AT5G37260 : CIRCADIAN 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G37260
Description Homeodomain-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G37260 Homeodomain-like superfamily protein CIRCADIAN 1, REVEILLE 2 1 0.3 -0.29
2 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein		 ATMDAR2 -0.79 0.3 -0.3
3 AT3G01930 Major facilitator superfamily protein -0.76 0.33 -0.32
4 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 0.76 0.3 -0.31
5 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 -0.75 0.31 -0.3
6 AT1G16680 Chaperone DnaJ-domain superfamily protein 0.74 0.31 -0.3
7 AT3G16690 Nodulin MtN3 family protein AtSWEET16, SWEET16 -0.74 0.31 -0.31
8 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 -0.73 0.31 -0.33
9 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like		 0.73 0.31 -0.31
10 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.31 -0.31
11 AT3G53600 C2H2-type zinc finger family protein -0.71 0.3 -0.32
12 AT1G33260 Protein kinase superfamily protein -0.71 0.32 -0.3
13 AT1G53450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14830.2); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.32 -0.32
14 AT2G20760 Clathrin light chain protein -0.71 0.3 -0.32
15 AT4G10390 Protein kinase superfamily protein -0.71 0.31 -0.3
16 AT2G38610 RNA-binding KH domain-containing protein -0.7 0.32 -0.32
17 AT3G54350 Forkhead-associated (FHA) domain-containing protein embryo defective 1967 0.7 0.33 -0.32
18 AT3G13062 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.7 0.34 -0.31
19 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 -0.69 0.28 -0.29
20 AT2G37550 ARF-GAP domain 7 ARF-GAP domain 7, yeast pde1
suppressor 1		 -0.69 0.32 -0.35
21 AT1G25370 Protein of unknown function (DUF1639) -0.69 0.33 -0.31
22 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein 0.69 0.32 -0.31
23 AT2G27580 A20/AN1-like zinc finger family protein -0.69 0.31 -0.3
24 AT1G14360 UDP-galactose transporter 3 ATUTR3, UDP-galactose transporter
3		 -0.68 0.31 -0.32
25 AT2G37940 Arabidopsis Inositol phosphorylceramide synthase 2 Arabidopsis Inositol
phosphorylceramide synthase 2,
enhancing RPW8-mediated HR-like
cell death 1		 -0.68 0.3 -0.31
26 AT3G15400 anther 20 anther 20 0.68 0.31 -0.33
27 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.68 0.32 -0.3
28 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.68 0.3 -0.3
29 AT5G11670 NADP-malic enzyme 2 Arabidopsis thaliana NADP-malic
enzyme 2, NADP-malic enzyme 2		 -0.68 0.32 -0.33
30 AT5G47040 lon protease 2 lon protease 2 0.68 0.32 -0.3
31 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.68 0.31 -0.32
32 AT3G06520 agenet domain-containing protein 0.68 0.33 -0.31
33 AT2G06050 oxophytodienoate-reductase 3 AtOPR3, DELAYED DEHISCENCE 1,
oxophytodienoate-reductase 3		 -0.68 0.33 -0.32
34 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.31 -0.31
35 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 -0.67 0.34 -0.31
36 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.67 0.32 -0.3
37 AT5G40660 ATP12 protein-related -0.67 0.34 -0.33
38 AT4G24330 Protein of unknown function (DUF1682) -0.67 0.3 -0.32
39 AT5G11970 Protein of unknown function (DUF3511) -0.67 0.3 -0.32
40 AT2G18210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits
to 50 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.31
41 AT1G05160 cytochrome P450, family 88, subfamily A, polypeptide 3 ATKAO1, cytochrome P450, family
88, subfamily A, polypeptide 3,
ENT-KAURENOIC ACID OXYDASE 1		 0.67 0.31 -0.32
42 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.66 0.3 -0.33
43 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.66 0.34 -0.33
44 AT5G44660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits
to 462 proteins in 141 species: Archae - 2; Bacteria - 370;
Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other
Eukaryotes - 239 (source: NCBI BLink).		 0.66 0.33 -0.3
45 AT2G07490 transposable element gene 0.66 0.34 -0.32
46 AT3G05910 Pectinacetylesterase family protein -0.66 0.32 -0.32
47 AT4G13340 Leucine-rich repeat (LRR) family protein leucine-rich repeat/extensin 3 -0.66 0.3 -0.31
48 AT3G16270 ENTH/VHS family protein -0.65 0.32 -0.33
49 AT4G13790 SAUR-like auxin-responsive protein family -0.65 0.35 -0.32
50 AT3G56490 HIS triad family protein 3 HISTIDINE TRIAD NUCLEOTIDE-BINDING
1, HIS triad family protein 3		 -0.65 0.33 -0.31
51 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.65 0.32 -0.31
52 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.3 -0.31
53 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 -0.65 0.33 -0.31
54 AT3G07480 2Fe-2S ferredoxin-like superfamily protein -0.65 0.32 -0.31
55 AT5G24340 3'-5' exonuclease domain-containing protein 0.65 0.31 -0.33
56 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 0.65 0.32 -0.35
57 AT5G61790 calnexin 1 ATCNX1, calnexin 1 -0.64 0.32 -0.31
58 AT5G07500 Zinc finger C-x8-C-x5-C-x3-H type family protein PEI1 0.64 0.29 -0.32
59 AT5G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.31
60 AT5G15880 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.32 -0.32
61 ATMG00740 hypothetical protein ORF100A 0.64 0.33 -0.32
62 AT2G47550 Plant invertase/pectin methylesterase inhibitor superfamily -0.64 0.34 -0.31
63 AT5G38510 Rhomboid-related intramembrane serine protease family
protein		 0.64 0.31 -0.31
64 AT2G41460 apurinic endonuclease-redox protein apurinic endonuclease-redox
protein		 0.64 0.31 -0.32
65 AT3G57770 Protein kinase superfamily protein 0.64 0.32 -0.31
66 AT5G07460 peptidemethionine sulfoxide reductase 2 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 2,
peptidemethionine sulfoxide
reductase 2		 -0.64 0.34 -0.28
67 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 0.64 0.31 -0.31
68 AT2G20820 unknown protein; Has 44 Blast hits to 44 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.3 -0.32
69 AT3G28180 Cellulose-synthase-like C4 Cellulose-synthase-like C4,
ATCSLC4, CSLC04,
Cellulose-synthase-like C4,
CELLULOSE-SYNTHASE LIKE C4		 -0.64 0.32 -0.31
70 AT2G20780 Major facilitator superfamily protein -0.63 0.3 -0.31
71 AT2G18830 BEST Arabidopsis thaliana protein match is: RNA-binding
(RRM/RBD/RNP motifs) family protein (TAIR:AT3G15010.2); Has
22 Blast hits to 22 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.31
72 AT1G21100 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 1		 -0.63 0.34 -0.3
73 AT1G30890 Integral membrane HRF1 family protein -0.63 0.33 -0.3
74 AT3G17100 sequence-specific DNA binding transcription factors -0.63 0.33 -0.3
75 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.31 -0.33
76 AT5G37070 Protein of unknown function, DUF538 -0.63 0.31 -0.32
77 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.31 -0.33
78 AT1G78320 glutathione S-transferase TAU 23 glutathione S-transferase TAU 23,
glutathione S-transferase TAU 23		 0.63 0.29 -0.3
79 AT1G11530 C-terminal cysteine residue is changed to a serine 1 C-terminal cysteine residue is
changed to a serine 1, C-terminal
cysteine residue is changed to a
serine 1		 0.63 0.32 -0.31
80 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.63 0.31 -0.31
81 AT5G47910 respiratory burst oxidase homologue D ATRBOHD, respiratory burst oxidase
homologue D		 -0.63 0.3 -0.32
82 AT2G10900 transposable element gene 0.63 0.32 -0.3
83 AT3G02550 LOB domain-containing protein 41 LOB domain-containing protein 41 -0.62 0.31 -0.32
84 AT2G20420 ATP citrate lyase (ACL) family protein -0.62 0.29 -0.33
85 AT3G04210 Disease resistance protein (TIR-NBS class) -0.62 0.29 -0.32
86 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 -0.62 0.3 -0.33
87 AT5G56570 Leucine-rich repeat (LRR) family protein 0.62 0.32 -0.32
88 AT5G47920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.32 -0.32
89 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 -0.62 0.29 -0.32
90 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 -0.62 0.28 -0.31
91 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.62 0.34 -0.3
92 AT1G50250 FTSH protease 1 FTSH protease 1 0.62 0.35 -0.33
93 AT5G55180 O-Glycosyl hydrolases family 17 protein 0.62 0.32 -0.33
94 AT2G46140 Late embryogenesis abundant protein -0.62 0.31 -0.31
95 AT5G51020 crumpled leaf constitutive activator of
AAA-ATPase, CRUMPLED LEAF		 0.61 0.33 -0.34
96 AT5G53660 growth-regulating factor 7 growth-regulating factor 7,
growth-regulating factor 7		 0.61 0.3 -0.33
97 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 0.61 0.33 -0.3
98 AT1G27590 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana
protein match is: phosphatidylinositol 3- and 4-kinase
family protein (TAIR:AT1G27570.1); Has 109 Blast hits to
109 proteins in 38 species: Archae - 0; Bacteria - 0;
Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.61 0.31 -0.31
99 AT1G53090 SPA1-related 4 SPA1-related 4 0.61 0.33 -0.33
100 AT1G60160 Potassium transporter family protein 0.61 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		0.75 0.44 -0.43 C0263