AGICode | AT5G38080 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G38080 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
1 | 0.33 | -0.31 | |||
2 | AT5G14430 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.67 | 0.29 | -0.32 | |||
3 | AT1G10520 | DNA polymerase lambda (POLL) | AtPol{lambda}, DNA polymerase {lambda} |
-0.66 | 0.3 | -0.3 | ||
4 | AT3G26330 | cytochrome P450, family 71, subfamily B, polypeptide 37 | cytochrome P450, family 71, subfamily B, polypeptide 37 |
0.63 | 0.33 | -0.29 | ||
5 | AT3G42970 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.32 | |||
6 | AT1G12720 | transposable element gene | 0.59 | 0.34 | -0.3 | |||
7 | AT1G56360 | purple acid phosphatase 6 | ATPAP6, purple acid phosphatase 6 | 0.58 | 0.31 | -0.32 | ||
8 | AT3G28720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). |
0.58 | 0.3 | -0.31 | |||
9 | AT5G18690 | arabinogalactan protein 25 | arabinogalactan protein 25, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25 |
-0.57 | 0.34 | -0.32 | ||
10 | AT1G64780 | ammonium transporter 1;2 | ammonium transporter 1;2, ammonium transporter 1;2 |
0.57 | 0.3 | -0.35 | ||
11 | AT1G35570 | transposable element gene | 0.57 | 0.31 | -0.34 | |||
12 | AT3G58620 | tetratricopetide-repeat thioredoxin-like 4 | tetratricopetide-repeat thioredoxin-like 4 |
-0.56 | 0.32 | -0.34 | ||
13 | AT1G29860 | WRKY DNA-binding protein 71 | WRKY DNA-BINDING PROTEIN 71, WRKY DNA-binding protein 71 |
-0.56 | 0.32 | -0.32 | ||
14 | AT5G27630 | acyl-CoA binding protein 5 | acyl-CoA binding protein 5 | 0.56 | 0.33 | -0.32 | ||
15 | AT5G06190 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.56 | 0.3 | -0.32 | |||
16 | ATMG00450 | hypothetical protein | ORF106B | -0.55 | 0.3 | -0.31 | ||
17 | AT2G45520 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). |
-0.54 | 0.3 | -0.29 | |||
18 | AT1G67370 | DNA-binding HORMA family protein | ASYNAPTIC 1, ATASY1 | -0.54 | 0.3 | -0.31 | ||
19 | AT1G33990 | methyl esterase 14 | METHYL ESTERASE 14, methyl esterase 14 |
-0.54 | 0.31 | -0.32 | ||
20 | AT4G38640 | Plasma-membrane choline transporter family protein | 0.54 | 0.32 | -0.3 | |||
21 | AT2G16600 | rotamase CYP 3 | rotamase CYP 3 | -0.54 | 0.33 | -0.29 | ||
22 | AT5G46910 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
0.54 | 0.33 | -0.32 | |||
23 | AT4G09510 | cytosolic invertase 2 | alkaline/neutral invertase I, cytosolic invertase 2 |
0.53 | 0.29 | -0.32 | ||
24 | AT3G57220 | Glycosyl transferase family 4 protein | 0.53 | 0.34 | -0.33 | |||
25 | AT2G03520 | ureide permease 4 | ureide permease 4, ureide permease 4 |
0.52 | 0.3 | -0.32 | ||
26 | AT5G63850 | amino acid permease 4 | amino acid permease 4 | 0.52 | 0.33 | -0.33 | ||
27 | AT4G37230 | Photosystem II manganese-stabilising protein (PsbO) family | 0.52 | 0.31 | -0.3 | |||
28 | AT5G59810 | Subtilase family protein | ATSBT5.4, SBT5.4 | -0.52 | 0.32 | -0.32 | ||
29 | AT1G59530 | basic leucine-zipper 4 | basic leucine-zipper 4, basic leucine-zipper 4 |
0.52 | 0.29 | -0.31 | ||
30 | AT5G44470 | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G23320.1); Has 74 Blast hits to 74 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.31 | -0.3 | |||
31 | AT1G06340 | Plant Tudor-like protein | 0.51 | 0.29 | -0.29 | |||
32 | AT1G14340 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.51 | 0.3 | -0.32 | |||
33 | AT5G44910 | Toll-Interleukin-Resistance (TIR) domain family protein | -0.51 | 0.3 | -0.3 | |||
34 | AT5G63760 | RING/U-box superfamily protein | ARIADNE 15, ARABIDOPSIS ARIADNE 15 | -0.51 | 0.34 | -0.31 | ||
35 | AT5G44580 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44582.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.5 | 0.33 | -0.32 | |||
36 | AT4G30200 | vernalization5/VIN3-like | vernalization5/VIN3-like 1, VIN3-Like 2 |
0.5 | 0.34 | -0.31 | ||
37 | AT1G70520 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 | ALTERED SEED GERMINATION 6, cysteine-rich RLK (RECEPTOR-like protein kinase) 2 |
-0.5 | 0.3 | -0.3 | ||
38 | AT4G28130 | diacylglycerol kinase 6 | ATDGK6, diacylglycerol kinase 6 | 0.49 | 0.32 | -0.3 | ||
39 | AT5G41680 | Protein kinase superfamily protein | -0.49 | 0.32 | -0.34 | |||
40 | AT2G27270 | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G01410.1); Has 250 Blast hits to 250 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.49 | 0.29 | -0.31 | |||
41 | AT5G40290 | HD domain-containing metal-dependent phosphohydrolase family protein |
-0.48 | 0.33 | -0.3 | |||
42 | AT2G01440 | DEAD/DEAH box RNA helicase family protein | 0.48 | 0.3 | -0.32 | |||
43 | AT1G34842 | transposable element gene | 0.48 | 0.31 | -0.33 | |||
44 | AT5G39590 | TLD-domain containing nucleolar protein | -0.48 | 0.33 | -0.3 | |||
45 | AT4G12330 | cytochrome P450, family 706, subfamily A, polypeptide 7 | cytochrome P450, family 706, subfamily A, polypeptide 7 |
-0.48 | 0.31 | -0.31 | ||
46 | AT5G17950 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.47 | 0.32 | -0.32 | |||
47 | AT5G55020 | myb domain protein 120 | ATMYB120, myb domain protein 120 | 0.47 | 0.33 | -0.29 | ||
48 | AT1G23990 | transposable element gene | -0.47 | 0.34 | -0.3 | |||
49 | AT1G08860 | Calcium-dependent phospholipid-binding Copine family protein |
BONZAI 3 | 0.47 | 0.32 | -0.34 | ||
50 | AT3G10330 | Cyclin-like family protein | -0.47 | 0.35 | -0.3 | |||
51 | AT4G03890 | transposable element gene | 0.47 | 0.31 | -0.31 | |||
52 | AT2G26790 | Pentatricopeptide repeat (PPR) superfamily protein | -0.46 | 0.3 | -0.29 | |||
53 | AT5G41890 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.46 | 0.32 | -0.26 | |||
54 | AT5G05660 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
Arabidopsis NF-X like 2, EARLY BIRD, NFX1-like 2 |
-0.46 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
55 | C0227 | Ribose | D-Ribose | D-Ribose | ribose degradation, guanosine nucleotides degradation I, pyrimidine salvage pathway, pyridine nucleotide cycling (plants), adenine and adenosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage II, cis-zeatin biosynthesis, adenosine nucleotides degradation I, pyrimidine ribonucleosides degradation II |
-0.74 | 0.46 | -0.44 | ||
56 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
0.69 | 0.49 | -0.45 | ||
57 | C0023 | 1,6-Anhydro-β-glucose | 1,6-Anhydro-β-D-glucose | Levoglucosan | - | -0.64 | 0.45 | -0.45 |