AT5G23450 : long-chain base (LCB) kinase 1
Query Information
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AGICode AT5G23450
Description long-chain base (LCB) kinase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G23450 long-chain base (LCB) kinase 1 long-chain base (LCB) kinase 1,
long-chain base (LCB) kinase 1		 1 0.31 -0.32
2 AT1G32530 RING/U-box superfamily protein 0.78 0.3 -0.32
3 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.32 -0.29
4 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.76 0.32 -0.31
5 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.76 0.31 -0.3
6 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.75 0.3 -0.32
7 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 0.75 0.33 -0.31
8 AT3G20910 nuclear factor Y, subunit A9 nuclear factor Y, subunit A9 0.75 0.31 -0.32
9 AT4G39140 RING/U-box superfamily protein 0.74 0.3 -0.3
10 AT4G31410 Protein of unknown function (DUF1644) 0.74 0.31 -0.31
11 AT5G63370 Protein kinase superfamily protein 0.73 0.32 -0.31
12 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.73 0.31 -0.32
13 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.73 0.31 -0.31
14 AT2G38410 ENTH/VHS/GAT family protein 0.73 0.31 -0.32
15 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.73 0.3 -0.33
16 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.73 0.31 -0.31
17 AT5G04410 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 78, NAC domain containing
protein 2		 0.73 0.3 -0.32
18 AT1G21630 Calcium-binding EF hand family protein 0.72 0.32 -0.31
19 AT1G27200 Domain of unknown function (DUF23) 0.72 0.3 -0.3
20 AT1G80690 PPPDE putative thiol peptidase family protein -0.72 0.31 -0.35
21 AT1G07510 FTSH protease 10 FTSH protease 10 0.71 0.3 -0.32
22 AT1G72390 CONTAINS InterPro DOMAIN/s: Spt20 family
(InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins
in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198;
Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes
- 1797 (source: NCBI BLink).		 0.71 0.32 -0.32
23 AT1G53050 Protein kinase superfamily protein 0.71 0.31 -0.29
24 AT1G50490 ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme 20 -0.71 0.32 -0.31
25 AT3G05220 Heavy metal transport/detoxification superfamily protein 0.71 0.31 -0.34
26 AT1G52320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF632
(InterPro:IPR006867); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF630 and DUF632)
(TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in
62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi -
2; Plants - 427; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.7 0.33 -0.31
27 AT3G09850 D111/G-patch domain-containing protein 0.7 0.33 -0.3
28 AT1G02690 importin alpha isoform 6 importin alpha isoform 6 -0.7 0.31 -0.32
29 AT3G25980 DNA-binding HORMA family protein MITOTIC ARREST-DEFICIENT 2 -0.68 0.32 -0.32
30 AT3G27330 zinc finger (C3HC4-type RING finger) family protein -0.68 0.33 -0.3
31 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.68 0.31 -0.34
32 AT1G68430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast
hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.31
33 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.68 0.32 -0.33
34 AT1G04400 cryptochrome 2 AT-PHH1, ATCRY2, cryptochrome 2,
FHA, PHH1		 0.67 0.32 -0.33
35 AT4G33210 F-box family protein SLOW MOTION 0.67 0.31 -0.29
36 AT3G14010 CTC-interacting domain 4 CTC-interacting domain 4 0.67 0.31 -0.32
37 AT1G04300 TRAF-like superfamily protein 0.67 0.32 -0.32
38 AT2G22260 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.67 0.32 -0.3
39 AT3G18040 MAP kinase 9 MAP kinase 9 0.67 0.32 -0.31
40 ATMG00580 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 0.67 0.31 -0.33
41 AT1G07530 SCARECROW-like 14 ARABIDOPSIS THALIANA GRAS (GAI,
RGA, SCR) 2, GRAS (GAI, RGA, SCR)
2, SCARECROW-like 14		 0.66 0.29 -0.29
42 AT5G10320 unknown protein; Has 54 Blast hits to 53 proteins in 19
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.33
43 AT3G03320 RNA-binding ASCH domain protein -0.66 0.32 -0.3
44 AT5G16820 heat shock factor 3 ARABIDOPSIS HEAT SHOCK FACTOR 3,
ARABIDOPSIS THALIANA CLASS A HEAT
SHOCK FACTOR 1B, heat shock factor
3, CLASS A HEAT SHOCK FACTOR 1B		 0.66 0.3 -0.33
45 AT3G20290 EPS15 homology domain 1 EPS15 homology domain 1, EPS15
homology domain 1		 0.66 0.32 -0.33
46 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.31 -0.31
47 AT1G77600 ARM repeat superfamily protein 0.66 0.33 -0.32
48 AT2G04880 zinc-dependent activator protein-1 ATWRKY1, WRKY1, zinc-dependent
activator protein-1		 0.65 0.31 -0.33
49 AT4G14220 RING-H2 group F1A RING-H2 group F1A 0.65 0.3 -0.33
50 AT3G19590 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.1		 -0.65 0.3 -0.32
51 AT2G41140 CDPK-related kinase 1 ATCBK3, ATCRK1, CDPK-related
kinase 1		 0.65 0.3 -0.32
52 AT1G76310 CYCLIN B2;4 CYCLIN B2;4 -0.65 0.3 -0.3
53 AT2G44200 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA
splicing factor		 0.65 0.3 -0.31
54 AT5G01290 mRNA capping enzyme family protein 0.65 0.3 -0.34
55 AT4G25970 phosphatidylserine decarboxylase 3 phosphatidylserine decarboxylase 3 0.65 0.32 -0.32
56 AT1G73620 Pathogenesis-related thaumatin superfamily protein -0.65 0.33 -0.32
57 AT1G47410 unknown protein; Has 26 Blast hits to 26 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.33 -0.32
58 AT3G09320 DHHC-type zinc finger family protein 0.64 0.32 -0.31
59 AT4G25580 CAP160 protein 0.64 0.3 -0.32
60 AT1G70710 glycosyl hydrolase 9B1 glycosyl hydrolase 9B1, CELLULASE
1, glycosyl hydrolase 9B1		 -0.64 0.3 -0.35
61 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.64 0.32 -0.32
62 AT2G42100 Actin-like ATPase superfamily protein -0.64 0.29 -0.3
63 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.63 0.31 -0.33
64 AT2G40640 RING/U-box superfamily protein -0.63 0.3 -0.31
65 AT5G50380 exocyst subunit exo70 family protein F1 exocyst subunit exo70 family
protein F1, exocyst subunit exo70
family protein F1		 0.63 0.31 -0.3
66 AT5G18190 Protein kinase family protein 0.63 0.31 -0.3
67 AT4G24480 Protein kinase superfamily protein 0.63 0.31 -0.32
68 AT1G76540 cyclin-dependent kinase B2;1 cyclin-dependent kinase B2;1 -0.63 0.32 -0.31
69 AT5G22450 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.3 -0.3
70 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.63 0.31 -0.32
71 AT1G01650 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 ARABIDOPSIS THALIANA SIGNAL
PEPTIDE PEPTIDASE-LIKE 4, SIGNAL
PEPTIDE PEPTIDASE-LIKE 4		 0.63 0.32 -0.31
72 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13		 -0.63 0.33 -0.32
73 AT5G11540 D-arabinono-1,4-lactone oxidase family protein -0.62 0.32 -0.31
74 AT1G28420 homeobox-1 homeobox-1 0.62 0.34 -0.31
75 AT5G19900 PRLI-interacting factor, putative 0.62 0.33 -0.32
76 AT4G11110 SPA1-related 2 SPA1-related 2 0.62 0.31 -0.31
77 AT3G16830 TOPLESS-related 2 TOPLESS-related 2 0.62 0.32 -0.33
78 AT3G02990 heat shock transcription factor A1E heat shock transcription factor
A1E, heat shock transcription
factor A1E		 0.62 0.31 -0.33
79 AT5G25130 cytochrome P450, family 71, subfamily B, polypeptide 12 cytochrome P450, family 71,
subfamily B, polypeptide 12		 -0.62 0.32 -0.3
80 AT1G27630 cyclin T 1;3 cyclin T 1;3 0.62 0.31 -0.31
81 AT1G62560 flavin-monooxygenase glucosinolate S-oxygenase 3 flavin-monooxygenase glucosinolate
S-oxygenase 3		 -0.61 0.33 -0.3
82 AT1G28400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins
in 668 species: Archae - 72; Bacteria - 1460; Metazoa -
1191; Fungi - 1038; Plants - 174; Viruses - 64; Other
Eukaryotes - 41375 (source: NCBI BLink).		 -0.61 0.31 -0.34
83 AT4G22790 MATE efflux family protein -0.61 0.31 -0.29
84 AT1G47210 cyclin-dependent protein kinase 3;2 cyclin-dependent protein kinase
3;2		 -0.61 0.32 -0.31
85 AT5G40320 Cysteine/Histidine-rich C1 domain family protein -0.6 0.32 -0.3
86 AT3G62280 GDSL-like Lipase/Acylhydrolase superfamily protein -0.6 0.32 -0.29
87 AT2G35210 root and pollen arfgap AGD10, MATERNAL EFFECT EMBRYO
ARREST 28, root and pollen arfgap		 -0.6 0.31 -0.32
88 AT4G35620 Cyclin B2;2 Cyclin B2;2 -0.6 0.32 -0.32
89 AT3G19184 AP2/B3-like transcriptional factor family protein -0.6 0.32 -0.33
90 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase -0.59 0.31 -0.32
91 AT3G48210 CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to
194 proteins in 72 species: Archae - 0; Bacteria - 4;
Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.59 0.31 -0.31
92 AT3G30150 transposable element gene -0.59 0.33 -0.32