AT5G24120 : SIGMA FACTOR 5
Query Information
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AGICode AT5G24120
Description sigma factor E
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G24120 sigma factor E SIGMA FACTOR 5, SIGMA FACTOR 5,
sigma factor E		 1 0.34 -0.31
2 AT3G21670 Major facilitator superfamily protein 0.74 0.31 -0.31
3 AT4G00040 Chalcone and stilbene synthase family protein 0.71 0.33 -0.29
4 AT4G15660 Thioredoxin superfamily protein -0.7 0.33 -0.29
5 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.31
6 AT4G34000 abscisic acid responsive elements-binding factor 3 abscisic acid responsive
elements-binding factor 3, AtABF3,
DC3 PROMOTER-BINDING FACTOR 5		 0.69 0.32 -0.32
7 AT4G32840 phosphofructokinase 6 phosphofructokinase 6 -0.69 0.33 -0.3
8 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 -0.68 0.31 -0.33
9 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 0.68 0.32 -0.33
10 AT1G79270 evolutionarily conserved C-terminal region 8 evolutionarily conserved
C-terminal region 8		 0.66 0.32 -0.33
11 AT2G02470 alfin-like 6 alfin-like 6 -0.66 0.29 -0.32
12 AT5G01880 RING/U-box superfamily protein 0.65 0.33 -0.33
13 AT3G51750 unknown protein; Has 15 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.32 -0.31
14 AT4G26550 Got1/Sft2-like vescicle transport protein family -0.65 0.3 -0.29
15 AT3G12150 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2048 (InterPro:IPR019149); Has 421
Blast hits to 334 proteins in 155 species: Archae - 2;
Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43;
Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).		 -0.65 0.31 -0.32
16 AT1G50250 FTSH protease 1 FTSH protease 1 0.65 0.29 -0.32
17 AT2G45010 PLAC8 family protein -0.64 0.3 -0.3
18 AT1G61280 Phosphatidylinositol N-acetylglucosaminyltransferase,
GPI19/PIG-P subunit		 -0.64 0.29 -0.32
19 AT3G23770 O-Glycosyl hydrolases family 17 protein -0.64 0.32 -0.31
20 AT5G03720 heat shock transcription factor A3 ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A3, heat
shock transcription factor A3		 -0.64 0.32 -0.31
21 AT4G36410 ubiquitin-conjugating enzyme 17 ubiquitin-conjugating enzyme 17 -0.64 0.32 -0.33
22 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 0.64 0.32 -0.33
23 AT5G56520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.29 -0.31
24 AT5G39320 UDP-glucose 6-dehydrogenase family protein -0.63 0.33 -0.34
25 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.31 -0.33
26 AT1G11540 Sulfite exporter TauE/SafE family protein -0.63 0.3 -0.33
27 AT3G63270 CONTAINS InterPro DOMAIN/s: Putative harbinger
transposase-derived nuclease (InterPro:IPR006912); BEST
Arabidopsis thaliana protein match is: PIF / Ping-Pong
family of plant transposases (TAIR:AT3G55350.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.63 0.29 -0.3
28 AT1G18400 BR enhanced expression 1 BR enhanced expression 1 -0.63 0.32 -0.33
29 AT3G44735 PHYTOSULFOKINE 3 PRECURSOR PHYTOSULFOKINE 3 PRECURSOR, PSK1,
PHYTOSULFOKINE 3 PRECURSOR		 0.62 0.32 -0.34
30 AT2G26770 plectin-related stomatal closure-related actin
binding protein 1		 0.62 0.31 -0.33
31 AT3G57330 autoinhibited Ca2+-ATPase 11 autoinhibited Ca2+-ATPase 11 -0.62 0.31 -0.31
32 AT3G50110 PTEN 3 Arabidopsis thaliana phosphatase
and TENsin homolog deleted on
chromosome ten 3, PTEN 3,
phosphatase and TENsin homolog
deleted on chromosome ten 2B		 -0.61 0.3 -0.33
33 AT2G21460 transposable element gene -0.61 0.31 -0.32
34 AT4G01280 Homeodomain-like superfamily protein 0.61 0.32 -0.32
35 AT1G03260 SNARE associated Golgi protein family -0.61 0.3 -0.32
36 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.61 0.3 -0.31
37 AT5G39760 homeobox protein 23 homeobox protein 23, homeobox
protein 23, ZINC FINGER
HOMEODOMAIN 10		 -0.61 0.31 -0.32
38 AT3G24670 Pectin lyase-like superfamily protein -0.6 0.32 -0.31
39 AT4G28850 xyloglucan endotransglucosylase/hydrolase 26 ATXTH26, xyloglucan
endotransglucosylase/hydrolase 26		 -0.6 0.33 -0.31
40 AT1G72360 Integrase-type DNA-binding superfamily protein AtERF73, ethylene response factor
73, HYPOXIA RESPONSIVE ERF
(ETHYLENE RESPONSE FACTOR) 1		 -0.6 0.31 -0.33
41 AT4G21940 calcium-dependent protein kinase 15 calcium-dependent protein kinase
15		 0.6 0.3 -0.3
42 AT2G19590 ACC oxidase 1 ACC oxidase 1, ATACO1 -0.6 0.32 -0.32
43 AT2G20520 FASCICLIN-like arabinogalactan 6 FASCICLIN-like arabinogalactan 6 -0.6 0.33 -0.3
44 AT1G75030 thaumatin-like protein 3 thaumatin-like protein 3,
thaumatin-like protein 3		 0.6 0.35 -0.31
45 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.6 0.33 -0.33
46 AT5G64840 general control non-repressible 5 ATP-binding cassette F5, general
control non-repressible 5, general
control non-repressible 5		 0.6 0.31 -0.29
47 AT4G30420 nodulin MtN21 /EamA-like transporter family protein -0.6 0.34 -0.31
48 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A -0.6 0.33 -0.3
49 AT3G48120 unknown protein; Has 22990 Blast hits to 12942 proteins in
666 species: Archae - 8; Bacteria - 739; Metazoa - 13803;
Fungi - 2465; Plants - 1363; Viruses - 116; Other
Eukaryotes - 4496 (source: NCBI BLink).		 0.59 0.32 -0.32
50 AT5G67190 DREB and EAR motif protein 2 DREB and EAR motif protein 2 -0.59 0.31 -0.3
51 AT4G33720 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.59 0.32 -0.3
52 AT2G17120 lysm domain GPI-anchored protein 2 precursor lysm domain GPI-anchored protein 2
precursor		 0.59 0.31 -0.3
53 AT3G23190 HR-like lesion-inducing protein-related -0.59 0.31 -0.31
54 AT3G52290 IQ-domain 3 IQ-domain 3 -0.59 0.31 -0.31
55 AT3G43280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19240.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.59 0.32 -0.31
56 AT1G13890 soluble N-ethylmaleimide-sensitive factor adaptor protein
30		 ATSNAP30, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 30		 -0.58 0.3 -0.33
57 AT1G80510 Transmembrane amino acid transporter family protein -0.58 0.34 -0.3
58 AT1G45170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits
to 62 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.34
59 AT2G37240 Thioredoxin superfamily protein 0.58 0.31 -0.3
60 AT1G07500 unknown protein; Has 4 Blast hits to 4 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.3 -0.32
61 AT4G14000 Putative methyltransferase family protein -0.58 0.3 -0.31
62 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.58 0.3 -0.31
63 AT1G09575 Protein of unknown function (DUF607) -0.58 0.3 -0.32
64 AT1G58110 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.57 0.31 -0.3
65 AT2G26410 IQ-domain 4 IQ-domain 4 -0.57 0.31 -0.3
66 AT2G25800 Protein of unknown function (DUF810) -0.57 0.3 -0.3
67 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.56 0.32 -0.32
68 AT5G06630 proline-rich extensin-like family protein -0.56 0.32 -0.31
69 AT5G19890 Peroxidase superfamily protein -0.56 0.32 -0.3
70 AT5G24070 Peroxidase superfamily protein -0.55 0.3 -0.3
71 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 0.55 0.31 -0.29
72 AT4G09490 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.55 0.31 -0.31
73 AT4G10840 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.31 -0.32
74 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 0.55 0.3 -0.31
75 AT4G02270 root hair specific 13 root hair specific 13 -0.55 0.31 -0.3
76 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 0.55 0.32 -0.32
77 AT3G28180 Cellulose-synthase-like C4 Cellulose-synthase-like C4,
ATCSLC4, CSLC04,
Cellulose-synthase-like C4,
CELLULOSE-SYNTHASE LIKE C4		 -0.55 0.31 -0.31
78 AT1G77240 AMP-dependent synthetase and ligase family protein 0.54 0.32 -0.31
79 AT5G09930 ABC transporter family protein ATP-binding cassette F2 0.54 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		0.78 0.45 -0.45 C0225
81 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.71 0.49 -0.51 C0199
82 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.69 0.48 -0.47 C0151
83 C0121 Isoheptylglucosinolate - - - -0.69 0.41 -0.45
84 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.68 0.46 -0.49
85 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.65 0.47 -0.45
86 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.6 0.36 -0.34
87 C0150 Monogalactosyldiacylgycerol-34:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.59 0.33 -0.34
88 C0157 Monogalactosyldiacylgycerol-36:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.59 0.32 -0.35
89 C0211 PR_MST_2158.8 - - - 0.58 0.45 -0.45
90 C0156 Monogalactosyldiacylgycerol-36:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.56 0.33 -0.32
91 C0203 Phosphatidylglycerol-34:1 - Phosphatidylglycerol-34:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.55 0.33 -0.35