AT5G35840 : phytochrome C
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G35840
Description phytochrome C
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G35840 phytochrome C phytochrome C 1 0.32 -0.33
2 AT1G64270 transposable element gene 0.71 0.33 -0.31
3 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 0.71 0.34 -0.3
4 AT5G24760 GroES-like zinc-binding dehydrogenase family protein -0.67 0.31 -0.32
5 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 0.67 0.31 -0.31
6 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.66 0.31 -0.31
7 AT1G49630 presequence protease 2 presequence protease 2,
presequence protease 2		 0.65 0.33 -0.32
8 AT3G45970 expansin-like A1 expansin-like A1, ATEXPL1, ATHEXP
BETA 2.1, expansin-like A1,
EXPANSIN L1		 -0.65 0.33 -0.29
9 AT4G13050 Acyl-ACP thioesterase 0.65 0.34 -0.33
10 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.64 0.33 -0.32
11 AT1G60930 RECQ helicase L4B RECQ helicase L4B, RECQ helicase
L4B, RECQ HELICASE L4B		 0.64 0.31 -0.31
12 AT5G51820 phosphoglucomutase ARABIDOPSIS THALIANA
PHOSPHOGLUCOMUTASE,
phosphoglucomutase, PGM1,
STARCH-FREE 1		 0.64 0.3 -0.33
13 AT5G36930 Disease resistance protein (TIR-NBS-LRR class) family 0.64 0.3 -0.34
14 AT1G60460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; Has
23 Blast hits to 23 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.33 -0.32
15 AT3G45290 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 3,
MILDEW RESISTANCE LOCUS O 3		 0.63 0.31 -0.3
16 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.62 0.29 -0.32
17 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.62 0.33 -0.32
18 AT5G37290 ARM repeat superfamily protein 0.62 0.31 -0.29
19 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 0.61 0.32 -0.31
20 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.34 -0.32
21 AT5G55790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G45163.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.32 -0.32
22 AT1G61240 Protein of unknown function (DUF707) 0.61 0.29 -0.34
23 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.59 0.32 -0.33
24 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.59 0.33 -0.31
25 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.59 0.33 -0.32
26 AT1G66540 Cytochrome P450 superfamily protein 0.59 0.31 -0.34
27 AT1G64300 Protein kinase family protein 0.59 0.3 -0.29
28 AT1G78310 VQ motif-containing protein -0.58 0.31 -0.29
29 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.57 0.3 -0.33
30 AT1G65370 TRAF-like family protein 0.57 0.31 -0.32
31 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein 0.56 0.32 -0.34
32 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.56 0.31 -0.33
33 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 0.56 0.33 -0.33
34 AT1G11160 Transducin/WD40 repeat-like superfamily protein 0.55 0.31 -0.32
35 AT1G77640 Integrase-type DNA-binding superfamily protein -0.54 0.31 -0.32
36 AT3G06895 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.32 -0.32
37 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.54 0.32 -0.31
38 AT1G29050 TRICHOME BIREFRINGENCE-LIKE 38 TRICHOME BIREFRINGENCE-LIKE 38 -0.54 0.32 -0.32
39 AT4G12840 Protein of unknown function (DUF707) 0.54 0.33 -0.33
40 AT1G52100 Mannose-binding lectin superfamily protein 0.53 0.31 -0.3
41 AT4G07360 transposable element gene 0.53 0.31 -0.32
42 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 0.53 0.34 -0.33
43 AT1G64310 Tetratricopeptide repeat (TPR)-like superfamily protein 0.53 0.29 -0.33
44 AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.52 0.33 -0.29
45 AT3G29210 transposable element gene 0.52 0.31 -0.32
46 AT4G22280 F-box/RNI-like superfamily protein -0.52 0.3 -0.32
47 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 0.52 0.33 -0.31
48 AT4G08480 mitogen-activated protein kinase kinase kinase 9 mitogen-activated protein kinase
kinase kinase 9, MAPK/ERK KINASE
KINASE 2		 0.52 0.31 -0.31
49 AT1G15490 alpha/beta-Hydrolases superfamily protein 0.52 0.34 -0.32
50 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 -0.52 0.32 -0.33
51 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.5 0.31 -0.32
52 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein -0.5 0.32 -0.3
53 AT1G76230 unknown protein; Has 26 Blast hits to 18 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.47 0.32 -0.33
54 AT4G23210 cysteine-rich RLK (RECEPTOR-like protein kinase) 13 cysteine-rich RLK (RECEPTOR-like
protein kinase) 13		 -0.47 0.3 -0.32
55 AT4G35540 zinc ion binding;transcription regulators -0.47 0.32 -0.31
56 AT2G19230 Leucine-rich repeat transmembrane protein kinase protein -0.46 0.33 -0.29
57 AT4G30430 tetraspanin9 tetraspanin9 -0.46 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0183 MST_3033.1 - - - 0.86 0.44 -0.45
59 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.85 0.45 -0.48 C0038