AT5G37890 : -
Query Information
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AGICode AT5G37890
Description Protein with RING/U-box and TRAF-like domains
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G37890 Protein with RING/U-box and TRAF-like domains 1 0.32 -0.33
2 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.79 0.31 -0.33
3 AT5G15020 SIN3-like 2 SIN3-like 2 -0.79 0.33 -0.31
4 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.79 0.32 -0.32
5 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.78 0.31 -0.32
6 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.31 -0.29
7 AT3G43810 calmodulin 7 calmodulin 7 0.78 0.3 -0.31
8 AT1G20490 AMP-dependent synthetase and ligase family protein -0.77 0.28 -0.3
9 AT2G34590 Transketolase family protein 0.77 0.32 -0.31
10 AT2G03780 Translin family protein 0.76 0.31 -0.31
11 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 0.76 0.32 -0.31
12 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 0.75 0.32 -0.29
13 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 0.75 0.3 -0.33
14 AT5G40600 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.75 0.31 -0.31
15 AT5G61660 glycine-rich protein 0.74 0.33 -0.33
16 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.74 0.3 -0.33
17 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.74 0.32 -0.32
18 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819		 0.73 0.32 -0.32
19 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 0.73 0.32 -0.31
20 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 0.73 0.31 -0.33
21 AT3G44380 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.73 0.33 -0.33
22 AT3G62840 Small nuclear ribonucleoprotein family protein 0.73 0.34 -0.32
23 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a 0.73 0.29 -0.31
24 AT2G34500 cytochrome P450, family 710, subfamily A, polypeptide 1 cytochrome P450, family 710,
subfamily A, polypeptide 1		 -0.73 0.34 -0.31
25 AT1G65650 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH2 0.72 0.31 -0.33
26 AT3G14080 Small nuclear ribonucleoprotein family protein 0.72 0.32 -0.32
27 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.72 0.3 -0.32
28 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.72 0.29 -0.32
29 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.72 0.3 -0.33
30 AT3G60660 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1395 (InterPro:IPR009829); Has 131
Blast hits to 131 proteins in 44 species: Archae - 0;
Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses
- 0; Other Eukaryotes - 3 (source: NCBI BLink).		 0.71 0.33 -0.32
31 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 0.71 0.31 -0.33
32 AT1G36510 Nucleic acid-binding proteins superfamily -0.71 0.32 -0.32
33 AT3G54930 Protein phosphatase 2A regulatory B subunit family protein 0.71 0.33 -0.33
34 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.71 0.3 -0.31
35 AT4G29870 Oligosaccharyltransferase complex/magnesium transporter
family protein		 0.71 0.3 -0.33
36 AT1G24330 ARM repeat superfamily protein -0.7 0.32 -0.28
37 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 0.7 0.31 -0.31
38 AT3G55005 tonneau 1b (TON1b) tonneau 1b 0.69 0.3 -0.3
39 AT5G65240 Leucine-rich repeat protein kinase family protein -0.69 0.33 -0.31
40 AT3G06660 PAPA-1-like family protein / zinc finger (HIT type) family
protein		 0.69 0.31 -0.32
41 AT5G12050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.32 -0.32
42 AT1G34350 unknown protein; Has 192 Blast hits to 192 proteins in 79
species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi -
0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source:
NCBI BLink).		 0.69 0.32 -0.32
43 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.3 -0.31
44 AT2G27970 CDK-subunit 2 CDK-subunit 2 0.69 0.32 -0.31
45 AT3G50350 Protein of unknown function (DUF1685) 0.69 0.3 -0.33
46 AT2G23110 Late embryogenesis abundant protein, group 6 -0.69 0.3 -0.32
47 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.69 0.32 -0.31
48 AT5G45590 Ribosomal protein L35 0.68 0.32 -0.31
49 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.68 0.31 -0.29
50 AT1G05790 lipase class 3 family protein -0.68 0.3 -0.32
51 AT5G06660 Protein of unknown function DUF106, transmembrane 0.68 0.34 -0.31
52 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.68 0.3 -0.31
53 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.67 0.32 -0.33
54 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 0.67 0.31 -0.32
55 AT1G53000 Nucleotide-diphospho-sugar transferases superfamily protein AtCKS, CMP-KDO synthetase, KDSB 0.67 0.3 -0.33
56 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.32 -0.31
57 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.67 0.31 -0.31
58 AT2G19430 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 AtTHO6, DWD (DDB1-binding WD40
protein) hypersensitive to ABA 1,
THO6		 0.67 0.31 -0.29
59 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 -0.67 0.33 -0.34
60 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 -0.66 0.3 -0.31
61 ATMG00400 hypothetical protein ORF157 -0.66 0.31 -0.33
62 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.33 -0.35
63 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 -0.66 0.31 -0.3
64 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 -0.66 0.33 -0.32
65 AT3G58740 citrate synthase 1 citrate synthase 1 -0.66 0.31 -0.32
66 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.66 0.31 -0.32
67 AT5G61910 DCD (Development and Cell Death) domain protein -0.65 0.32 -0.33
68 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.65 0.3 -0.31
69 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta		 -0.65 0.31 -0.3
70 AT2G17110 Protein of unknown function (DUF630 and DUF632) -0.64 0.31 -0.32
71 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 -0.64 0.32 -0.32
72 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.64 0.33 -0.31
73 AT5G56790 Protein kinase superfamily protein -0.64 0.31 -0.33
74 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 -0.64 0.3 -0.31
75 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.31 -0.29
76 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.63 0.3 -0.31
77 ATMG01360 cytochrome oxidase cytochrome oxidase -0.63 0.31 -0.3
78 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.63 0.32 -0.32
79 AT5G42580 cytochrome P450, family 705, subfamily A, polypeptide 12 cytochrome P450, family 705,
subfamily A, polypeptide 12		 -0.63 0.32 -0.35
80 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 -0.63 0.3 -0.32
81 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 -0.63 0.32 -0.31
82 AT3G05670 RING/U-box protein -0.63 0.31 -0.3
83 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.62 0.32 -0.31
84 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 -0.62 0.32 -0.29
85 AT3G25260 Major facilitator superfamily protein -0.62 0.33 -0.32
86 AT1G62914 pentatricopeptide (PPR) repeat-containing protein -0.62 0.32 -0.32
87 AT1G45160 Protein kinase superfamily protein -0.62 0.31 -0.33
88 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 -0.62 0.32 -0.31
89 AT1G42460 transposable element gene -0.62 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
90 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.79 0.45 -0.44 C0105
91 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.74 0.46 -0.43 C0136
92 C0124 Isonicotinic acid - - - -0.64 0.46 -0.48