31
28 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 0.75 0.28 -0.31
29 AT1G51380 DEA(D/H)-box RNA helicase family protein 0.74 0.3 -0.32
30 AT3G53940 Mitochondrial substrate carrier family protein 0.74 0.32 -0.34
31 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.74 0.32 -0.3
32 AT3G60340 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.31
33 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 -0.74 0.32 -0.31
34 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.73 0.29 -0.3
35 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.73 0.32 -0.31
36 AT3G54360 zinc ion binding -0.73 0.32 -0.29
37 AT5G65760 Serine carboxypeptidase S28 family protein -0.72 0.32 -0.3
38 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.32 -0.31
39 AT1G64600 methyltransferases;copper ion binding 0.72 0.32 -0.33
40 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.72 0.31 -0.33
41 AT5G27330 Prefoldin chaperone subunit family protein 0.72 0.32 -0.28
42 AT5G40480 embryo defective 3012 embryo defective 3012 0.72 0.32 -0.3
43 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.72 0.34 -0.31
44 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.72 0.3 -0.32
45 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.72 0.3 -0.31
46 AT1G12050 fumarylacetoacetase, putative -0.71 0.32 -0.32
47 AT5G17270 Protein prenylyltransferase superfamily protein 0.71 0.31 -0.3
48 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 0.71 0.32 -0.32
49 AT5G50310 Galactose oxidase/kelch repeat superfamily protein 0.71 0.31 -0.35
50 AT5G48930 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl
transferase		 hydroxycinnamoyl-CoA
shikimate/quinate hydroxycinnamoyl
transferase		 -0.71 0.32 -0.3
51 AT4G27010 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G72270.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 EMBRYO DEFECTIVE 2788 0.71 0.32 -0.32
52 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.31 -0.28
53 AT4G36580 AAA-type ATPase family protein 0.71 0.3 -0.32
54 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.32
55 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.71 0.35 -0.32
56 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.7 0.33 -0.29
57 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF 0.7 0.35 -0.33
58 AT5G14440 Surfeit locus protein 2 (SURF2) 0.7 0.3 -0.32
59 AT4G38810 Calcium-binding EF-hand family protein -0.7 0.3 -0.3
60 AT5G58740 HSP20-like chaperones superfamily protein -0.7 0.32 -0.32
61 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.69 0.3 -0.31
62 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.32
63 AT1G23960 Protein of unknown function (DUF626) -0.69 0.32 -0.32
64 AT5G05230 RING/U-box superfamily protein -0.68 0.3 -0.34
65 AT2G38710 AMMECR1 family -0.68 0.31 -0.3
66 AT2G04160 Subtilisin-like serine endopeptidase family protein AUXIN-INDUCED IN ROOT CULTURES 3 -0.67 0.33 -0.32
67 AT3G44950 glycine-rich protein -0.67 0.31 -0.33
68 AT4G14930 Survival protein SurE-like phosphatase/nucleotidase -0.67 0.32 -0.31
69 AT4G29420 F-box/RNI-like superfamily protein -0.67 0.32 -0.31
70 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.67 0.32 -0.32
71 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.67 0.32 -0.34
72 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 -0.67 0.32 -0.34
73 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.67 0.3 -0.31
74 AT5G21090 Leucine-rich repeat (LRR) family protein -0.66 0.32 -0.3
75 AT1G03610 Protein of unknown function (DUF789) -0.66 0.32 -0.29
76 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.66 0.31 -0.31
77 AT4G29820 homolog of CFIM-25 ARABIDOPSIS THALIANA HOMOLOG OF
CFIM-25, homolog of CFIM-25		 -0.65 0.32 -0.31
78 AT2G34310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G29530.1); Has 1236 Blast hits to 680 proteins in
89 species: Archae - 0; Bacteria - 0; Metazoa - 473; Fungi
- 0; Plants - 332; Viruses - 0; Other Eukaryotes - 431
(source: NCBI BLink).		 -0.65 0.31 -0.33
79 AT1G10150 Carbohydrate-binding protein -0.65 0.32 -0.34
80 AT4G09600 GAST1 protein homolog 3 GAST1 protein homolog 3 -0.65 0.31 -0.3
81 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 -0.65 0.3 -0.31
82 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.65 0.31 -0.32
83 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase -0.64 0.32 -0.31
84 AT3G54390 sequence-specific DNA binding transcription factors -0.64 0.31 -0.31
85 AT1G72760 Protein kinase superfamily protein -0.64 0.34 -0.34
86 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.33 -0.32
87 AT2G43330 inositol transporter 1 INOSITOL TRANSPORTER 1, inositol
transporter 1		 -0.64 0.3 -0.33
88 AT1G21770 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.64 0.32 -0.31
89 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.63 0.35 -0.3
90 AT1G13880 ELM2 domain-containing protein -0.63 0.33 -0.32
91 AT3G48350 Cysteine proteinases superfamily protein cysteine endopeptidase 3 -0.63 0.3 -0.32
92 AT2G23780 RING/U-box superfamily protein -0.63 0.31 -0.32
93 AT2G43400 electron-transfer flavoprotein:ubiquinone oxidoreductase electron-transfer
flavoprotein:ubiquinone
oxidoreductase		 -0.63 0.32 -0.34