AT5G38290 : -
Query Information
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AGICode AT5G38290
Description Peptidyl-tRNA hydrolase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G38290 Peptidyl-tRNA hydrolase family protein 1 0.31 -0.33
2 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.94 0.3 -0.29
3 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.93 0.34 -0.3
4 AT4G37510 Ribonuclease III family protein 0.93 0.35 -0.34
5 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.93 0.3 -0.3
6 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.92 0.29 -0.31
7 AT5G65220 Ribosomal L29 family protein 0.92 0.31 -0.31
8 AT5G47190 Ribosomal protein L19 family protein 0.92 0.32 -0.3
9 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.92 0.32 -0.31
10 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.92 0.33 -0.33
11 AT2G39670 Radical SAM superfamily protein 0.92 0.33 -0.3
12 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.92 0.33 -0.3
13 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.91 0.31 -0.32
14 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.91 0.33 -0.32
15 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.91 0.32 -0.31
16 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.91 0.3 -0.3
17 AT3G12930 Lojap-related protein 0.91 0.32 -0.32
18 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.91 0.31 -0.31
19 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.91 0.33 -0.32
20 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.91 0.33 -0.32
21 AT1G11430 plastid developmental protein DAG, putative 0.9 0.34 -0.32
22 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.31 -0.34
23 AT4G26370 antitermination NusB domain-containing protein 0.9 0.32 -0.32
24 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.9 0.32 -0.3
25 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.9 0.32 -0.33
26 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.9 0.31 -0.3
27 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.9 0.31 -0.31
28 AT5G55220 trigger factor type chaperone family protein 0.9 0.32 -0.31
29 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.9 0.31 -0.31
30 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.9 0.32 -0.31
31 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.9 0.3 -0.34
32 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.9 0.32 -0.31
33 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.9 0.32 -0.28
34 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.9 0.32 -0.32
35 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.9 0.3 -0.33
36 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.9 0.31 -0.31
37 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.9 0.29 -0.32
38 AT3G29185 Domain of unknown function (DUF3598) 0.89 0.29 -0.31
39 AT3G54210 Ribosomal protein L17 family protein 0.89 0.32 -0.28
40 AT4G34290 SWIB/MDM2 domain superfamily protein 0.89 0.32 -0.32
41 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.31 -0.3
42 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.89 0.32 -0.31
43 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.89 0.31 -0.34
44 AT5G66530 Galactose mutarotase-like superfamily protein 0.89 0.31 -0.31
45 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.89 0.31 -0.3
46 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.89 0.36 -0.31
47 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.89 0.31 -0.33
48 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.89 0.32 -0.31
49 AT2G33450 Ribosomal L28 family 0.89 0.3 -0.31
50 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.89 0.29 -0.3
51 AT1G14270 CAAX amino terminal protease family protein 0.89 0.3 -0.31
52 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.31 -0.31
53 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.89 0.32 -0.31
54 AT2G18710 SECY homolog 1 SECY homolog 1 0.89 0.29 -0.33
55 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.89 0.33 -0.31
56 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.89 0.31 -0.32
57 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.34 -0.32
58 AT1G06190 Rho termination factor 0.88 0.29 -0.31
59 AT4G17560 Ribosomal protein L19 family protein 0.88 0.33 -0.31
60 AT1G76450 Photosystem II reaction center PsbP family protein 0.88 0.31 -0.31
61 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.88 0.33 -0.3
62 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.88 0.31 -0.3
63 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.88 0.33 -0.32
64 AT3G07670 Rubisco methyltransferase family protein 0.88 0.32 -0.33
65 AT4G18370 DEGP protease 5 DEGP protease 5, DEGP PROTEASE 5,
PROTEASE HHOA PRECUSOR		 0.88 0.34 -0.31
66 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.88 0.29 -0.33
67 AT4G27600 pfkB-like carbohydrate kinase family protein GENES NECESSARY FOR THE
ACHIEVEMENT OF RUBISCO
ACCUMULATION 5		 0.88 0.32 -0.31
68 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.29 -0.31
69 AT3G62060 Pectinacetylesterase family protein 0.88 0.31 -0.31
70 AT1G11850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to
8185 proteins in 741 species: Archae - 46; Bacteria -
14846; Metazoa - 13013; Fungi - 1392; Plants - 5894;
Viruses - 543; Other Eukaryotes - 3043 (source: NCBI
BLink).		 0.88 0.33 -0.32
71 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.88 0.31 -0.33
72 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.88 0.3 -0.3
73 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.88 0.31 -0.32
74 AT1G60230 Radical SAM superfamily protein 0.88 0.29 -0.34
75 AT2G24060 Translation initiation factor 3 protein 0.88 0.32 -0.31
76 AT2G43030 Ribosomal protein L3 family protein 0.88 0.3 -0.31
77 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.88 0.31 -0.31
78 AT2G24090 Ribosomal protein L35 0.88 0.33 -0.31
79 AT4G15510 Photosystem II reaction center PsbP family protein 0.88 0.32 -0.34
80 AT3G51140 Protein of unknown function (DUF3353) 0.88 0.3 -0.28
81 AT1G10522 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 24 Blast hits to 24 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.87 0.31 -0.32
82 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.87 0.33 -0.3
83 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.87 0.3 -0.31
84 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.87 0.3 -0.34
85 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.31 -0.32
86 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.87 0.3 -0.3
87 AT5G20040 isopentenyltransferase 9 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 9,
isopentenyltransferase 9		 0.87 0.32 -0.33
88 AT2G22230 Thioesterase superfamily protein 0.87 0.32 -0.31
89 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.3 -0.3
90 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.87 0.33 -0.33
91 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.87 0.33 -0.33
92 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.87 0.31 -0.31
93 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.3 -0.3
94 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.87 0.31 -0.32
95 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.87 0.33 -0.33
96 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.85 0.32 -0.33
97 AT1G63840 RING/U-box superfamily protein -0.83 0.3 -0.32
98 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 -0.82 0.34 -0.3
99 AT5G63970 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.82 0.3 -0.31
100 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.82 0.33 -0.32
101 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.81 0.33 -0.33
102 AT4G18360 Aldolase-type TIM barrel family protein -0.81 0.32 -0.29
103 AT5G49280 hydroxyproline-rich glycoprotein family protein -0.79 0.31 -0.32
104 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.78 0.34 -0.33
105 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.78 0.3 -0.33
106 AT2G48010 receptor-like kinase in in flowers 3 receptor-like kinase in in flowers
3		 -0.78 0.31 -0.34
107 AT3G23560 MATE efflux family protein ABERRANT LATERAL ROOT FORMATION 5 -0.77 0.3 -0.32
108 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 -0.77 0.32 -0.31
109 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.77 0.32 -0.3
110 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 -0.76 0.3 -0.3
111 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.75 0.32 -0.31
112 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.75 0.3 -0.32
113 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein -0.75 0.32 -0.34
114 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.75 0.31 -0.3
115 AT5G24090 chitinase A chitinase A, chitinase A -0.75 0.31 -0.3
116 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 -0.75 0.3 -0.33
117 AT5G37540 Eukaryotic aspartyl protease family protein -0.75 0.3 -0.32
118 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.74 0.31 -0.33
119 AT5G24290 Vacuolar iron transporter (VIT) family protein -0.74 0.32 -0.3
120 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.74 0.31 -0.33
121 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.31 -0.31
122 AT1G54115 cation calcium exchanger 4 CATION CALCIUM EXCHANGER 4, cation
calcium exchanger 4		 -0.74 0.31 -0.31
123 AT5G09980 elicitor peptide 4 precursor elicitor peptide 4 precursor -0.74 0.33 -0.32
124 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.74 0.31 -0.32
125 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.73 0.3 -0.32
126 AT3G20660 organic cation/carnitine transporter4 organic cation/carnitine
transporter4, organic
cation/carnitine transporter4		 -0.73 0.31 -0.32
127 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.73 0.34 -0.31
128 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 -0.72 0.3 -0.33
129 AT3G21770 Peroxidase superfamily protein -0.72 0.31 -0.33
130 AT4G09030 arabinogalactan protein 10 arabinogalactan protein 10,
ATAGP10		 -0.72 0.34 -0.29
131 AT5G24600 Protein of unknown function, DUF599 -0.72 0.32 -0.32
132 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.72 0.3 -0.31
133 AT5G67340 ARM repeat superfamily protein -0.71 0.31 -0.3
134 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.71 0.3 -0.3
135 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.71 0.3 -0.32
136 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.71 0.31 -0.32