AT5G24350 : -
Query Information
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AGICode AT5G24350
Description CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 1 0.32 -0.31
2 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 0.83 0.34 -0.32
3 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 0.8 0.3 -0.34
4 AT1G73980 Phosphoribulokinase / Uridine kinase family 0.78 0.31 -0.33
5 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.78 0.33 -0.32
6 AT3G01100 hypothetical protein 1 ARABIDOPSIS THALIANA HYPOTHETICAL
PROTEIN 1, hypothetical protein 1		 0.77 0.31 -0.31
7 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.76 0.3 -0.34
8 AT2G07505 zinc ion binding -0.76 0.33 -0.31
9 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.75 0.29 -0.32
10 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.75 0.31 -0.33
11 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.74 0.3 -0.34
12 AT5G22850 Eukaryotic aspartyl protease family protein 0.74 0.32 -0.3
13 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1		 -0.74 0.33 -0.31
14 AT5G19310 Homeotic gene regulator 0.74 0.3 -0.31
15 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.74 0.33 -0.3
16 AT5G03970 F-box associated ubiquitination effector family protein -0.73 0.29 -0.32
17 AT1G36510 Nucleic acid-binding proteins superfamily 0.73 0.32 -0.32
18 AT3G56800 calmodulin 3 CALMODULIN 3, calmodulin 3 -0.73 0.35 -0.33
19 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 0.73 0.33 -0.33
20 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 -0.73 0.31 -0.32
21 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.73 0.3 -0.31
22 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.73 0.32 -0.31
23 AT3G27670 ARM repeat superfamily protein RESURRECTION1 0.72 0.33 -0.31
24 AT3G19450 GroES-like zinc-binding alcohol dehydrogenase family
protein		 ATCAD4, CAD, CAD-C, CINNAMYL
ALCOHOL DEHYDROGENASE 4		 -0.72 0.33 -0.32
25 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.72 0.3 -0.32
26 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.72 0.32 -0.3
27 AT3G13360 WPP domain interacting protein 3 WPP domain interacting protein 3 -0.72 0.33 -0.3
28 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 -0.72 0.31 -0.33
29 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 0.71 0.31 -0.32
30 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.71 0.3 -0.3
31 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.71 0.35 -0.3
32 AT2G24950 Protein of Unknown Function (DUF239) -0.71 0.33 -0.3
33 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.71 0.32 -0.31
34 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 0.71 0.32 -0.33
35 AT5G58030 Transport protein particle (TRAPP) component -0.71 0.31 -0.32
36 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.7 0.3 -0.33
37 AT1G08470 strictosidine synthase-like 3 strictosidine synthase-like 3 -0.7 0.31 -0.31
38 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.7 0.31 -0.32
39 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.7 0.32 -0.32
40 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 0.7 0.33 -0.31
41 AT5G65620 Zincin-like metalloproteases family protein 0.7 0.33 -0.33
42 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.69 0.31 -0.3
43 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 0.69 0.33 -0.29
44 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.69 0.31 -0.32
45 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 0.69 0.3 -0.33
46 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 -0.69 0.28 -0.32
47 AT2G27720 60S acidic ribosomal protein family -0.69 0.32 -0.3
48 AT1G72830 nuclear factor Y, subunit A3 ATHAP2C, HAP2C, nuclear factor Y,
subunit A3		 0.69 0.3 -0.3
49 AT2G46560 transducin family protein / WD-40 repeat family protein 0.69 0.3 -0.33
50 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 0.69 0.3 -0.32
51 AT3G62840 Small nuclear ribonucleoprotein family protein -0.69 0.31 -0.33
52 AT3G44780 Cysteine proteinases superfamily protein -0.68 0.33 -0.31
53 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 0.68 0.32 -0.31
54 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 -0.68 0.32 -0.31
55 AT4G12020 protein kinase family protein ATWRKY19, MITOGEN-ACTIVATED
PROTEIN KINASE KINASE KINASE 11,
MAPK/ERK KINASE KINASE 4, WRKY19		 0.68 0.32 -0.32
56 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.68 0.32 -0.31
57 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.31 -0.32
58 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 0.68 0.31 -0.3
59 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.68 0.3 -0.32
60 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.68 0.32 -0.31
61 AT5G19240 Glycoprotein membrane precursor GPI-anchored -0.68 0.33 -0.31
62 AT4G34040 RING/U-box superfamily protein 0.68 0.31 -0.32
63 AT1G44050 Cysteine/Histidine-rich C1 domain family protein -0.68 0.31 -0.31
64 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.67 0.33 -0.33
65 AT4G32640 Sec23/Sec24 protein transport family protein 0.67 0.31 -0.31
66 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 0.67 0.31 -0.32
67 AT3G49720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, Golgi apparatus, plasma
membrane, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.32
68 AT1G02080 transcription regulators 0.67 0.32 -0.33
69 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 -0.67 0.33 -0.3
70 AT1G13920 Remorin family protein 0.67 0.31 -0.33
71 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase -0.67 0.32 -0.28
72 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.29 -0.33
73 AT1G77750 Ribosomal protein S13/S18 family -0.67 0.32 -0.32
74 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.66 0.32 -0.31
75 AT2G20460 transposable element gene 0.66 0.32 -0.32
76 AT5G16210 HEAT repeat-containing protein 0.66 0.32 -0.3
77 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.66 0.3 -0.33
78 AT3G10810 zinc finger (C3HC4-type RING finger) family protein 0.66 0.31 -0.32
79 AT4G35930 F-box family protein -0.66 0.3 -0.31
80 AT1G13380 Protein of unknown function (DUF1218) -0.66 0.31 -0.32
81 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.66 0.32 -0.32
82 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.66 0.31 -0.29
83 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.66 0.3 -0.34
84 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.66 0.31 -0.3
85 AT3G46030 Histone superfamily protein HTB11 -0.66 0.32 -0.31
86 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.66 0.34 -0.33
87 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.65 0.32 -0.29
88 AT4G28440 Nucleic acid-binding, OB-fold-like protein -0.65 0.3 -0.34
89 AT1G30825 Arp2/3 complex, 34 kD subunit p34-Arc ACTIN-RELATED PROTEIN C2A,
DISTORTED TRICHOMES 2		 -0.65 0.3 -0.33
90 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.65 0.3 -0.31
91 AT1G03280 Transcription factor TFIIE, alpha subunit 0.65 0.33 -0.34
92 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 0.65 0.33 -0.31
93 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.32 -0.34
94 AT1G02360 Chitinase family protein -0.65 0.31 -0.3
95 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 -0.65 0.33 -0.32
96 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.65 0.33 -0.3
97 AT5G11000 Plant protein of unknown function (DUF868) -0.65 0.3 -0.31
98 AT1G74840 Homeodomain-like superfamily protein -0.65 0.33 -0.32
99 AT5G06430 Thioredoxin superfamily protein -0.65 0.31 -0.33
100 AT2G33990 IQ-domain 9 IQ-domain 9 -0.65 0.34 -0.3
101 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.65 0.32 -0.29
102 AT1G70310 spermidine synthase 2 spermidine synthase 2 -0.65 0.31 -0.31
103 AT3G47380 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.64 0.32 -0.31
104 AT3G50080 VIER F-box proteine 2 VIER F-box proteine 2 0.64 0.31 -0.32
105 AT2G07360 SH3 domain-containing protein 0.64 0.33 -0.33
106 AT1G50650 Stigma-specific Stig1 family protein -0.64 0.32 -0.34
107 AT1G69030 BSD domain-containing protein -0.64 0.29 -0.33
108 AT3G14080 Small nuclear ribonucleoprotein family protein -0.64 0.31 -0.33
109 AT1G65390 phloem protein 2 A5 phloem protein 2 A5, phloem
protein 2 A5		 -0.64 0.31 -0.34
110 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.3 -0.33
111 AT4G00300 fringe-related protein -0.64 0.31 -0.31
112 AT4G37280 MRG family protein -0.64 0.3 -0.31
113 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 0.64 0.29 -0.33
114 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 0.64 0.33 -0.31
115 AT5G12120 Ubiquitin-associated/translation elongation factor EF1B
protein		 -0.64 0.31 -0.33
116 AT5G23550 Got1/Sft2-like vescicle transport protein family -0.64 0.29 -0.29
117 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein 0.64 0.31 -0.33
118 AT1G58230 binding 0.64 0.32 -0.31
119 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.63 0.31 -0.32
120 AT3G63180 TIC-like TICKLE, TIC-like 0.63 0.31 -0.31
121 AT3G27360 Histone superfamily protein -0.63 0.27 -0.3
122 AT1G67620 Lojap-related protein -0.63 0.32 -0.32
123 AT2G46930 Pectinacetylesterase family protein -0.63 0.3 -0.31
124 AT1G34350 unknown protein; Has 192 Blast hits to 192 proteins in 79
species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi -
0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source:
NCBI BLink).		 -0.63 0.33 -0.29
125 AT2G46230 PIN domain-like family protein -0.63 0.33 -0.34
126 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.63 0.29 -0.33
127 AT4G11800 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.63 0.32 -0.31
128 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.34 -0.31
129 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 0.63 0.31 -0.31
130 AT1G19050 response regulator 7 response regulator 7 -0.63 0.32 -0.31
131 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 -0.63 0.34 -0.31
132 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.63 0.32 -0.3
133 AT4G27350 Protein of unknown function (DUF1223) -0.63 0.29 -0.32
134 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.63 0.31 -0.33
135 AT2G24600 Ankyrin repeat family protein -0.62 0.31 -0.31
136 AT5G45750 RAB GTPase homolog A1C RAB GTPase homolog A1C, RAB GTPase
homolog A1C		 -0.62 0.3 -0.32
137 AT1G80190 partner of SLD five 1 partner of SLD five 1 -0.62 0.28 -0.32
138 AT5G14790 ARM repeat superfamily protein -0.62 0.32 -0.33
139 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 -0.62 0.3 -0.31
140 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.62 0.32 -0.31
141 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 -0.62 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
142 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.77 0.45 -0.47