AT5G39590 : -
Query Information
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AGICode AT5G39590
Description TLD-domain containing nucleolar protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G39590 TLD-domain containing nucleolar protein 1 0.3 -0.31
2 AT5G14780 formate dehydrogenase formate dehydrogenase 0.78 0.3 -0.32
3 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.72 0.3 -0.31
4 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.72 0.3 -0.31
5 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease 0.7 0.31 -0.3
6 AT1G28520 vascular plant one zinc finger protein VASCULAR PLANT ONE ZINC FINGER
PROTEIN, vascular plant one zinc
finger protein		 0.7 0.32 -0.35
7 AT3G51890 Clathrin light chain protein 0.69 0.32 -0.3
8 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.69 0.31 -0.33
9 AT3G48990 AMP-dependent synthetase and ligase family protein 0.67 0.31 -0.29
10 AT3G07690 6-phosphogluconate dehydrogenase family protein 0.67 0.31 -0.29
11 AT5G29000 Homeodomain-like superfamily protein PHR1-like 1 0.66 0.32 -0.31
12 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.65 0.32 -0.32
13 AT2G45210 SAUR-like auxin-responsive protein family 0.64 0.32 -0.31
14 AT2G16700 actin depolymerizing factor 5 actin depolymerizing factor 5,
ATADF5		 0.64 0.31 -0.32
15 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.63 0.32 -0.34
16 AT5G20620 ubiquitin 4 ubiquitin 4 0.6 0.3 -0.32
17 AT1G48320 Thioesterase superfamily protein 0.6 0.34 -0.32
18 AT2G13100 Major facilitator superfamily protein glycerol-3-phosphate permease 5,
glycerol-3-phosphate permease 5		 0.6 0.31 -0.31
19 AT1G60140 trehalose phosphate synthase trehalose phosphate synthase,
trehalose phosphate synthase,
TREHALOSE PHOSPHATE SYNTHASE 10		 0.59 0.31 -0.34
20 AT5G49630 amino acid permease 6 amino acid permease 6 -0.59 0.31 -0.34
21 AT5G57655 xylose isomerase family protein 0.58 0.34 -0.31
22 AT1G04250 AUX/IAA transcriptional regulator family protein AUXIN RESISTANT 3, indole-3-acetic
acid inducible 17		 -0.58 0.3 -0.32
23 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 0.57 0.32 -0.32
24 AT1G64780 ammonium transporter 1;2 ammonium transporter 1;2, ammonium
transporter 1;2		 -0.57 0.31 -0.31
25 AT1G14340 RNA-binding (RRM/RBD/RNP motifs) family protein 0.56 0.3 -0.31
26 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.56 0.31 -0.29
27 AT3G51150 ATP binding microtubule motor family protein -0.55 0.31 -0.33
28 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein 0.53 0.3 -0.32
29 AT3G60640 Ubiquitin-like superfamily protein AUTOPHAGY 8G 0.53 0.27 -0.31
30 AT2G22830 squalene epoxidase 2 squalene epoxidase 2 -0.52 0.3 -0.32
31 AT1G36240 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.52 0.31 -0.31
32 AT4G04920 sensitive to freezing 6 AtSFR6, SENSITIVE TO FREEZING 6 0.52 0.29 -0.33
33 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 -0.52 0.31 -0.33
34 AT2G27920 serine carboxypeptidase-like 51 serine carboxypeptidase-like 51 0.52 0.31 -0.32
35 AT5G01740 Nuclear transport factor 2 (NTF2) family protein 0.52 0.33 -0.33
36 AT1G52520 FAR1-related sequence 6 FAR1-related sequence 6 -0.52 0.32 -0.31
37 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 -0.51 0.31 -0.32
38 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.51 0.31 -0.32
39 AT5G14940 Major facilitator superfamily protein 0.51 0.3 -0.33
40 AT5G61430 NAC domain containing protein 100 NAC domain containing protein 100,
ATNAC5, NAC domain containing
protein 100		 0.51 0.31 -0.3
41 AT1G73310 serine carboxypeptidase-like 4 serine carboxypeptidase-like 4 -0.51 0.31 -0.32
42 AT3G02440 TRICHOME BIREFRINGENCE-LIKE 20 TRICHOME BIREFRINGENCE-LIKE 20 -0.5 0.33 -0.31
43 AT2G18630 Protein of unknown function (DUF677) -0.49 0.33 -0.28
44 AT3G45610 Dof-type zinc finger DNA-binding family protein DOF transcription factor 6 -0.49 0.32 -0.32
45 AT5G38080 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38090.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.48 0.32 -0.32
46 AT3G15800 Glycosyl hydrolase superfamily protein -0.47 0.3 -0.31
47 AT2G40230 HXXXD-type acyl-transferase family protein -0.47 0.33 -0.32
48 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 -0.47 0.3 -0.33
49 AT3G29060 EXS (ERD1/XPR1/SYG1) family protein -0.47 0.31 -0.33
50 AT1G20080 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ATSYTB, NTMC2T1.2, NTMC2TYPE1.2,
synaptotagmin 2, SYTB		 -0.46 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.81 0.49 -0.45 C0016
52 C0170 MST_2128.3 - - - -0.73 0.48 -0.46
53 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		0.62 0.43 -0.43 C0015
54 C0140 Lysine L-Lysine L-Lysine lysine degradation II,
tRNA charging,
lysine biosynthesis VI,
lysine degradation I 		0.55 0.31 -0.31 C0140
55 C0112 Histidine L-Histidine L-Histidine tRNA charging,
histidine biosynthesis 		0.54 0.31 -0.31 C0112
56 C0209 Phosphoric acid - - ascorbate biosynthesis,
GDP biosynthesis,
polysaccharide biosynthesis 		-0.53 0.32 -0.31