AT5G35600 : histone deacetylase7
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G35600
Description histone deacetylase7
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G35600 histone deacetylase7 histone deacetylase7 1 0.32 -0.29
2 AT1G63550 Receptor-like protein kinase-related family protein 0.67 0.32 -0.33
3 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.66 0.3 -0.3
4 AT4G16570 protein arginine methyltransferase 7 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 7,
protein arginine methyltransferase
7		 0.64 0.31 -0.3
5 AT2G31080 transposable element gene 0.63 0.31 -0.3
6 AT4G25040 Uncharacterised protein family (UPF0497) 0.6 0.33 -0.31
7 AT4G04050 transposable element gene 0.6 0.32 -0.32
8 AT1G59530 basic leucine-zipper 4 basic leucine-zipper 4, basic
leucine-zipper 4		 0.6 0.31 -0.3
9 AT1G17160 pfkB-like carbohydrate kinase family protein -0.59 0.33 -0.31
10 AT1G06260 Cysteine proteinases superfamily protein 0.59 0.31 -0.33
11 AT2G41590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits
to 217 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.3
12 AT1G52180 Aquaporin-like superfamily protein 0.59 0.31 -0.3
13 AT1G52970 downregulated in DIF1 11 downregulated in DIF1 11 -0.58 0.32 -0.32
14 AT3G13400 SKU5 similar 13 SKU5 similar 13 0.58 0.32 -0.32
15 AT5G17530 phosphoglucosamine mutase family protein -0.58 0.31 -0.32
16 AT4G07370 transposable element gene 0.57 0.32 -0.32
17 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 0.57 0.3 -0.32
18 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.57 0.28 -0.31
19 AT4G05610 transposable element gene 0.57 0.31 -0.29
20 AT4G24290 MAC/Perforin domain-containing protein -0.56 0.32 -0.3
21 AT5G11570 Major facilitator superfamily protein 0.56 0.31 -0.3
22 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.56 0.34 -0.32
23 AT5G09340 Ubiquitin family protein -0.55 0.31 -0.34
24 AT2G29000 Leucine-rich repeat protein kinase family protein 0.55 0.3 -0.32
25 AT3G28770 Protein of unknown function (DUF1216) -0.54 0.29 -0.3
26 AT1G53810 transposable element gene -0.54 0.32 -0.32
27 AT2G43590 Chitinase family protein -0.53 0.34 -0.33
28 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 -0.53 0.31 -0.32
29 AT4G07540 transposable element gene -0.53 0.33 -0.31
30 AT4G03800 transposable element gene -0.53 0.3 -0.31
31 AT5G28270 transposable element gene 0.53 0.29 -0.34
32 AT2G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function DUF2359, transmembrane
(TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.53 0.34 -0.31
33 AT1G72080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.52 0.35 -0.32
34 AT4G32080 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.34 -0.32
35 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 0.52 0.32 -0.32
36 AT3G05040 ARM repeat superfamily protein HASTY, HASTY 1 -0.52 0.32 -0.32
37 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 0.51 0.32 -0.29
38 AT5G28670 transposable element gene -0.51 0.32 -0.3
39 AT5G17260 NAC domain containing protein 86 NAC domain containing protein 86,
NAC domain containing protein 86		 -0.51 0.33 -0.31
40 AT1G25460 NAD(P)-binding Rossmann-fold superfamily protein -0.51 0.31 -0.33
41 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family -0.5 0.31 -0.29
42 AT3G48080 alpha/beta-Hydrolases superfamily protein -0.5 0.34 -0.33
43 AT5G29020 transposable element gene -0.5 0.3 -0.32
44 AT1G54920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.5 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
45 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.72 0.45 -0.46 C0136
46 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.68 0.39 -0.45 C0091
47 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.66 0.45 -0.43 C0032
48 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.63 0.43 -0.45 C0015
49 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.62 0.44 -0.43 C0027