AT5G38840 : -
Query Information
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AGICode AT5G38840
Description SMAD/FHA domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G38840 SMAD/FHA domain-containing protein 1 0.32 -0.3
2 AT1G21660 Chaperone DnaJ-domain superfamily protein 0.74 0.32 -0.31
3 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 0.71 0.32 -0.31
4 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 0.7 0.31 -0.33
5 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 0.68 0.33 -0.31
6 AT1G31870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol, nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2050,
pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303
Blast hits to 9618 proteins in 489 species: Archae - 8;
Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942;
Viruses - 128; Other Eukaryotes - 2334 (source: NCBI
BLink).		 0.68 0.31 -0.32
7 AT3G10650 BEST Arabidopsis thaliana protein match is:
nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast
hits to 31782 proteins in 2093 species: Archae - 202;
Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants -
1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI
BLink).		 AtNUP1, NUP1 0.68 0.3 -0.32
8 AT3G57890 Tubulin binding cofactor C domain-containing protein 0.68 0.3 -0.32
9 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.34 -0.31
10 AT2G27285 Coiled-coil domain-containing protein 55 (DUF2040) 0.66 0.34 -0.3
11 AT4G02610 Aldolase-type TIM barrel family protein -0.66 0.33 -0.33
12 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 -0.66 0.3 -0.31
13 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.31 -0.33
14 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.29
15 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 -0.66 0.3 -0.31
16 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.65 0.33 -0.34
17 AT1G21630 Calcium-binding EF hand family protein 0.65 0.31 -0.33
18 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.32 -0.34
19 AT3G58050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast
hits to 8116 proteins in 546 species: Archae - 41; Bacteria
- 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses
- 46; Other Eukaryotes - 4915 (source: NCBI BLink).		 0.65 0.33 -0.3
20 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 0.65 0.32 -0.31
21 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.64 0.3 -0.32
22 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.64 0.32 -0.32
23 AT3G15430 Regulator of chromosome condensation (RCC1) family protein 0.64 0.33 -0.29
24 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6		 0.64 0.31 -0.32
25 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.64 0.31 -0.32
26 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 0.64 0.31 -0.33
27 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 0.64 0.31 -0.32
28 AT3G23900 RNA recognition motif (RRM)-containing protein 0.63 0.31 -0.31
29 AT1G10090 Early-responsive to dehydration stress protein (ERD4) 0.63 0.33 -0.32
30 AT4G23410 tetraspanin5 tetraspanin5 -0.63 0.31 -0.31
31 AT5G06970 Protein of unknown function (DUF810) 0.63 0.33 -0.32
32 AT2G29080 FTSH protease 3 FTSH protease 3 0.62 0.34 -0.32
33 AT2G07360 SH3 domain-containing protein 0.62 0.31 -0.31
34 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 -0.62 0.32 -0.3
35 AT5G64270 splicing factor, putative 0.62 0.29 -0.33
36 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.62 0.31 -0.31
37 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.62 0.3 -0.33
38 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein 0.61 0.33 -0.32
39 AT5G23720 dual specificity protein phosphatase family protein PROPYZAMIDE-HYPERSENSITIVE 1 0.61 0.33 -0.31
40 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.61 0.32 -0.32
41 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.6 0.31 -0.31
42 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 0.6 0.32 -0.34
43 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.6 0.29 -0.3
44 AT1G75600 Histone superfamily protein -0.6 0.3 -0.33
45 AT1G15010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits
to 71 proteins in 13 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.31
46 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.3 -0.34
47 AT3G26400 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation
factor 4B1		 0.6 0.31 -0.32
48 AT4G20300 Protein of unknown function (DUF1639) 0.6 0.32 -0.32
49 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.59 0.3 -0.32
50 AT1G14910 ENTH/ANTH/VHS superfamily protein 0.59 0.31 -0.29
51 AT3G06940 transposable element gene 0.59 0.32 -0.32
52 AT1G72740 Homeodomain-like/winged-helix DNA-binding family protein -0.59 0.31 -0.33
53 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.33 -0.31
54 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 -0.59 0.32 -0.32
55 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.59 0.32 -0.32
56 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.58 0.32 -0.3
57 AT1G23860 RS-containing zinc finger protein 21 RS-containing zinc finger protein
21, RS-containing zinc finger
protein 21, RS-containing zinc
finger protein 21, SRZ-21, SRZ21		 -0.58 0.32 -0.31
58 AT5G47580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 ALTERED SEED GERMINATION 7 0.58 0.33 -0.3
59 AT5G54480 Protein of unknown function (DUF630 and DUF632) 0.58 0.31 -0.3
60 AT3G58580 DNAse I-like superfamily protein 0.58 0.33 -0.31
61 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 0.58 0.33 -0.31
62 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 0.57 0.32 -0.3
63 AT2G16860 GCIP-interacting family protein 0.57 0.34 -0.3
64 AT3G44680 histone deacetylase 9 HDA09, histone deacetylase 9 0.57 0.3 -0.33
65 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.57 0.3 -0.34
66 AT5G61600 ethylene response factor 104 ethylene response factor 104 -0.57 0.33 -0.33
67 AT5G27610 DIRP ;Myb-like DNA-binding domain ALWAYS EARLY 1, ARABIDOPSIS
THALIANA ALWAYS EARLY 1		 0.57 0.31 -0.32
68 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.3 -0.32
69 AT5G51300 splicing factor-related 0.57 0.29 -0.33
70 AT4G18840 Pentatricopeptide repeat (PPR-like) superfamily protein 0.56 0.32 -0.31
71 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.56 0.32 -0.31
72 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.56 0.31 -0.32
73 AT2G28390 SAND family protein 0.55 0.33 -0.31
74 AT1G16690 Enhancer of polycomb-like transcription factor protein 0.55 0.34 -0.3
75 AT4G00350 MATE efflux family protein -0.55 0.31 -0.3
76 AT1G20760 Calcium-binding EF hand family protein 0.55 0.33 -0.31
77 AT2G26170 cytochrome P450, family 711, subfamily A, polypeptide 1 cytochrome P450, family 711,
subfamily A, polypeptide 1, MORE
AXILLARY BRANCHES 1		 -0.54 0.34 -0.28
78 AT5G47230 ethylene responsive element binding factor 5 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR- 5, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
5, ethylene responsive element
binding factor 5		 -0.54 0.32 -0.34
79 AT1G71180 6-phosphogluconate dehydrogenase family protein -0.54 0.32 -0.32
80 AT1G34770 CONTAINS InterPro DOMAIN/s: MAGE protein
(InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins
in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104;
Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76
(source: NCBI BLink).		 -0.54 0.32 -0.33
81 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.52 0.31 -0.3
82 AT1G22190 Integrase-type DNA-binding superfamily protein related to AP2 4 -0.52 0.34 -0.31
83 AT5G51190 Integrase-type DNA-binding superfamily protein -0.52 0.32 -0.3
84 AT1G77700 Pathogenesis-related thaumatin superfamily protein -0.51 0.33 -0.31
85 AT5G51580 unknown protein; Has 8 Blast hits to 6 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 -0.51 0.31 -0.33
86 AT3G15420 Transcription factor TFIIIC, tau55-related protein -0.51 0.33 -0.29
87 AT3G28400 transposable element gene -0.51 0.32 -0.32
88 AT4G24210 F-box family protein SLEEPY1 -0.5 0.33 -0.3