AGICode | AT5G39640 |
Description | Putative endonuclease or glycosyl hydrolase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G39640 | Putative endonuclease or glycosyl hydrolase | 1 | 0.3 | -0.3 | |||
2 | AT5G23770 | DOMAIN OF UNKNOWN FUNCTION 724 8 | DOMAIN OF UNKNOWN FUNCTION 724 8, DOMAIN OF UNKNOWN FUNCTION 724 8 |
0.73 | 0.32 | -0.32 | ||
3 | AT2G15700 | transposable element gene | 0.72 | 0.34 | -0.31 | |||
4 | AT4G14530 | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97 (TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.31 | -0.32 | |||
5 | AT5G59340 | WUSCHEL related homeobox 2 | WUSCHEL related homeobox 2 | 0.71 | 0.32 | -0.33 | ||
6 | AT5G24560 | phloem protein 2-B12 | phloem protein 2-B12, phloem protein 2-B12 |
0.7 | 0.31 | -0.33 | ||
7 | AT5G20690 | Leucine-rich repeat protein kinase family protein | 0.69 | 0.34 | -0.31 | |||
8 | AT2G14835 | RING/U-box superfamily protein | -0.67 | 0.32 | -0.32 | |||
9 | AT4G37840 | hexokinase-like 3 | hexokinase-like 3 | 0.67 | 0.33 | -0.31 | ||
10 | AT3G51200 | SAUR-like auxin-responsive protein family | 0.67 | 0.31 | -0.31 | |||
11 | AT2G34370 | Pentatricopeptide repeat (PPR) superfamily protein | 0.67 | 0.31 | -0.32 | |||
12 | AT5G54430 | Adenine nucleotide alpha hydrolases-like superfamily protein |
ATPHOS32, PHOS32 | -0.67 | 0.33 | -0.31 | ||
13 | AT5G27190 | transposable element gene | 0.67 | 0.34 | -0.3 | |||
14 | AT5G21010 | BTB-POZ and MATH domain 5 | BTB-POZ AND MATH DOMAIN 5, BTB-POZ and MATH domain 5 |
-0.66 | 0.29 | -0.33 | ||
15 | AT2G38830 | Ubiquitin-conjugating enzyme/RWD-like protein | -0.66 | 0.34 | -0.31 | |||
16 | AT3G23930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). |
0.65 | 0.3 | -0.31 | |||
17 | AT4G12110 | sterol-4alpha-methyl oxidase 1-1 | ATSMO1-1, sterol-4alpha-methyl oxidase 1-1 |
-0.65 | 0.32 | -0.31 | ||
18 | AT5G28620 | protein kinase C-related | -0.65 | 0.32 | -0.31 | |||
19 | AT1G74580 | Pentatricopeptide repeat (PPR) superfamily protein | 0.65 | 0.35 | -0.29 | |||
20 | AT3G30570 | transposable element gene | 0.65 | 0.32 | -0.3 | |||
21 | AT2G03410 | Mo25 family protein | -0.64 | 0.31 | -0.31 | |||
22 | AT2G14040 | transposable element gene | 0.64 | 0.33 | -0.3 | |||
23 | AT1G52470 | alpha/beta-Hydrolases superfamily protein | -0.63 | 0.32 | -0.34 | |||
24 | AT3G04970 | DHHC-type zinc finger family protein | -0.63 | 0.3 | -0.31 | |||
25 | AT1G53840 | pectin methylesterase 1 | pectin methylesterase 1, pectin methylesterase 1 |
-0.63 | 0.31 | -0.33 | ||
26 | AT5G58180 | Synaptobrevin family protein | ATYKT62, YKT62 | -0.63 | 0.33 | -0.33 | ||
27 | AT3G49480 | Protein with RNI-like/FBD-like domains | -0.63 | 0.32 | -0.33 | |||
28 | AT1G51990 | O-methyltransferase family protein | 0.63 | 0.32 | -0.31 | |||
29 | AT2G19250 | pseudogene, similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco), similar to SP|O24133 Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) {Nicotiana tabacum}; blastp match of 78% identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco) {Nicotiana tabacum} |
0.63 | 0.3 | -0.3 | |||
30 | AT1G07460 | Concanavalin A-like lectin family protein | -0.62 | 0.31 | -0.32 | |||
31 | AT2G33240 | myosin XI D | MYOSIN XI D, myosin XI D | -0.62 | 0.33 | -0.33 | ||
32 | AT1G47380 | Protein phosphatase 2C family protein | -0.62 | 0.32 | -0.33 | |||
33 | AT5G15490 | UDP-glucose 6-dehydrogenase family protein | UDP-glucose dehydrogenase 3 | -0.62 | 0.31 | -0.32 | ||
34 | AT2G47970 | Nuclear pore localisation protein NPL4 | -0.62 | 0.33 | -0.31 | |||
35 | AT4G37780 | myb domain protein 87 | ATMYB87, myb domain protein 87 | -0.62 | 0.3 | -0.32 | ||
36 | AT1G66960 | Terpenoid cyclases family protein | LUP5 | 0.61 | 0.32 | -0.29 | ||
37 | AT3G44440 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
38 | AT3G24480 | Leucine-rich repeat (LRR) family protein | 0.61 | 0.32 | -0.3 | |||
39 | AT3G54320 | Integrase-type DNA-binding superfamily protein | ACTIVATOR OF SPO(MIN)::LUC1, ATWRI1, WRINKLED, WRINKLED 1 |
0.61 | 0.33 | -0.31 | ||
40 | AT1G49160 | Protein kinase superfamily protein | WNK7 | 0.61 | 0.33 | -0.33 | ||
41 | AT5G39440 | SNF1-related protein kinase 1.3 | SNF1-related protein kinase 1.3 | 0.61 | 0.32 | -0.32 | ||
42 | AT5G51260 | HAD superfamily, subfamily IIIB acid phosphatase | -0.61 | 0.32 | -0.32 | |||
43 | AT2G01410 | NHL domain-containing protein | -0.6 | 0.3 | -0.34 | |||
44 | AT4G19940 | F-box and associated interaction domains-containing protein | 0.6 | 0.34 | -0.3 | |||
45 | AT4G17710 | homeodomain GLABROUS 4 | homeodomain GLABROUS 4 | 0.6 | 0.35 | -0.32 | ||
46 | AT2G25360 | RING/U-box superfamily protein | 0.6 | 0.31 | -0.3 | |||
47 | AT5G25880 | NADP-malic enzyme 3 | Arabidopsis thaliana NADP-malic enzyme 3, NADP-malic enzyme 3 |
-0.6 | 0.33 | -0.32 | ||
48 | AT4G35510 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits to 179 proteins in 73 species: Archae - 0; Bacteria - 87; Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
-0.6 | 0.32 | -0.32 | |||
49 | AT2G22520 | unknown protein; Has 186 Blast hits to 37 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). |
-0.6 | 0.33 | -0.31 | |||
50 | AT5G12260 | BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
51 | AT3G22990 | ARM repeat superfamily protein | LEAF AND FLOWER RELATED | -0.6 | 0.31 | -0.31 | ||
52 | AT4G14900 | FRIGIDA-like protein | -0.59 | 0.32 | -0.31 | |||
53 | AT1G64410 | transposable element gene | 0.59 | 0.3 | -0.32 | |||
54 | AT1G34140 | poly(A) binding protein 1 | poly(A) binding protein 1 | 0.59 | 0.33 | -0.3 | ||
55 | AT1G26610 | C2H2-like zinc finger protein | 0.59 | 0.29 | -0.33 | |||
56 | AT2G07728 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.32 | -0.32 | |||
57 | AT5G17190 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.59 | 0.34 | -0.3 | |||
58 | AT1G48270 | G-protein-coupled receptor 1 | G-protein-coupled receptor 1 | -0.58 | 0.32 | -0.32 | ||
59 | AT3G44270 | transposable element gene | -0.58 | 0.3 | -0.3 | |||
60 | AT4G25540 | homolog of DNA mismatch repair protein MSH3 | ATMSH3, homolog of DNA mismatch repair protein MSH3 |
0.58 | 0.31 | -0.31 | ||
61 | AT4G07380 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.58 | 0.31 | -0.28 | |||
62 | AT4G11490 | cysteine-rich RLK (RECEPTOR-like protein kinase) 33 | cysteine-rich RLK (RECEPTOR-like protein kinase) 33 |
0.58 | 0.31 | -0.34 | ||
63 | AT5G37780 | calmodulin 1 | ACAM-1, calmodulin 1, TOUCH 1 | -0.58 | 0.3 | -0.31 | ||
64 | AT4G14180 | putative recombination initiation defect 1 | putative recombination initiation defect 1, putative recombination initiation defect 1 |
0.58 | 0.33 | -0.29 | ||
65 | AT2G18350 | homeobox protein 24 | homeobox protein 24, homeobox protein 24, ZINC FINGER HOMEODOMAIN 6 |
-0.58 | 0.32 | -0.32 | ||
66 | AT1G78300 | general regulatory factor 2 | 14-3-3 PROTEIN G-BOX FACTOR14 OMEGA, GF14 OMEGA, general regulatory factor 2 |
-0.58 | 0.31 | -0.3 | ||
67 | AT2G21060 | glycine-rich protein 2B | COLD SHOCK DOMAIN PROTEIN 4, glycine-rich protein 2B, glycine-rich protein 2B |
-0.58 | 0.31 | -0.3 | ||
68 | AT1G75730 | unknown protein; Has 327 Blast hits to 272 proteins in 89 species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi - 14; Plants - 20; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). |
0.58 | 0.31 | -0.31 | |||
69 | AT1G31000 | F-box and associated interaction domains-containing protein | 0.58 | 0.33 | -0.33 | |||
70 | AT4G10750 | Phosphoenolpyruvate carboxylase family protein | -0.58 | 0.32 | -0.32 | |||
71 | AT5G05950 | maternal effect embryo arrest 60 | maternal effect embryo arrest 60 | -0.58 | 0.31 | -0.34 | ||
72 | AT2G26450 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.57 | 0.33 | -0.33 | |||
73 | AT3G17280 | F-box and associated interaction domains-containing protein | 0.57 | 0.33 | -0.31 | |||
74 | AT3G11380 | Pentatricopeptide repeat (PPR) superfamily protein | 0.57 | 0.32 | -0.31 | |||
75 | AT5G24440 | CTC-interacting domain 13 | CTC-interacting domain 13 | 0.57 | 0.29 | -0.34 | ||
76 | AT5G18910 | Protein kinase superfamily protein | 0.57 | 0.35 | -0.31 | |||
77 | AT3G11870 | Endoribonuclease/protein kinase IRE1-like | 0.57 | 0.32 | -0.32 | |||
78 | AT5G08090 | unknown protein; Has 13 Blast hits to 13 proteins in 8 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.32 | -0.33 | |||
79 | AT5G01380 | Homeodomain-like superfamily protein | -0.57 | 0.29 | -0.3 | |||
80 | AT5G01480 | Cysteine/Histidine-rich C1 domain family protein | 0.57 | 0.3 | -0.33 | |||
81 | ATMG00720 | hypothetical protein | ORF107D | 0.57 | 0.32 | -0.32 | ||
82 | AT4G05000 | Vacuolar protein sorting-associated protein VPS28 family protein |
vacuolar protein sorting-associated protein 28 homolog 1, VPS28-2 |
-0.57 | 0.31 | -0.33 | ||
83 | AT5G11280 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.33 | -0.34 | |||
84 | AT3G44830 | Lecithin:cholesterol acyltransferase family protein | -0.57 | 0.33 | -0.32 | |||
85 | AT3G60600 | vesicle associated protein | (AT)VAP, vesicle associated protein, VAP27, VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 |
-0.57 | 0.31 | -0.31 | ||
86 | AT1G63020 | nuclear RNA polymerase D1A | NRPD1, nuclear RNA polymerase D1A, NUCLEAR RNA POLYMERASE D 1A, SDE4, SILENCING MOVEMENT DEFICIENT 2 |
-0.56 | 0.31 | -0.33 | ||
87 | AT5G63260 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.56 | 0.32 | -0.33 | |||
88 | AT3G14430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.34 | -0.34 | |||
89 | AT1G51160 | SNARE-like superfamily protein | -0.55 | 0.31 | -0.31 | |||
90 | AT1G47250 | 20S proteasome alpha subunit F2 | 20S proteasome alpha subunit F2 | -0.55 | 0.33 | -0.31 | ||
91 | AT5G51270 | U-box domain-containing protein kinase family protein | -0.55 | 0.32 | -0.32 | |||
92 | AT5G35430 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.32 | -0.33 | |||
93 | AT5G26270 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.55 | 0.33 | -0.33 |