AGICode | AT5G36170 |
Description | high chlorophyll fluorescent 109 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G36170 | high chlorophyll fluorescent 109 | ATPRFB, high chlorophyll fluorescent 109 |
1 | 0.32 | -0.32 | ||
2 | AT3G29185 | Domain of unknown function (DUF3598) | 0.93 | 0.33 | -0.32 | |||
3 | AT5G53580 | NAD(P)-linked oxidoreductase superfamily protein | AtPLR1, pyridoxal reductase 1 | 0.93 | 0.32 | -0.3 | ||
4 | AT4G39040 | RNA-binding CRS1 / YhbY (CRM) domain protein | 0.93 | 0.32 | -0.33 | |||
5 | AT3G25805 | unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.92 | 0.33 | -0.32 | |||
6 | AT3G20230 | Ribosomal L18p/L5e family protein | 0.92 | 0.32 | -0.32 | |||
7 | AT4G19100 | Protein of unknown function (DUF3464) | photosynthesis affected mutant 68 | 0.92 | 0.31 | -0.3 | ||
8 | AT4G14870 | secE/sec61-gamma protein transport protein | SECE1 | 0.91 | 0.32 | -0.33 | ||
9 | AT1G60550 | enoyl-CoA hydratase/isomerase D | DHNS, enoyl-CoA hydratase/isomerase D |
0.91 | 0.3 | -0.31 | ||
10 | AT5G10690 | pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein |
0.91 | 0.31 | -0.31 | |||
11 | AT4G25080 | magnesium-protoporphyrin IX methyltransferase | magnesium-protoporphyrin IX methyltransferase |
0.91 | 0.33 | -0.3 | ||
12 | AT4G38160 | Mitochondrial transcription termination factor family protein |
pigment defective 191 | 0.91 | 0.28 | -0.31 | ||
13 | AT5G52970 | thylakoid lumen 15.0 kDa protein | 0.91 | 0.32 | -0.29 | |||
14 | AT4G24750 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.91 | 0.32 | -0.31 | |||
15 | AT5G46420 | 16S rRNA processing protein RimM family | 0.91 | 0.33 | -0.31 | |||
16 | AT2G28605 | Photosystem II reaction center PsbP family protein | 0.9 | 0.31 | -0.3 | |||
17 | AT3G23760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.9 | 0.31 | -0.31 | |||
18 | AT1G08520 | ALBINA 1 | ALB-1V, ALBINA 1, CHLD, PIGMENT DEFECTIVE EMBRYO 166, V157 |
0.9 | 0.31 | -0.33 | ||
19 | AT5G03940 | chloroplast signal recognition particle 54 kDa subunit | 54 CHLOROPLAST PROTEIN, chloroplast signal recognition particle 54 kDa subunit, FIFTY-FOUR CHLOROPLAST HOMOLOGUE, SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT CHLOROPLAST PROTEIN |
0.9 | 0.31 | -0.33 | ||
20 | AT2G41720 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 2654 | 0.9 | 0.31 | -0.31 | ||
21 | AT3G26900 | shikimate kinase like 1 | Arabidopsis thaliana shikimate kinase-like 1, shikimate kinase-like 1 |
0.9 | 0.32 | -0.3 | ||
22 | AT1G53520 | Chalcone-flavanone isomerase family protein | 0.9 | 0.32 | -0.32 | |||
23 | AT1G49380 | cytochrome c biogenesis protein family | 0.9 | 0.35 | -0.31 | |||
24 | AT2G18710 | SECY homolog 1 | SECY homolog 1 | 0.9 | 0.3 | -0.32 | ||
25 | AT2G47910 | chlororespiratory reduction 6 | chlororespiratory reduction 6 | 0.89 | 0.33 | -0.32 | ||
26 | AT1G74070 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.89 | 0.31 | -0.3 | |||
27 | AT1G60600 | UbiA prenyltransferase family protein | ABERRANT CHLOROPLAST DEVELOPMENT 4 | 0.89 | 0.3 | -0.31 | ||
28 | AT3G55040 | glutathione transferase lambda 2 | glutathione transferase lambda 2 | 0.89 | 0.32 | -0.31 | ||
29 | AT4G14890 | 2Fe-2S ferredoxin-like superfamily protein | ferredoxin C 2 | 0.89 | 0.32 | -0.3 | ||
30 | AT4G17740 | Peptidase S41 family protein | 0.89 | 0.34 | -0.3 | |||
31 | AT5G14100 | non-intrinsic ABC protein 14 | ATP-binding cassette I11, ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14, non-intrinsic ABC protein 14 |
0.89 | 0.32 | -0.3 | ||
32 | AT3G51510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.89 | 0.33 | -0.33 | |||
33 | AT1G44000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.89 | 0.3 | -0.29 | |||
34 | AT4G33000 | calcineurin B-like protein 10 | ATCBL10, calcineurin B-like protein 10, SOS3-LIKE CALCIUM BINDING PROTEIN 8 |
0.89 | 0.32 | -0.35 | ||
35 | AT5G02710 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
0.89 | 0.31 | -0.29 | |||
36 | AT3G05410 | Photosystem II reaction center PsbP family protein | 0.88 | 0.32 | -0.35 | |||
37 | AT3G02690 | nodulin MtN21 /EamA-like transporter family protein | 0.88 | 0.31 | -0.32 | |||
38 | AT2G29290 | NAD(P)-binding Rossmann-fold superfamily protein | 0.88 | 0.32 | -0.33 | |||
39 | AT1G18170 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.88 | 0.33 | -0.33 | |||
40 | AT1G64680 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). |
0.88 | 0.29 | -0.33 | |||
41 | AT5G51545 | low psii accumulation2 | low psii accumulation2 | 0.88 | 0.31 | -0.3 | ||
42 | AT1G12800 | Nucleic acid-binding, OB-fold-like protein | 0.88 | 0.33 | -0.32 | |||
43 | AT2G37450 | nodulin MtN21 /EamA-like transporter family protein | 0.88 | 0.3 | -0.31 | |||
44 | AT1G11860 | Glycine cleavage T-protein family | 0.88 | 0.3 | -0.33 | |||
45 | AT1G07440 | NAD(P)-binding Rossmann-fold superfamily protein | 0.88 | 0.31 | -0.32 | |||
46 | AT5G38520 | alpha/beta-Hydrolases superfamily protein | 0.88 | 0.29 | -0.33 | |||
47 | AT2G20890 | photosystem II reaction center PSB29 protein | photosystem II reaction center PSB29 protein, THYLAKOID FORMATION1 |
0.88 | 0.32 | -0.33 | ||
48 | AT4G15110 | cytochrome P450, family 97, subfamily B, polypeptide 3 | cytochrome P450, family 97, subfamily B, polypeptide 3 |
0.88 | 0.33 | -0.33 | ||
49 | AT4G20130 | plastid transcriptionally active 14 | plastid transcriptionally active 14 |
0.87 | 0.3 | -0.3 | ||
50 | AT1G49975 | INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.87 | 0.31 | -0.28 | |||
51 | AT5G39210 | chlororespiratory reduction 7 | CHLORORESPIRATORY REDUCTION 7 | 0.87 | 0.31 | -0.31 | ||
52 | AT2G34640 | plastid transcriptionally active 12 | HEMERA, plastid transcriptionally active 12 |
0.87 | 0.32 | -0.33 | ||
53 | AT1G12250 | Pentapeptide repeat-containing protein | 0.87 | 0.31 | -0.3 | |||
54 | AT4G34830 | Pentatricopeptide repeat (PPR) superfamily protein | MATURATION OF RBCL 1, PIGMENT DEFECTIVE 346 |
0.87 | 0.34 | -0.32 | ||
55 | AT4G17600 | Chlorophyll A-B binding family protein | LIL3:1 | 0.87 | 0.31 | -0.3 | ||
56 | AT3G20680 | Domain of unknown function (DUF1995) | 0.87 | 0.3 | -0.32 | |||
57 | AT2G30390 | ferrochelatase 2 | ATFC-II, FC-II, ferrochelatase 2 | 0.87 | 0.31 | -0.3 | ||
58 | AT2G17033 | pentatricopeptide (PPR) repeat-containing protein | 0.87 | 0.3 | -0.32 | |||
59 | AT3G18680 | Amino acid kinase family protein | 0.87 | 0.31 | -0.32 | |||
60 | AT4G19985 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.87 | 0.33 | -0.3 | |||
61 | AT3G09210 | plastid transcriptionally active 13 | plastid transcriptionally active 13 |
0.87 | 0.31 | -0.31 | ||
62 | AT1G26220 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.87 | 0.31 | -0.33 | |||
63 | AT5G58260 | oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor |
NADH dehydrogenase-like complex N | 0.87 | 0.33 | -0.33 | ||
64 | AT3G19810 | Protein of unknown function (DUF177) | 0.87 | 0.32 | -0.31 | |||
65 | AT5G35790 | glucose-6-phosphate dehydrogenase 1 | glucose-6-phosphate dehydrogenase 1 |
0.87 | 0.34 | -0.31 | ||
66 | AT4G12970 | stomagen | EPFL9, STOMAGEN | 0.87 | 0.3 | -0.31 | ||
67 | AT1G35420 | alpha/beta-Hydrolases superfamily protein | 0.87 | 0.31 | -0.32 | |||
68 | AT2G41340 | RNA polymerase II fifth largest subunit, D | RNA polymerase II fifth largest subunit, D |
0.87 | 0.32 | -0.33 | ||
69 | AT4G30690 | Translation initiation factor 3 protein | 0.86 | 0.3 | -0.33 | |||
70 | AT1G44920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.86 | 0.34 | -0.32 | |||
71 | AT2G44650 | chloroplast chaperonin 10 | chloroplast chaperonin 10, CHLOROPLAST CHAPERONIN 10 |
0.86 | 0.31 | -0.33 | ||
72 | AT1G19150 | photosystem I light harvesting complex gene 6 | LHCA2*1, photosystem I light harvesting complex gene 6 |
0.86 | 0.33 | -0.33 | ||
73 | AT2G35450 | catalytics;hydrolases | 0.86 | 0.32 | -0.31 | |||
74 | AT5G05740 | ethylene-dependent gravitropism-deficient and yellow-green-like 2 |
ATEGY2, ethylene-dependent gravitropism-deficient and yellow-green-like 2 |
0.86 | 0.31 | -0.3 | ||
75 | AT5G01920 | Protein kinase superfamily protein | State transition 8 | 0.86 | 0.32 | -0.31 | ||
76 | AT1G73110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.86 | 0.32 | -0.3 | |||
77 | AT4G16410 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.86 | 0.32 | -0.33 | |||
78 | AT4G10470 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33050.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.86 | 0.35 | -0.31 | |||
79 | AT2G17240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). |
0.86 | 0.32 | -0.32 | |||
80 | AT4G26555 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.86 | 0.32 | -0.32 | |||
81 | AT2G03750 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.86 | 0.33 | -0.31 | |||
82 | AT4G28080 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.86 | 0.32 | -0.34 | |||
83 | AT1G64355 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). |
0.86 | 0.32 | -0.3 | |||
84 | AT2G17972 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.32 | -0.32 | |||
85 | AT4G30620 | Uncharacterised BCR, YbaB family COG0718 | 0.86 | 0.32 | -0.32 | |||
86 | AT3G24430 | ATP binding | HIGH-CHLOROPHYLL-FLUORESCENCE 101 | 0.86 | 0.3 | -0.32 | ||
87 | AT5G52100 | Dihydrodipicolinate reductase, bacterial/plant | chlororespiration reduction 1 | 0.86 | 0.33 | -0.31 | ||
88 | AT5G15390 | tRNA/rRNA methyltransferase (SpoU) family protein | 0.86 | 0.31 | -0.29 | |||
89 | AT4G05020 | NAD(P)H dehydrogenase B2 | NAD(P)H dehydrogenase B2 | -0.82 | 0.31 | -0.3 | ||
90 | AT4G23885 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.8 | 0.31 | -0.32 | |||
91 | AT5G53760 | Seven transmembrane MLO family protein | MILDEW RESISTANCE LOCUS O 11, MILDEW RESISTANCE LOCUS O 11 |
-0.79 | 0.32 | -0.33 | ||
92 | AT3G13310 | Chaperone DnaJ-domain superfamily protein | -0.79 | 0.3 | -0.31 | |||
93 | AT2G47000 | ATP binding cassette subfamily B4 | ATP-binding cassette B4, ARABIDOPSIS P-GLYCOPROTEIN 4, MULTIDRUG RESISTANCE 4, P-GLYCOPROTEIN 4 |
-0.78 | 0.31 | -0.33 | ||
94 | AT3G22850 | Aluminium induced protein with YGL and LRDR motifs | -0.78 | 0.32 | -0.31 | |||
95 | AT2G47800 | multidrug resistance-associated protein 4 | ATP-binding cassette C4, multidrug resistance-associated protein 4, EST3, multidrug resistance-associated protein 4 |
-0.77 | 0.32 | -0.31 | ||
96 | AT3G29310 | calmodulin-binding protein-related | -0.75 | 0.31 | -0.29 | |||
97 | AT5G20960 | aldehyde oxidase 1 | aldehyde oxidase 1, aldehyde oxidase 1, aldehyde oxidase alpha, ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1, ATAO, Arabidopsis thaliana aldehyde oxidase 1 |
-0.74 | 0.3 | -0.31 | ||
98 | AT4G29690 | Alkaline-phosphatase-like family protein | -0.74 | 0.32 | -0.32 | |||
99 | AT5G06860 | polygalacturonase inhibiting protein 1 | POLYGALACTURONASE INHIBITING PROTEIN 1, polygalacturonase inhibiting protein 1 |
-0.74 | 0.3 | -0.35 | ||
100 | AT1G17180 | glutathione S-transferase TAU 25 | glutathione S-transferase TAU 25, glutathione S-transferase TAU 25 |
-0.73 | 0.3 | -0.33 | ||
101 | AT3G48850 | phosphate transporter 3;2 | phosphate transporter 3;2 | -0.73 | 0.33 | -0.33 | ||
102 | AT3G53480 | pleiotropic drug resistance 9 | ATP-binding cassette G37, PLEIOTROPIC DRUG RESISTANCE 9, pleiotropic drug resistance 9, polar auxin transport inhibitor sensitive 1 |
-0.73 | 0.34 | -0.31 | ||
103 | AT2G30130 | Lateral organ boundaries (LOB) domain family protein | ASL5, LBD12, PEACOCK 1 | -0.72 | 0.33 | -0.32 | ||
104 | AT5G20230 | blue-copper-binding protein | blue-copper-binding protein, BLUE COPPER BINDING PROTEIN, blue-copper-binding protein, SENESCENCE ASSOCIATED GENE 14 |
-0.72 | 0.31 | -0.32 | ||
105 | AT1G18390 | Protein kinase superfamily protein | -0.7 | 0.3 | -0.32 | |||
106 | AT5G06300 | Putative lysine decarboxylase family protein | LONELY GUY 7 | -0.69 | 0.31 | -0.31 | ||
107 | AT1G01730 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.35 | -0.32 | |||
108 | AT3G11770 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.69 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
109 | C0133 | Kaempferol-3,7-O-α-dirhamnopyranoside | Kaempferol-3,7-O-α-L-dirhamnopyranoside | Kaempferol-3-rhamnoside-7-rhamnoside | kaempferol glucoside biosynthesis (Arabidopsis) | 0.88 | 0.44 | -0.46 | ||
110 | C0241 | Stigmasterol 3-O-β-D-glucoside | - | Stigmasterol 3-O-β-D-glucoside | - | -0.81 | 0.5 | -0.49 | ||
111 | C0051 | Aconitic acid | cis-Aconitic acid | cis-Aconitate | glutamine biosynthesis III, TCA cycle variation V (plant), glyoxylate cycle, TCA cycle variation III (eukaryotic) |
-0.78 | 0.46 | -0.42 |