AT5G39980 : -
Query Information
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AGICode AT5G39980
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.33 -0.3
2 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.85 0.31 -0.33
3 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.85 0.3 -0.33
4 AT5G50280 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1006 0.83 0.3 -0.3
5 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.83 0.33 -0.33
6 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.82 0.33 -0.29
7 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.81 0.31 -0.32
8 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.8 0.32 -0.33
9 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.8 0.31 -0.31
10 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.79 0.32 -0.33
11 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.79 0.31 -0.31
12 AT5G08400 Protein of unknown function (DUF3531) 0.77 0.3 -0.32
13 AT3G59840 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 72
Blast hits to 72 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.33 -0.33
14 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.76 0.32 -0.34
15 AT5G63140 purple acid phosphatase 29 purple acid phosphatase 29, PAP29,
purple acid phosphatase 29		 0.76 0.32 -0.31
16 AT5G57180 chloroplast import apparatus 2 chloroplast import apparatus 2 0.76 0.3 -0.31
17 AT5G23070 Thymidine kinase 0.76 0.28 -0.32
18 AT1G28530 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.76 0.3 -0.3
19 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.75 0.34 -0.32
20 AT5G52010 C2H2-like zinc finger protein 0.75 0.3 -0.32
21 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 0.74 0.32 -0.32
22 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.33 -0.31
23 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.73 0.3 -0.32
24 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.73 0.3 -0.34
25 AT5G51120 polyadenylate-binding protein 1 POLYADENYLATE-BINDING PROTEIN 1,
polyadenylate-binding protein 1		 0.72 0.3 -0.32
26 AT5G24690 Protein of unknown function (DUF3411) 0.72 0.32 -0.32
27 AT5G43920 transducin family protein / WD-40 repeat family protein 0.72 0.3 -0.31
28 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.68 0.31 -0.29
29 AT5G23640 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.67 0.31 -0.33
30 AT5G41800 Transmembrane amino acid transporter family protein -0.65 0.31 -0.34
31 AT3G29075 glycine-rich protein -0.63 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
32 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.72 0.44 -0.41
33 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.62 0.45 -0.45 C0091