AGICode | AT5G36840 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G36840 | transposable element gene | 1 | 0.35 | -0.33 | |||
2 | AT5G10900 | Calcineurin-like metallo-phosphoesterase superfamily protein |
0.63 | 0.32 | -0.32 | |||
3 | AT1G65340 | cytochrome P450, family 96, subfamily A, polypeptide 3 | cytochrome P450, family 96, subfamily A, polypeptide 3 |
0.6 | 0.32 | -0.3 | ||
4 | AT1G80140 | Pectin lyase-like superfamily protein | -0.58 | 0.32 | -0.31 | |||
5 | AT5G06850 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
0.58 | 0.29 | -0.31 | |||
6 | AT3G24000 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.56 | 0.33 | -0.32 | |||
7 | AT3G43170 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G54330.1); Has 90 Blast hits to 90 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.32 | |||
8 | AT5G04720 | ADR1-like 2 | ADR1-like 2, PHOENIX 21 | -0.55 | 0.33 | -0.32 | ||
9 | AT5G45420 | Duplicated homeodomain-like superfamily protein | membrane anchored MYB | 0.55 | 0.32 | -0.32 | ||
10 | AT1G67500 | recovery protein 3 | recovery protein 3, recovery protein 3 |
-0.54 | 0.33 | -0.33 | ||
11 | AT3G13240 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.53 | 0.33 | -0.33 | |||
12 | AT2G02520 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.53 | 0.33 | -0.32 | |||
13 | AT5G23080 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein |
TOUGH | -0.53 | 0.32 | -0.33 | ||
14 | AT1G29570 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.52 | 0.34 | -0.31 | |||
15 | AT5G18525 | protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases |
-0.52 | 0.31 | -0.33 | |||
16 | AT1G70080 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
0.52 | 0.32 | -0.31 | |||
17 | AT3G17180 | serine carboxypeptidase-like 33 | serine carboxypeptidase-like 33 | -0.52 | 0.33 | -0.32 | ||
18 | AT5G48770 | Disease resistance protein (TIR-NBS-LRR class) family | 0.51 | 0.33 | -0.32 | |||
19 | AT5G28940 | transposable element gene | 0.51 | 0.31 | -0.32 | |||
20 | AT4G04450 | WRKY family transcription factor | AtWRKY42, WRKY42 | 0.51 | 0.32 | -0.33 | ||
21 | AT4G11660 | winged-helix DNA-binding transcription factor family protein |
AT-HSFB2B, HEAT SHOCK TRANSCRIPTION FACTOR B2B |
0.5 | 0.31 | -0.31 | ||
22 | AT3G17600 | indole-3-acetic acid inducible 31 | indole-3-acetic acid inducible 31 | 0.5 | 0.32 | -0.32 | ||
23 | AT1G06580 | Pentatricopeptide repeat (PPR) superfamily protein | -0.5 | 0.31 | -0.3 | |||
24 | AT1G07690 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Orthoreovirus membrane fusion p10 (InterPro:IPR009854); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54950.1); Has 11 Blast hits to 11 proteins in 4 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.5 | 0.29 | -0.32 | |||
25 | AT1G03390 | HXXXD-type acyl-transferase family protein | -0.49 | 0.3 | -0.33 | |||
26 | AT5G17540 | HXXXD-type acyl-transferase family protein | 0.49 | 0.32 | -0.31 | |||
27 | AT2G24780 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.33 | -0.33 | |||
28 | AT2G47280 | Pectin lyase-like superfamily protein | -0.48 | 0.3 | -0.33 | |||
29 | AT1G13980 | sec7 domain-containing protein | EMBRYO DEFECTIVE 30, GNOM, VASCULAR NETWORK 7 |
-0.48 | 0.31 | -0.31 | ||
30 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | -0.48 | 0.32 | -0.33 | ||
31 | AT1G61630 | equilibrative nucleoside transporter 7 | ATENT7, equilibrative nucleoside transporter 7 |
0.48 | 0.31 | -0.32 | ||
32 | AT5G32600 | transposable element gene | 0.47 | 0.33 | -0.34 | |||
33 | AT3G44730 | kinesin-like protein 1 | AtKIN14h, ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 |
0.47 | 0.31 | -0.34 | ||
34 | AT4G07750 | transposable element gene | 0.47 | 0.3 | -0.32 | |||
35 | AT4G24430 | Rhamnogalacturonate lyase family protein | -0.46 | 0.31 | -0.31 | |||
36 | AT2G24340 | sequence-specific DNA binding transcription factors | 0.46 | 0.31 | -0.33 | |||
37 | AT2G29880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 260 Blast hits to 212 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 240; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.46 | 0.3 | -0.29 | |||
38 | AT4G22160 | unknown protein; Has 42 Blast hits to 42 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.46 | 0.32 | -0.34 | |||
39 | AT4G02310 | Galactose oxidase/kelch repeat superfamily protein | 0.46 | 0.33 | -0.34 | |||
40 | AT4G07730 | transposable element gene | -0.46 | 0.33 | -0.29 | |||
41 | AT4G35660 | Arabidopsis protein of unknown function (DUF241) | -0.45 | 0.3 | -0.32 | |||
42 | AT5G04640 | AGAMOUS-like 99 | AGAMOUS-like 99 | 0.45 | 0.29 | -0.32 | ||
43 | AT2G30940 | Protein kinase superfamily protein | -0.44 | 0.31 | -0.32 | |||
44 | AT4G36510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.44 | 0.33 | -0.3 | |||
45 | AT5G35960 | Protein kinase family protein | -0.44 | 0.31 | -0.32 | |||
46 | AT5G26070 | hydroxyproline-rich glycoprotein family protein | -0.43 | 0.33 | -0.32 | |||
47 | AT1G10160 | transposable element gene | -0.43 | 0.3 | -0.32 | |||
48 | AT4G05510 | transposable element gene | -0.42 | 0.29 | -0.31 | |||
49 | AT4G28110 | myb domain protein 41 | myb domain protein 41, myb domain protein 41 |
-0.42 | 0.31 | -0.31 | ||
50 | AT5G48090 | EDM2-like protein1 | EDM2-like protein1 | -0.42 | 0.31 | -0.32 | ||
51 | AT5G14170 | SWIB/MDM2 domain superfamily protein | CHC1 | -0.42 | 0.31 | -0.32 | ||
52 | AT4G03380 | BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G03530.1); Has 29 Blast hits to 29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.41 | 0.32 | -0.31 |