AT5G24400 : EMBRYO DEFECTIVE 2024
Query Information
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AGICode AT5G24400
Description NagB/RpiA/CoA transferase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G24400 NagB/RpiA/CoA transferase-like superfamily protein EMBRYO DEFECTIVE 2024,
6-PHOSPHOGLUCONOLACTONASE 3		 1 0.31 -0.3
2 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 0.73 0.34 -0.32
3 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 0.72 0.3 -0.33
4 AT4G17245 RING/U-box superfamily protein 0.71 0.32 -0.33
5 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.69 0.32 -0.29
6 AT5G05850 plant intracellular ras group-related LRR 1 plant intracellular ras
group-related LRR 1		 0.67 0.32 -0.32
7 AT3G11200 alfin-like 2 alfin-like 2 0.67 0.32 -0.33
8 AT5G20880 transposable element gene 0.66 0.32 -0.31
9 AT1G12230 Aldolase superfamily protein 0.65 0.32 -0.32
10 AT5G13030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0061
(InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins
in 1211 species: Archae - 8; Bacteria - 2327; Metazoa -
120; Fungi - 134; Plants - 48; Viruses - 0; Other
Eukaryotes - 2409 (source: NCBI BLink).		 0.65 0.3 -0.3
11 AT1G70250 receptor serine/threonine kinase, putative -0.64 0.31 -0.3
12 AT2G31160 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 3,
ORGAN BOUNDARY 1		 -0.64 0.31 -0.31
13 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.33
14 AT3G20970 NFU domain protein 4 ARABIDOPSIS THALIANA NFU DOMAIN
PROTEIN 2, NFU domain protein 4		 0.64 0.32 -0.33
15 AT1G65370 TRAF-like family protein -0.64 0.31 -0.29
16 AT5G50130 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.31 -0.31
17 AT2G19300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.31 -0.31
18 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.63 0.31 -0.32
19 AT5G41400 RING/U-box superfamily protein -0.63 0.33 -0.32
20 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B 0.62 0.3 -0.31
21 AT4G11840 phospholipase D gamma 3 phospholipase D gamma 3 -0.62 0.29 -0.29
22 AT1G14570 UBX domain-containing protein 0.61 0.29 -0.33
23 AT2G18450 succinate dehydrogenase 1-2 succinate dehydrogenase 1-2 0.61 0.32 -0.31
24 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.61 0.3 -0.3
25 AT1G78310 VQ motif-containing protein 0.61 0.31 -0.3
26 AT4G17770 trehalose phosphatase/synthase 5 trehalose phosphatase/synthase 5,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S5, trehalose phosphatase/synthase
5		 -0.6 0.31 -0.32
27 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.33
28 AT5G18930 Adenosylmethionine decarboxylase family protein BUSHY AND DWARF 2, SAMDC4 -0.6 0.33 -0.32
29 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.6 0.31 -0.3
30 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 0.6 0.32 -0.3
31 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 0.59 0.34 -0.3
32 AT1G50040 Protein of unknown function (DUF1005) 0.59 0.31 -0.31
33 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 -0.59 0.33 -0.32
34 AT1G74440 Protein of unknown function (DUF962) -0.59 0.33 -0.32
35 AT1G35860 translocon outer membrane complex 75-I translocon outer membrane complex
75-I		 -0.58 0.32 -0.32
36 AT3G56240 copper chaperone copper chaperone 0.58 0.32 -0.33
37 AT5G10420 MATE efflux family protein -0.58 0.32 -0.31
38 AT4G14940 amine oxidase 1 amine oxidase 1, amine oxidase 1 0.58 0.3 -0.31
39 AT5G47780 galacturonosyltransferase 4 galacturonosyltransferase 4 0.57 0.3 -0.31
40 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37		 -0.57 0.32 -0.31
41 AT3G11930 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.57 0.35 -0.34
42 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.55 0.33 -0.3
43 AT2G32440 ent-kaurenoic acid hydroxylase 2 ARABIDOPSIS ENT-KAURENOIC ACID
HYDROXYLASE 2, CYP88A4,
ent-kaurenoic acid hydroxylase 2		 -0.55 0.29 -0.28
44 AT4G17585 Aluminium activated malate transporter family protein -0.55 0.32 -0.32
45 AT5G11400 Protein kinase superfamily protein -0.55 0.32 -0.29
46 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 -0.55 0.31 -0.33
47 AT2G20625 Protein of unknown function (DUF626) -0.55 0.32 -0.32
48 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 -0.54 0.3 -0.31
49 AT4G35985 Senescence/dehydration-associated protein-related -0.54 0.31 -0.31
50 AT1G48800 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.54 0.33 -0.31
51 AT2G30380 Plant protein of unknown function (DUF641) -0.54 0.35 -0.32
52 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 -0.53 0.3 -0.31
53 AT5G26980 syntaxin of plants 41 ATSYP41, ATTLG2A, syntaxin of
plants 41		 -0.53 0.32 -0.31
54 AT5G54610 ankyrin ankyrin -0.53 0.29 -0.32
55 AT2G46730 pseudogene, similar to 68 kDa protein, blastp match of 68%
identity and 4.7e-17 P-value to
GP|7271113|emb|CAB81547.1||AJ276420 68 kDa protein {Cicer
arietinum}		 -0.53 0.33 -0.32
56 AT5G60440 AGAMOUS-like 62 AGAMOUS-like 62 -0.53 0.34 -0.32
57 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 -0.53 0.33 -0.29
58 AT1G51920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED
DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.32 -0.33
59 AT5G12910 Histone superfamily protein -0.51 0.31 -0.32
60 AT5G25120 ytochrome p450, family 71, subfamily B, polypeptide 11 ytochrome p450, family 71,
subfamily B, polypeptide 11		 -0.51 0.33 -0.32
61 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 -0.51 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0207 Phosphatidylglycerol-34:5 - - - 0.76 0.43 -0.45
63 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.71 0.48 -0.48 C0038