AT5G39600 : -
Query Information
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AGICode AT5G39600
Description CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G39600 CONTAINS InterPro DOMAIN/s: Ribosomal protein L53,
mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50
proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa -
6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink).		 1 0.33 -0.29
2 AT5G09770 Ribosomal protein L17 family protein 0.78 0.31 -0.31
3 AT1G14620 decoy DECOY 0.77 0.32 -0.29
4 AT3G13580 Ribosomal protein L30/L7 family protein 0.75 0.32 -0.34
5 AT4G14760 kinase interacting (KIP1-like) family protein -0.75 0.31 -0.32
6 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 0.74 0.32 -0.3
7 AT1G73940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits
to 54 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.33 -0.3
8 AT1G70900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits
to 57 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.3 -0.31
9 AT1G28410 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: myosin heavy chain-related (TAIR:AT4G31340.2);
Has 425 Blast hits to 402 proteins in 77 species: Archae -
4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98;
Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).		 0.7 0.32 -0.3
10 AT1G07170 PHF5-like protein 0.69 0.31 -0.3
11 AT2G37120 S1FA-like DNA-binding protein 0.69 0.3 -0.34
12 AT4G22720 Actin-like ATPase superfamily protein 0.69 0.31 -0.3
13 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 -0.69 0.31 -0.3
14 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.66 0.32 -0.32
15 AT3G26730 RING/U-box superfamily protein -0.66 0.32 -0.33
16 AT1G74030 enolase 1 enolase 1 0.66 0.33 -0.31
17 AT4G00231 ARM repeat superfamily protein maternal effect embryo arrest 50 0.65 0.31 -0.33
18 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein
L7/L12, C-terminal/adaptor protein ClpS-like		 0.65 0.33 -0.28
19 AT1G07830 ribosomal protein L29 family protein 0.65 0.3 -0.34
20 AT5G37055 HIT-type Zinc finger family protein ATSWC6, SERRATED LEAVES AND EARLY
FLOWERING		 0.65 0.33 -0.31
21 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 0.65 0.28 -0.32
22 AT2G29330 tropinone reductase tropinone reductase 0.64 0.31 -0.32
23 AT1G30130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1365
(InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins
in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0;
Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920
(source: NCBI BLink).		 0.64 0.32 -0.31
24 AT5G02620 ankyrin-like1 ankyrin-like1, ATANK1 -0.64 0.31 -0.31
25 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 -0.63 0.33 -0.33
26 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A 0.63 0.31 -0.31
27 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 -0.62 0.32 -0.32
28 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.62 0.31 -0.31
29 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.62 0.32 -0.29
30 AT5G55140 ribosomal protein L30 family protein 0.62 0.32 -0.33
31 AT2G34900 Transcription factor GTE6 GTE01, GLOBAL TRANSCRIPTION FACTOR
GROUP E1, IMBIBITION-INDUCIBLE 1		 0.61 0.31 -0.33
32 AT1G14040 EXS (ERD1/XPR1/SYG1) family protein 0.61 0.29 -0.33
33 AT3G15350 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.31 -0.28
34 AT1G48690 Auxin-responsive GH3 family protein 0.61 0.3 -0.35
35 AT1G30650 WRKY DNA-binding protein 14 AR411, WRKY DNA-BINDING PROTEIN
14, WRKY DNA-binding protein 14		 0.61 0.32 -0.29
36 AT5G59440 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARABIDOPSIS THALIANA THYMIDYLATE
KINASE.1, ARABIDOPSIS THALIANA
THYMIDYLATE KINASE.2, ZEUS1		 0.61 0.32 -0.32
37 AT5G14800 pyrroline-5- carboxylate (P5C) reductase AT-P5C1, PYRROLINE-5- CARBOXYLATE
(P5C) REDUCTASE, EMBRYO DEFECTIVE
2772, pyrroline-5- carboxylate
(P5C) reductase		 0.61 0.34 -0.31
38 AT1G13670 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.32 -0.33
39 AT3G04030 Homeodomain-like superfamily protein -0.6 0.34 -0.34
40 AT2G04800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl, root;
Has 4 Blast hits to 4 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.3
41 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 0.6 0.32 -0.31
42 AT3G22680 RNA-DIRECTED DNA METHYLATION 1 RNA-DIRECTED DNA METHYLATION 1 0.6 0.29 -0.29
43 AT1G20430 unknown protein; Has 29 Blast hits to 29 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.3 -0.32
44 AT3G11670 UDP-Glycosyltransferase superfamily protein DIGALACTOSYL DIACYLGLYCEROL
DEFICIENT 1		 -0.58 0.3 -0.32
45 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.58 0.33 -0.32
46 AT2G35000 RING/U-box superfamily protein Arabidopsis toxicos en levadura 9 0.58 0.31 -0.3
47 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.31 -0.33
48 AT3G25150 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.57 0.31 -0.31
49 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 -0.57 0.33 -0.3
50 AT4G31430 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.57 0.31 -0.32
51 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.57 0.34 -0.33
52 AT3G12090 tetraspanin6 tetraspanin6 0.57 0.29 -0.32
53 AT1G51730 Ubiquitin-conjugating enzyme family protein 0.57 0.31 -0.32
54 AT1G27920 microtubule-associated protein 65-8 microtubule-associated protein
65-8		 -0.56 0.3 -0.33
55 AT2G28810 Dof-type zinc finger DNA-binding family protein -0.56 0.31 -0.33
56 AT1G74680 Exostosin family protein -0.56 0.29 -0.32
57 AT5G22760 PHD finger family protein -0.56 0.3 -0.31
58 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.56 0.32 -0.31
59 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.55 0.32 -0.32
60 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.55 0.31 -0.3
61 AT1G17110 ubiquitin-specific protease 15 ubiquitin-specific protease 15 -0.55 0.33 -0.33
62 AT1G76580 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 -0.55 0.3 -0.32
63 AT3G13810 indeterminate(ID)-domain 11 indeterminate(ID)-domain 11,
indeterminate(ID)-domain 11		 -0.55 0.32 -0.31
64 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.55 0.33 -0.34
65 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 -0.55 0.34 -0.31
66 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.55 0.36 -0.36
67 AT1G26130 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.55 0.36 -0.3
68 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha -0.55 0.31 -0.33
69 AT3G13280 Putative endonuclease or glycosyl hydrolase -0.53 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0117 Hydroxyproline (2S,4R)-Hydroxyproline 4-Hydroxy-L-proline protein precursor -0.6 0.44 -0.45 C0117